DY258875

Overview
NameDY258875
Unique NameDY258875
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1058
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_ANASP (Inorganic pyrophosphatase OS=Anabaena sp. (strain PCC 7120) GN=ppa PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.109e-35
Identity = 75/167 (44.91%), Postives = 99/167 (59.28%), Query Frame = 2
Query:  290 DLEIGPGAPK--IFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLY 784
            DL   P  PK  + N +IEI  GS+ KYE DK      +DRVLYSSV YP++YGF+P TL +D DPLD ++I+ EP  PGC + A+ IG + MID G++D+KI+AV   DP Y H   + ++ PHRL EI  FF  YK  E K   +  +         V QS+  Y
Sbjct:    2 DLSRIPAQPKPGVINILIEIAGGSQNKYEFDKDLEAFALDRVLYSSVKYPYDYGFVPNTLADDGDPLDGMVIIDEPTFPGCVIAARPIGFLEMIDGGDRDEKILAVPDKDPRYAHVKSLNDVAPHRLDEIAEFFRSYKNLEKKVTQILGWQDVDQVKALVDQSIKAY 168          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_SYNY3 (Inorganic pyrophosphatase OS=Synechocystis sp. (strain PCC 6803) GN=ppa PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 7.188e-35
Identity = 73/143 (51.05%), Postives = 92/143 (64.34%), Query Frame = 2
Query:  290 DLEIGPGAPK--IFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENK 712
            DL   P  PK  + N +IEI  GSK KYE DK      +DRVLYSSV YP++YGFIP TL +D DPLD ++IM +P  PGC + A+ IG++ MID G++D+KI+ V A DP Y +   I +L  HRL EI  FF  YK  E K
Sbjct:    2 DLSRIPAQPKAGLINVLIEIPAGSKNKYEFDKDMNCFALDRVLYSSVQYPYDYGFIPNTLADDGDPLDGMVIMDQPTFPGCVITARPIGMLEMIDGGDRDEKILCVPAKDPRYTYVKSINDLAGHRLDEIAEFFRSYKNLEKK 144          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_BACHD (Inorganic pyrophosphatase OS=Bacillus halodurans GN=ppa PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.038e-33
Identity = 69/157 (43.95%), Postives = 95/157 (60.51%), Query Frame = 2
Query:  314 PKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLY 784
            PK+    IEI  GS+ KYE DK+ G+  +DRVL+S + YP  YG+I  TL  D DPLDVL+I+  P  PGC + AK +G + MID GE+D K+IAV  +DP ++  N + +LP H+L EI  FF+ YK  E K+  V  +  A  A   + +    Y
Sbjct:    5 PKVIEAFIEIPTGSQNKYEYDKERGVFKLDRVLFSPMFYPAEYGYIENTLALDGDPLDVLVIVSNPTFPGCVIDAKVLGFLNMIDGGEEDQKLIAVPTEDPRFKDVNSLNDLPKHKLDEIAHFFKTYKDLEGKKTEVGAYEDAEAAAKLIDECFARY 161          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_AERPE (Inorganic pyrophosphatase OS=Aeropyrum pernix GN=ppa PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 3.944e-33
Identity = 76/169 (44.97%), Postives = 109/169 (64.50%), Query Frame = 2
Query:  293 LEIGPG--APKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            L+IGPG  AP + N VIEI   S VKYE DK++ ++ VDR LY+S+VYP NYGFIP TL ED DP+DVL+I +EPV PG  + A  + ++ M D+   D K++AV     DP +  Y D+ ++P    ++I+ FFE YK+ E  K V V  + PA+DA   +++++  Y
Sbjct:    5 LKIGPGDEAPDVVNVVIEIPMNSSVKYEFDKEACIVKVDRFLYTSMVYPFNYGFIPGTLEEDGDPVDVLVISREPVAPGSLIEAVPVAVLDMEDEEGPDSKVVAVPKAKLDPLFASYKDVGDIPDALKSKIKHFFEHYKELEPGKWVRVTGWRPAADAKEIIRRAIERY 173          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_MYCPE (Inorganic pyrophosphatase OS=Mycoplasma penetrans GN=ppa PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 5.152e-33
Identity = 74/156 (47.44%), Postives = 94/156 (60.26%), Query Frame = 2
Query:  326 NCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLP---ASDAYNSVQQSMNLY 784
            N  IEI K S VKYE D+K+  I VDR+L+ + VYPHNYGFI   L  D D LD L+I  +  LPG  + AK IG M MID GE D K+I+V   DP Y+H N++ +L  H L EI+ FFE YK  +NK+V +  F     A+  YN   + M  Y
Sbjct:    4 NVTIEIPKKSNVKYEYDRKTNQISVDRILFGTEVYPHNYGFIKEALDWDGDELDALVIADQSFLPGIIVPAKIIGAMEMIDDGETDTKLISVIDCDPRYKHINNLSDLGEHTLKEIQNFFETYKLLQNKKVVIKGFKDSAWATKEYNECVELMKKY 159          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_UREPA (Inorganic pyrophosphatase OS=Ureaplasma parvum GN=ppa PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.339e-32
Identity = 69/156 (44.23%), Postives = 97/156 (62.18%), Query Frame = 2
Query:  326 NCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYADY 793
            N  IEI K S +KYE D+ +  IMVDR+L+ S+VYPHNYGF+   L  D D LDVL+   +   PG  + A+ +G M MID GE D K++AV   DP Y+H N+ K++P H LAE++ FFE+YK  +NK+V +  F     A    ++ + L  +Y
Sbjct:    4 NVTIEIPKNSNIKYEYDRATKEIMVDRILHGSMVYPHNYGFLKEALDYDGDELDVLVFADQAFQPGIKVPARVLGAMKMIDGGETDTKLLAVIDVDPRYKHINNFKDIPLHWLAEVQDFFENYKNLQNKKVKILGFEDEIWAQKEYEECVLLMKEY 159          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_AQUAE (Inorganic pyrophosphatase OS=Aquifex aeolicus GN=ppa PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.297e-31
Identity = 71/170 (41.76%), Postives = 105/170 (61.76%), Query Frame = 2
Query:  284 WHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            +  L  G   P+    VIEI +GS VKYELDK +G+I VDR L++++ YP NYGF+P+TL +D DP+DVL+I +EPV+PG  +R + IG++ M D+   D K+IAV  +  DP Y +   +  LP     +I+ FFE YK+ E  K V V ++    DA   +++ +  Y
Sbjct:    3 YDQLPPGKNPPEDIYVVIEIPQGSAVKYELDKDTGVIFVDRFLFTAMYYPFNYGFVPQTLADDGDPVDVLVISREPVVPGAVMRCRPIGMLEMRDEAGIDTKVIAVPHEKLDPSYSNIKTVDNLPEIVREKIKHFFEHYKELEPGKWVKVENWKGLQDAIEEIKKGIENY 172          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_AQUPY (Inorganic pyrophosphatase OS=Aquifex pyrophilus GN=ppa PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.403e-30
Identity = 72/170 (42.35%), Postives = 104/170 (61.18%), Query Frame = 2
Query:  284 WHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            + DL  G   P+    VIEI +GS +KYELDK +G+I VDR L++++ YP NYGFIP+TL +D DP+DVL+I +EPV PG  +R + IG++ M D+   D K+IAV  +  DP Y     + +LP      I+ FFE YK+ E  K V V ++    DA   +++ +  Y
Sbjct:    3 YKDLPPGKNPPEDIYVVIEIPQGSGIKYELDKDTGVIFVDRFLFTAMYYPFNYGFIPQTLADDGDPVDVLVISREPVAPGSVMRCRPIGMLEMRDEEGIDTKLIAVPHEKLDPTYSDIKTVDQLPEIIRERIKHFFEHYKELEPGKWVKVENWRGLQDAIEEIKKGIENY 172          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_SULSO (Inorganic pyrophosphatase OS=Sulfolobus solfataricus GN=ppa PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.393e-30
Identity = 72/166 (43.37%), Postives = 109/166 (65.66%), Query Frame = 2
Query:  293 LEIGPG--APKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 775
            +++GPG  AP   N  IEI  GS +KYE D++  +I VDRVLY+S+VYP NYGFIP TL ED DPLDVL++    ++PG  + A+ IG++ M D+  +D K+IAV  +  DP + + ND+K+LP     +I  FFE YK+ E NK V ++ +   ++A   +++++
Sbjct:    1 MKLGPGKKAPDEINVFIEIPMGSNIKYEYDEEEDIIKVDRVLYTSMVYPFNYGFIPETLEEDGDPLDVLVLGNYSLMPGTVIEARPIGMIYMRDEEGEDAKVIAVPRNKTDPSFSNINDVKDLPEAIRNKIVHFFEHYKELEPNKWVKISGWGSVAEAKERIKKAI 166          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_SULAC (Inorganic pyrophosphatase OS=Sulfolobus acidocaldarius GN=ppa PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.125e-30
Identity = 72/161 (44.72%), Postives = 101/161 (62.73%), Query Frame = 2
Query:  293 LEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQ 766
            L  G  AP + N ++EI +GS +KYE D + G+I VDRVLY+S+ YP NYGFIP TL ED DPLDVL+I    + PG  +  + IG++ M D+  +D KI+AV  D  DP + +  DI +LP     +I  FFE YK+ E  K V ++ +  A++A N +Q
Sbjct:    3 LSPGKNAPDVVNVLVEIPQGSNIKYEYDDEEGVIKVDRVLYTSMNYPFNYGFIPGTLEEDGDPLDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDINDLPQATKNKIVHFFEHYKELEPGKYVKISGWGSATEAKNRIQ 163          
The following BLAST results are available for this feature:
BLAST of DY258875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
IPYR_ANASP1.109e-3544.91Inorganic pyrophosphatase OS=Anabaena sp. (strain ... [more]
IPYR_SYNY37.188e-3551.05Inorganic pyrophosphatase OS=Synechocystis sp. (st... [more]
IPYR_BACHD1.038e-3343.95Inorganic pyrophosphatase OS=Bacillus halodurans G... [more]
IPYR_AERPE3.944e-3344.97Inorganic pyrophosphatase OS=Aeropyrum pernix GN=p... [more]
IPYR_MYCPE5.152e-3347.44Inorganic pyrophosphatase OS=Mycoplasma penetrans ... [more]
IPYR_UREPA3.339e-3244.23Inorganic pyrophosphatase OS=Ureaplasma parvum GN=... [more]
IPYR_AQUAE6.297e-3141.76Inorganic pyrophosphatase OS=Aquifex aeolicus GN=p... [more]
IPYR_AQUPY1.403e-3042.35Inorganic pyrophosphatase OS=Aquifex pyrophilus GN... [more]
IPYR_SULSO2.393e-3043.37Inorganic pyrophosphatase OS=Sulfolobus solfataric... [more]
IPYR_SULAC3.125e-3044.72Inorganic pyrophosphatase OS=Sulfolobus acidocalda... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258875 ID=DY258875; Name=DY258875; organism=Citrus clementina; type=EST; length=1058bp
GTTCTCTTGCTTTCTCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTA
ATATCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTG
TGGTCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTG
AACCGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTC
CTGTCTCCCAACCTCCAGCACATCCTCCGCTTAACGAAAGGATACTTTCT
TCAATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGAT
TGGACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAG
GGAGCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTT
GATCGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCAT
ACCTCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCA
TGCAGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATTGGA
CTCATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGT
CTGTGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTC
CACCACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGAAA
AATGAGAACAAGGAAGTTGCTGTAAATGACTTTCTGCCAGCCTCTGATGC
CTATAATTCAGTCCAGCAGTCTATGAACCTCTATGCTGACTATATTGTGG
AGAGCTTGAGGCGGTAGTCGTTTGATCACCTGAGTGATAGATTCCGTCGT
GGGATGTTTCATACAGATATTGGTGTGGTTACCTATACAAGTTCCTTTTA
TCATTACAAGAAACTCTATTTTCTCCTTGCATGGACGCCCCAAGGTTTCT
TCCAATGGCTGGCCTAATTTGTGGCATTTTTCTGGGTTAATTGACCTACT
ACTGGCTACCCCCCGGGGAAACTGGGAGGAAGGGGTTTTGGAAGGGCCAA
AAAATTTT
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