DY258875

Overview
NameDY258875
Unique NameDY258875
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1058
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_BRUME (Inorganic pyrophosphatase OS=Brucella melitensis GN=ppa PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.990e-28
Identity = 64/151 (42.38%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  293 LEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDF 733
            + IG   P+  N +IE+  G + +KYE+DKK+G ++VDR LY+ + YP NYGF+P TL ED DP+DVL+    P++PGC +  + IG++ M D   KD+KIIAV +      Y   +D  ++P   L +I  FFE YK  E  K V + D+
Sbjct:    6 ISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFEHYKDLEPGKWVKIGDW 156          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_NANEQ (Inorganic pyrophosphatase OS=Nanoarchaeum equitans GN=ppa PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.511e-28
Identity = 70/153 (45.75%), Postives = 95/153 (62.09%), Query Frame = 2
Query:  335 IEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            IE+ KGS VKYE +   G + VDR+LY ++ YP+NYGFIP TL ED DPLDVL+I +EP++PG +++ K IG++   D+   D KIIAV     DP Y    DI EL      +I+ FFE YK+ E  K V V +FL   +A   ++Q+   Y
Sbjct:    7 IEVPKGSNVKYEYE--DGKLKVDRILYGAMFYPYNYGFIPETLEEDGDPLDVLVITEEPLVPGSYIKVKPIGVLVTEDEKGVDRKIIAVPVKKVDPIYGEIEDISELKEGIKLKIKHFFERYKELEPGKFVKVKEFLGKEEAEKIIKQAQENY 157          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_MYCGE (Inorganic pyrophosphatase OS=Mycoplasma genitalium GN=ppa PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.511e-28
Identity = 62/158 (39.24%), Postives = 87/158 (55.06%), Query Frame = 2
Query:  320 IFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYADY 793
            + + ++EI K SK+KYE D+++G I VDR+L+ S  YP NYGFI  TL  D D LD  I   +P LP   +  + +G + MID GE D K++ V   DP Y+  N I +LP HR+ EI  F + YK  + K V +        A    +  + L  DY
Sbjct:    5 LIDVIVEIPKNSKIKYEYDRQTGQIRVDRILFGSESYPQNYGFIKNTLDWDGDELDCFIFADQPFLPATVVPTRIVGALEMIDDGEIDTKLLGVIDCDPRYKEINQISDLPKHRIEEILIFLKTYKLLQKKTVIIKGLKDVCWAKKEYEICLQLMKDY 162          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_HELPY (Inorganic pyrophosphatase OS=Helicobacter pylori GN=ppa PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.112e-27
Identity = 66/154 (42.86%), Postives = 94/154 (61.04%), Query Frame = 2
Query:  332 VIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            VIEI K S +KYELDK+SG +MVDRVLY +  YP NYGF+P TL  D DP+D L++       G  ++A+ +G++ M D+   D+K+IA+  D  DP + +  DI +L  H L +I+ FFE YK  E NK V V  F     A   +++++  Y
Sbjct:   18 VIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKESAIKVLEKAIKAY 171          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_HELPJ (Inorganic pyrophosphatase OS=Helicobacter pylori J99 GN=ppa PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.896e-27
Identity = 65/154 (42.21%), Postives = 94/154 (61.04%), Query Frame = 2
Query:  332 VIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            VIEI K S +KYELDK+SG +MVDRVLY +  YP NYGF+P TL  D DP+D L++       G  ++A+ +G++ M D+   D+K++A+  D  DP + +  DI +L  H L +I+ FFE YK  E NK V V  F     A   +++++  Y
Sbjct:   18 VIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLLALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKESAIKVLEKAIKAY 171          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_XANAC (Inorganic pyrophosphatase OS=Xanthomonas axonopodis pv. citri GN=ppa PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.234e-27
Identity = 67/165 (40.61%), Postives = 100/165 (60.61%), Query Frame = 2
Query:  302 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD--PEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            G   P+  N VIEI K S+ VKYE+DK SG I VDR+L + + YP NYG++P TLC D DP DVL+++  P++PG  +R + +G++ M D+   D+KI+AV  +     Y H  DI ++  H +  I  FFE YK  E  K V ++ +  A++A   + +S+  Y
Sbjct:    9 GKNLPEEINVVIEIPKDSEPVKYEVDKASGAIFVDRILSTPMRYPCNYGYVPNTLCGDGDPADVLVVLPLPLVPGSVVRCRPVGVLRMSDEAGSDEKILAVPIEKIFSGYAHIEDINQVSSHWMERIGHFFEHYKDLEKGKWVKLDGWGGAAEAKRILTESVERY 173          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_PSEAO (Inorganic pyrophosphatase OS=Pseudanabaena sp. (strain PCC 6903) GN=ppa PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.234e-27
Identity = 67/140 (47.86%), Postives = 85/140 (60.71%), Query Frame = 2
Query:  290 DLEIGPGAPK--IFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRT--LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 697
            DL   P  PK  I N +IEI  GSK KYE DK      +DRVLYSSV YP++YGF+P T  L +D DPLD ++IM  P  PG    A+ IG++ M+D G++D+K + V A DP Y +     +L  HRL EI  FF  YK
Sbjct:    2 DLSRIPPQPKAGILNVLIEIPAGSKNKYEFDKDLNAFALDRVLYSSVQYPYDYGFVPITNNLADDGDPLDGMVIMVPPTFPG-VATARPIGMLQMVDGGDRDEKFLCVPAKDPRYTYVKSANDLAGHRLDEIFEFFRSYK 140          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_XANCP (Inorganic pyrophosphatase OS=Xanthomonas campestris pv. campestris GN=ppa PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.517e-27
Identity = 67/165 (40.61%), Postives = 100/165 (60.61%), Query Frame = 2
Query:  302 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD--PEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            G   P+  N VIEI K S+ VKYE+DK SG I VDR+L + + YP NYG++P TLC D DP DVL+++  P++PG  +R + +G++ M D+   D+KI+AV  +     Y H  DI ++  H +  I  FFE YK  E  K V ++ +  A++A   + +S+  Y
Sbjct:    9 GKNLPEEINVVIEIPKDSEPVKYEVDKASGAIFVDRILSTPMRYPCNYGYVPNTLCGDGDPADVLVVLPLPLVPGSVVRCRPVGVLRMSDEAGSDEKILAVPIEKIFSGYAHIEDIDQVSSHWMERIGHFFEHYKDLEKGKWVKLDGWGGAAEAKRILVESVERY 173          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_MYCPN (Inorganic pyrophosphatase OS=Mycoplasma pneumoniae GN=ppa PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.517e-27
Identity = 61/158 (38.61%), Postives = 86/158 (54.43%), Query Frame = 2
Query:  320 IFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYADY 793
            + +  +EI K SK+KYE D+K+  I VDR+L+ S  YP NYGFI  TL  D D LD  I   +  LPG  +  + +G + M+D GE D K++ V   DP Y+  N + +LP HR+ EI  F + YK  + KEV +        A    Q  ++L   Y
Sbjct:    5 LIDVTVEIPKSSKIKYEYDRKTSQIRVDRILFGSESYPQNYGFIANTLDWDGDELDCFIFADQAFLPGVVVPTRIVGALEMVDDGELDTKLLGVIDCDPRYKEINSVNDLPKHRVDEIIGFLKTYKLLQKKEVIIKGVQSLEWAKKEYQVCVDLMKQY 162          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_MYCLE (Inorganic pyrophosphatase OS=Mycobacterium leprae GN=ppa PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.517e-27
Identity = 61/155 (39.35%), Postives = 94/155 (60.65%), Query Frame = 2
Query:  323 FNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            F+  IEI KG + KYE+D K+G + +DR LY+ + YP +YGFI  TL ED DPLD L+++ EP+ PG  + A+ +G+  M+D+   DDK++ V  +D  + H + I ++P   L  I+ FF  YK  E  K V   D++   +A   VQ+S+  +
Sbjct:    3 FDVTIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDPLDALVLLPEPLFPGVLVEARPVGMFRMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFELDAIKHFFVHYKDLEPGKFVKAADWVGRDEAEAEVQRSVERF 157          
The following BLAST results are available for this feature:
BLAST of DY258875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
IPYR_BRUME4.990e-2842.38Inorganic pyrophosphatase OS=Brucella melitensis G... [more]
IPYR_NANEQ8.511e-2845.75Inorganic pyrophosphatase OS=Nanoarchaeum equitans... [more]
IPYR_MYCGE8.511e-2839.24Inorganic pyrophosphatase OS=Mycoplasma genitalium... [more]
IPYR_HELPY1.112e-2742.86Inorganic pyrophosphatase OS=Helicobacter pylori G... [more]
IPYR_HELPJ1.896e-2742.21Inorganic pyrophosphatase OS=Helicobacter pylori J... [more]
IPYR_XANAC3.234e-2740.61Inorganic pyrophosphatase OS=Xanthomonas axonopodi... [more]
IPYR_PSEAO3.234e-2747.86Inorganic pyrophosphatase OS=Pseudanabaena sp. (st... [more]
IPYR_XANCP5.517e-2740.61Inorganic pyrophosphatase OS=Xanthomonas campestri... [more]
IPYR_MYCPN5.517e-2738.61Inorganic pyrophosphatase OS=Mycoplasma pneumoniae... [more]
IPYR_MYCLE5.517e-2739.35Inorganic pyrophosphatase OS=Mycobacterium leprae ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258875 ID=DY258875; Name=DY258875; organism=Citrus clementina; type=EST; length=1058bp
GTTCTCTTGCTTTCTCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTA
ATATCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTG
TGGTCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTG
AACCGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTC
CTGTCTCCCAACCTCCAGCACATCCTCCGCTTAACGAAAGGATACTTTCT
TCAATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGAT
TGGACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAG
GGAGCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTT
GATCGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCAT
ACCTCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCA
TGCAGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATTGGA
CTCATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGT
CTGTGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTC
CACCACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGAAA
AATGAGAACAAGGAAGTTGCTGTAAATGACTTTCTGCCAGCCTCTGATGC
CTATAATTCAGTCCAGCAGTCTATGAACCTCTATGCTGACTATATTGTGG
AGAGCTTGAGGCGGTAGTCGTTTGATCACCTGAGTGATAGATTCCGTCGT
GGGATGTTTCATACAGATATTGGTGTGGTTACCTATACAAGTTCCTTTTA
TCATTACAAGAAACTCTATTTTCTCCTTGCATGGACGCCCCAAGGTTTCT
TCCAATGGCTGGCCTAATTTGTGGCATTTTTCTGGGTTAATTGACCTACT
ACTGGCTACCCCCCGGGGAAACTGGGAGGAAGGGGTTTTGGAAGGGCCAA
AAAATTTT
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