DY258875

Overview
NameDY258875
Unique NameDY258875
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1058
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_METKA (Inorganic pyrophosphatase OS=Methanopyrus kandleri GN=ppa PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 5.140e-41
Identity = 78/169 (46.15%), Postives = 110/169 (65.09%), Query Frame = 2
Query:  284 WHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 790
            W DLE GP  P +   VIEI +GS+ KYE D++ G   +DRVLYS   YP +YGFIPRTL +D DPLD+L+IMQ+P  PGC + A+ IGLM M+D  ++DDK++AV  +DP ++   D+ ++P H L EI   F +YK+ E KE  V  +  A  A  ++  ++ LY +
Sbjct:    5 WKDLEPGPNPPDVVYAVIEIPRGSRNKYEYDEERGFFKLDRVLYSPFHYPLDYGFIPRTLYDDGDPLDILVIMQDPTFPGCVIEARPIGLMKMLDDSDQDDKVLAVPTEDPRFKDVKDLDDVPKHLLDEIAHMFSEYKRLEGKETEVLGWEGADAAKEAIVHAIELYEE 173          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_PYRFU (Inorganic pyrophosphatase OS=Pyrococcus furiosus GN=ppa PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.495e-40
Identity = 79/171 (46.20%), Postives = 116/171 (67.84%), Query Frame = 2
Query:  278 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 790
            +P+HDLE GP  P++   +IEI KGS+ KYELDKK+GL+ +DRVLYS   YP +YG IPRT  ED+DP D+++IM+EPV P   + A+ IGL  MID G+KD K++AV  +DP ++ + DI ++P   L EI  FF+ YK+ + KE+ V  +  A  A   + +++ +Y +
Sbjct:    2 NPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAIEMYKE 172          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_THELI (Inorganic pyrophosphatase OS=Thermococcus litoralis GN=ppa PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.953e-40
Identity = 79/171 (46.20%), Postives = 115/171 (67.25%), Query Frame = 2
Query:  278 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 790
            +P+HDLE GP  P++   +IEI KGS+ KYELDKK+GLI +DRVLYS   YP +YG IP+T  +D+DP D+++IM+EP  PG  + A+ IGL  MID G+KD K++AV  +DP +  + DI ++P   L EI  FF+ YK+ + KE+ V  +  A  A   + +++ LY +
Sbjct:    2 NPFHDLEPGPEVPEVVYALIEIPKGSRNKYELDKKTGLIKLDRVLYSPFHYPVDYGIIPQTWYDDDDPFDIMVIMREPTYPGVLIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFNDWKDISDVPKAFLDEIAHFFQRYKELQGKEIIVEGWENAEKAKQEILRAIELYKE 172          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_PYRAB (Inorganic pyrophosphatase OS=Pyrococcus abyssi GN=ppa PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 7.422e-40
Identity = 78/171 (45.61%), Postives = 115/171 (67.25%), Query Frame = 2
Query:  278 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 790
            +P+HDLE GP  P++   +IEI KGS+ KYELDKK+GL+ +DRVLYS   YP +YG IPRT  +D+DP D+++IM+EP  P   + A+ IGL  MID G+KD K++AV  +DP ++ + DI ++P   L EI  FF+ YK+ + KE+ V  +  A  A   + +++ LY +
Sbjct:    2 NPFHDLEPGPNVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPRTWYDDDDPFDIMVIMREPTYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAIELYKE 172          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_PYRHO (Inorganic pyrophosphatase OS=Pyrococcus horikoshii GN=ppa PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.820e-39
Identity = 77/171 (45.03%), Postives = 114/171 (66.67%), Query Frame = 2
Query:  278 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 790
            +P+HDLE GP  P++   +IEI KGS+ KYELDK++GL+ +DRVLY+   YP +YG IPRT  ED DP D+++IM+EP  P   + A+ IGL  MID G+KD K++AV  +DP ++ + DI ++P   L EI  FF+ YK+ E KE+ V  +  A  A   + +++ +Y +
Sbjct:    2 NPFHDLEPGPNVPEVVYALIEIPKGSRNKYELDKETGLLKLDRVLYTPFHYPVDYGIIPRTWYEDGDPFDIMVIMREPTYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDISDVPKAFLDEIAHFFKRYKELEGKEIIVEGWEGAEAAKREILRAIEMYKE 172          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_PYRKO (Inorganic pyrophosphatase OS=Pyrococcus kodakaraensis GN=ppa PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 6.946e-38
Identity = 75/171 (43.86%), Postives = 114/171 (66.67%), Query Frame = 2
Query:  278 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 790
            +P+H+LE GP  P++   +IEI KGS+ KYELDKK+GL+ +DRVLYS   YP +YG IP+T  +D DP D+++IM+EPV P   + A+ IG+M M D G+KD K++AV  +DP ++ + DI ++P   L EI  FF+ YK+ + K   V  +  A +A   + +++ LY +
Sbjct:    2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDPFDIMVIMREPVYPLTIVEARPIGIMKMEDSGDKDWKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFQRYKELQGKTTTVEGWGNAEEAKKEILRAIELYKE 172          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_PICTO (Inorganic pyrophosphatase OS=Picrophilus torridus GN=ppa PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.310e-36
Identity = 73/167 (43.71%), Postives = 101/167 (60.48%), Query Frame = 2
Query:  284 WHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLY 784
            WH +  GP  P     V+EI KG + KYE+ K+   I +DR++YSS VYP  YG IP+T   D DP+D ++ M +   PG  LRAK +G+M M+D G+ D+KII VC DDP Y   N+ +E+P H L E   FFE YKK +NKEV V  +     A   +++++  Y
Sbjct:    8 WHQVPPGPNPPDEVYVVVEIPKGERNKYEIAKEFPGIKLDRIIYSSYVYPLEYGLIPQTYYSDGDPIDAMVFMSQSTYPGVILRAKPVGMMNMVDSGDVDNKIICVCLDDPVYSKINNYREIPEHVLKETENFFETYKKLQNKEVKVTGWEGPDKAKQEIKKAIEDY 174          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_THEEB (Inorganic pyrophosphatase OS=Thermosynechococcus elongatus (strain BP-1) GN=ppa PE=3 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 2.235e-36
Identity = 71/143 (49.65%), Postives = 96/143 (67.13%), Query Frame = 2
Query:  290 DLEIGPGAPK--IFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENK 712
            DL   P  PK  + N ++EI  GS+ KYE DK+  +  +DRVLYS+VVYP++YGFIP TL +D DPLD L++M EP  PGC + A+ IG++ MID G++D+KI+ V  DDP Y     +K++ PHRL EI  FF  YK  + K
Sbjct:    4 DLSRIPAQPKPGVVNVLVEIAGGSRNKYEFDKEMKVFALDRVLYSAVVYPYDYGFIPNTLADDGDPLDGLVMMDEPTFPGCVIPARPIGMLEMIDSGDRDEKILCVPVDDPRYAEVKSLKDIAPHRLEEIAEFFRTYKNLQKK 146          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_HALSA (Inorganic pyrophosphatase OS=Halobacterium salinarium GN=ppa PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.918e-36
Identity = 75/171 (43.86%), Postives = 110/171 (64.33%), Query Frame = 2
Query:  275 AHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            A+ W DLE GP AP +   V+E  KG + KYE DK    +++DRVL+S+V YP +YGFIP++  +D DP DVL+++++   PGC + A+ + LM M D GE+DDK+IAV  +DP Y    D+ +L   + AEI  FFE YK  E +KE AV  +  A  A ++++ + +LY
Sbjct:    2 ANLWEDLETGPDAPDVIYAVVECLKGERNKYEYDKDIPGVVLDRVLHSNVHYPSDYGFIPQSYYDDGDPFDVLVLVEDQTFPGCVIEARPVALMEMDDDGEQDDKVIAVPEEDPRYDDVEDVDDLTDQQKAEIAEFFETYKNLEADKETAVLGWGDAQAAKDAIEHAQDLY 172          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_THEAC (Inorganic pyrophosphatase OS=Thermoplasma acidophilum GN=ppa PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 8.491e-36
Identity = 72/169 (42.60%), Postives = 107/169 (63.31%), Query Frame = 2
Query:  284 WHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 790
            +H + +GP  P+    ++EI +GS+VKYE+ K    ++VDRVLYSSVVYP +YG IPRTL  D DP+DV++++ +P  PG  ++ + IG+M M+DQGE D+KI+AV   DP   +  D+K++  H L EI  FF  YK  E KE  V  +     A   ++ S+ +Y +
Sbjct:    5 YHSVPVGPKPPEEVYVIVEIPRGSRVKYEIAKDFPGMLVDRVLYSSVVYPVDYGLIPRTLYYDGDPMDVMVLISQPTFPGAIMKVRPIGMMKMVDQGETDNKILAVFDKDPNVSYIKDLKDVNAHLLDEIANFFSTYKILEKKETKVLGWEGKEAALKEIEVSIKMYEE 173          
The following BLAST results are available for this feature:
BLAST of DY258875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
IPYR_METKA5.140e-4146.15Inorganic pyrophosphatase OS=Methanopyrus kandleri... [more]
IPYR_PYRFU1.495e-4046.20Inorganic pyrophosphatase OS=Pyrococcus furiosus G... [more]
IPYR_THELI1.953e-4046.20Inorganic pyrophosphatase OS=Thermococcus litorali... [more]
IPYR_PYRAB7.422e-4045.61Inorganic pyrophosphatase OS=Pyrococcus abyssi GN=... [more]
IPYR_PYRHO2.820e-3945.03Inorganic pyrophosphatase OS=Pyrococcus horikoshii... [more]
IPYR_PYRKO6.946e-3843.86Inorganic pyrophosphatase OS=Pyrococcus kodakaraen... [more]
IPYR_PICTO1.310e-3643.71Inorganic pyrophosphatase OS=Picrophilus torridus ... [more]
IPYR_THEEB2.235e-3649.65Inorganic pyrophosphatase OS=Thermosynechococcus e... [more]
IPYR_HALSA2.918e-3643.86Inorganic pyrophosphatase OS=Halobacterium salinar... [more]
IPYR_THEAC8.491e-3642.60Inorganic pyrophosphatase OS=Thermoplasma acidophi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258875 ID=DY258875; Name=DY258875; organism=Citrus clementina; type=EST; length=1058bp
GTTCTCTTGCTTTCTCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTA
ATATCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTG
TGGTCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTG
AACCGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTC
CTGTCTCCCAACCTCCAGCACATCCTCCGCTTAACGAAAGGATACTTTCT
TCAATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGAT
TGGACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAG
GGAGCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTT
GATCGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCAT
ACCTCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCA
TGCAGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATTGGA
CTCATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGT
CTGTGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTC
CACCACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGAAA
AATGAGAACAAGGAAGTTGCTGTAAATGACTTTCTGCCAGCCTCTGATGC
CTATAATTCAGTCCAGCAGTCTATGAACCTCTATGCTGACTATATTGTGG
AGAGCTTGAGGCGGTAGTCGTTTGATCACCTGAGTGATAGATTCCGTCGT
GGGATGTTTCATACAGATATTGGTGTGGTTACCTATACAAGTTCCTTTTA
TCATTACAAGAAACTCTATTTTCTCCTTGCATGGACGCCCCAAGGTTTCT
TCCAATGGCTGGCCTAATTTGTGGCATTTTTCTGGGTTAATTGACCTACT
ACTGGCTACCCCCCGGGGAAACTGGGAGGAAGGGGTTTTGGAAGGGCCAA
AAAATTTT
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