DY258873

Overview
NameDY258873
Unique NameDY258873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length841
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: PHAB_ACISR (Acetoacetyl-CoA reductase OS=Acinetobacter sp. (strain RA3849) GN=phaB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.454e-13
Identity = 58/205 (28.29%), Postives = 94/205 (45.85%), Query Frame = 1
Query:   10 ESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFER---VLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            E    S+  +V  D+ N      AI + +A  G++D++ NNAGI     TR    +K  +E+   V+  N+  +F   +     M+  +SG I+                Y  +K  ++G TK  A E  +  I VN ++P   ATP+ T+      ED+   + +   L+ +    E IA A +YL S+   YV+G  L I+GG
Sbjct:   50 EGFQDSDVRFVLTDLNNHEAATAAIQEAIAAEGRVDVLVNNAGI-----TRDATFKKMSYEQWSQVIDTNLKTLFTVTQPVFNKMLEQKSGRIVNISSVNGLKGQFGQANYSASKAGIIGFTKALAQEGARSNICVNVVAPGYTATPMVTAM----REDVIKSIEAQIPLQRLAAPAE-IAAAVMYLVSEHGAYVTGETLSINGG 244          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHMA_FLAS1 (N-acylmannosamine 1-dehydrogenase OS=Flavobacterium sp. (strain 141-8) PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.454e-13
Identity = 59/201 (29.35%), Postives = 96/201 (47.76%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPA------RSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDL-EGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFT 621
            + CD+ + + I  A+   VA  G LDI+     + G      +D   AD++R + VN+TG FL  +  AR M+ A      RS  I+                Y  AK  V  LT+  AV+L + GI VN ++P  +   +  +  G ++  L E  ++  A   G     E++A AA++LA D + +++G  + IDGG +
Sbjct:   64 IACDLADRAAIDAAMADAVARLGGLDILVAGGALKGGTGN-FLDLSDADWDRYVDVNMTGTFLTCRAGARAMVAAGAGKDGRSARIITIGSVNSFMAEPEAAAYVAAKGGVAMLTRAMAVDLARHGILVNMIAPGPV--DVTGNNTGYSEPRLAEQVLDEVA--LGRPGLPEEVATAAVFLAEDGSSFITGSTITIDGGLS 259          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHBA_BACSU (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Bacillus subtilis GN=dhbA PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.454e-13
Identity = 57/197 (28.93%), Postives = 91/197 (46.19%), Query Frame = 1
Query:   49 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLK-GVTLRT----EDIAYAALYLASDEAKYVSGHNLFIDGGFTI 624
            DV + + I     +     G +DI+ N AG+        + +E  ++E   SVN TGVF   +  ++ M+  RSGSI+                Y  +K A +  TK   +EL ++ IR N +SP +  T +  S     +   +    S    K G+ L+      DIA A L+L S +A +++ HNL +DGG T+
Sbjct:   65 DVRDSAAIDEITARIEREMGPIDILVNVAGVLRPGLIHSLSDE--EWEATFSVNSTGVFNASRSVSKYMMDRRSGSIVTVGSNAAGVPRTSMAAYASSKAAAVMFTKCLGLELAEYNIRCNIVSPGSTETDMQWSLWADENGAEQVIKGSLETFKTGIPLKKLAKPSDIADAVLFLVSGQAGHITMHNLCVDGGATL 259          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.205e-13
Identity = 58/193 (30.05%), Postives = 96/193 (49.74%), Query Frame = 1
Query:   49 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEA-KYVSGHNLFIDGGFTI 624
            DV+ E  ++  I   V   G +DI+ NNAGI       ++  +K+ ++ V+ +N+TGVFL  + AA++M+  + G I+                Y  AK  V+G TK  A E     I VN ++P  +++ + TS +G   +D+   +     L G   + E++A    +LA + A  YV+G    IDGG T+
Sbjct:  135 DVSKEEDVEAMIKTAVDAWGTVDILVNNAGI--TRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDM-TSKLG---DDINKKILETIPL-GRYGQPEEVAGLVEFLAINPASSYVTGQVFTIDGGMTM 320          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_BUCAI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=fabG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.205e-13
Identity = 50/194 (25.77%), Postives = 90/194 (46.39%), Query Frame = 1
Query:   49 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTL-RTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIV 627
            ++ N   I   I +       +DI+ NNAGI   N   +++ +  +++ V+  N++ VF  +K   R MI  R G I+                Y  +K  ++G  K+ A+E+   GI VN +SP  + T        I       +    +N+      + E++A A ++LAS +A Y++GH L ++GG  ++
Sbjct:   59 NLKNIDSITEKIQEIYKKKHSIDILINNAGIKEDNL--LVNMKSTEWDDVIKTNLSSVFHLVKSVIRSMIKKRQGRIITIGSVIAYTGNKGQVNYSASKSGLIGFHKSLALEVASKGITVNIVSPGLIKTNFTEKLNSIQ------YQKYLSNIPMKRFGQKEEVADAVIFLASKKASYITGHTLHVNGGMYMI 244          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: Y4VI_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4vI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01150 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 52/188 (27.66%), Postives = 90/188 (47.87%), Query Frame = 1
Query:  109 KLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTL----RTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIVNPSLGMFQYPD 660
            +++++ NNAGIG        D    DF+R L++N+ G +      A++M P    +I+                Y  +K  ++ +TK+ A      GIRV  ++P  + TP+      + + +  G ++ +A  + V L    R ++IA A  +LAS +A Y++G  L +DGG+  VN   G  Q  D
Sbjct:   83 RIEVLVNNAGIG-PTMAATADTALEDFQRALAINLVGAYSVACETAKLMKPG--AAIVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTPM------VAELERAGKLDVSAIRRRVPLGRIARPDEIARAVRFLASAQASYITGSTLVVDGGWMSVNQPGGAHQAQD 261          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: KDUD_BACSU (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Bacillus subtilis GN=kduD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 59/205 (28.78%), Postives = 102/205 (49.76%), Query Frame = 1
Query:    4 VVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGF 618
            +VE  G   +S+   D++    IK++  +      ++DI+ NNAGI   ++ +  D  + +++ VL+VN+  +F+  + A R M+    G I+                Y  +KHAV GLTK+ A E    GI+VN ++P  ++T    +   I D++            G   + +DI   A++LAS  + YV+GH L +DGG+
Sbjct:   54 LVEQEGRIFTSFT-LDMSKPEAIKDSAAELFENR-QIDILVNNAGI--IHREKAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKRGHGKIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYIST---ANTKPIRDDEKRNEDILKRIPAGRWGQADDIGGTAVFLASRASDYVNGHILAVDGGW 251          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: GRDH_ORYSJ (Glucose and ribitol dehydrogenase homolog OS=Oryza sativa subsp. japonica GN=Os05g0140800 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 58/211 (27.49%), Postives = 97/211 (45.97%), Query Frame = 1
Query:   19 GTSNSSYVHCDVTNESHIKNAIDQTVATHG-KLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSG------SILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIVN 630
            G  +   +  D+  + + +  +D+    +G  +DI+ NNA      +  I D  + D ERV   N+   F   KHA + M   R G      SI+                Y   K A++  T+  A++L + GIRVN ++P  + TPL  +     +E +  F +      G   +  ++A + ++LASD+A Y+SG  L ++GG  IVN
Sbjct:   95 GAKDPMAIPADLGYDDNCRKVVDEVAGAYGGAIDILVNNAA-EQYERPSITDITEDDLERVFRTNIFSYFFMSKHAVKRMRDRRGGAGAGGCSIINTSSINAYKGNKTLLDYTATKGAIVAFTRALALQLAEEGIRVNGVAPGPIWTPLIPA--SFAEEKVRQFGSQVP--MGRAGQPSEVAPSFVFLASDDASYMSGQMLHVNGG-VIVN 299          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 51/192 (26.56%), Postives = 91/192 (47.40%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            V CDVT+ + +  A  +     G ++++  NAGI        +  E+  FE V++ N+TG F   + A+R M   R G I+                Y  AK  ++G+ ++ + EL + G+  N ++P  + T +  +     DE ++         K V    E++A A  +LAS++A Y++G  + +DGG
Sbjct:   66 VQCDVTDSAAVDRAFKEVEEHQGPVEVLVANAGISKDAFLMRMTEER--FEEVINTNLTGAFRCAQRASRTMQRKRFGRIIFIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEMTRAL----DERIQAGALDFIPAKRVGT-AEEVAGAVSFLASEDASYIAGAVIPVDGG 250          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHRS4_MOUSE (Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 55/190 (28.95%), Postives = 89/190 (46.84%), Query Frame = 1
Query:   46 CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            C V      +  I   +  H  +DI+ +NA +       ++D  +  +++VLS+NVT   + IK     M     GS++                Y  +K A+LGLTKN A EL    IRVNCL+P  + T    S V   ++  E F+  A  ++ +  + ED A    +L S++A Y++G  + + GG
Sbjct:   70 CHVGKAEDREKLITTALKRHRGIDILVSNAAVNPFFGN-LMDVTEEVWDKVLSINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPGLIKTRF--SSVLWEEKAREDFIKEAMQIRRLG-KPEDCAGIVSFLCSEDASYINGETVVVGGG 255          
The following BLAST results are available for this feature:
BLAST of DY258873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
PHAB_ACISR2.454e-1328.29Acetoacetyl-CoA reductase OS=Acinetobacter sp. (st... [more]
DHMA_FLAS12.454e-1329.35N-acylmannosamine 1-dehydrogenase OS=Flavobacteriu... [more]
DHBA_BACSU2.454e-1328.932,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS... [more]
FABG_CUPLA3.205e-1330.053-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
FABG_BUCAI3.205e-1325.773-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
Y4VI_RHISN4.186e-1327.66Uncharacterized short-chain type dehydrogenase/red... [more]
KDUD_BACSU4.186e-1328.782-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=B... [more]
GRDH_ORYSJ4.186e-1327.49Glucose and ribitol dehydrogenase homolog OS=Oryza... [more]
FABG_MYCS24.186e-1326.563-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
DHRS4_MOUSE4.186e-1328.95Dehydrogenase/reductase SDR family member 4 OS=Mus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258873 ID=DY258873; Name=DY258873; organism=Citrus clementina; type=EST; length=841bp
TCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTCCATTGCGA
TGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAACCGTTGCAA
CTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAGGCGGCGCT
AACAAGACCCGCATAATCGACAATGAAAAGGCCGATTTCGAGCGTGTCCT
GAGTGTAAATGTCACCGGAGTTTTCTTGGGCATCAAGCATGCTGCTCGTG
TCATGATTCCGGCTCGCAGTGGCAGCATTCTTTCAACTGCTAGCGTTAGC
TCAAGGGTTGGTGCTGCTGCCTCACATGCATACTGTTGTGCAAAACATGC
TGTTTTAGGACTCACCAAAAATGCTGCTGTTGAGCTAGGCCAATTTGGGA
TTAGGGTGAATTGCTTGTCACCTTATGCTCTTGCAACACCTTTGGCTACC
AGTTTTGTTGGGATTACCGATGAGGATCTGGAAGGTTTTATGAATTCAGC
GGCTAACCTTAAGGGTGTGACTTTAAGGACCGAAGATATTGCATATGCAG
CTCTTTATCTAGCGAGTGATGAGGCGAAGTATGTGAGTGGACACAATCTT
TTCATTGACGGAGGTTTCACTATTGTCAATCCCTCCCTCGGAATGTTTCA
GTACCCAGATTCTTGATCGAGTTAGTTAATTTCATCAAGGTTTTTTCCCA
TTTGAGTGGGGAAAAAAAAAACTCTGTTCAAATAATTTCATATTTGATCC
TTGATATCGAATGAAACAAAATTGAACAAGTTTTTTTTCATTCCTAGACT
CCTTAAAAAAGAAATTATTTCCAAAACGAAACCTTGAGTTT
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