DY258875

Overview
NameDY258875
Unique NameDY258875
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1058
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_CAMJE (Inorganic pyrophosphatase OS=Campylobacter jejuni GN=ppa PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.517e-27
Identity = 66/160 (41.25%), Postives = 95/160 (59.38%), Query Frame = 2
Query:  314 PKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            P   N VIEI  GS +KYE+DK SG IMVDRV+ S++ YP NYGFI  TL +D DP+D+L++ + P+  G  +  + IG++ M D+   D+K++AV     D  Y +     +LP   L +I+ FFE YK  E NK V V DF     A   +++++  Y
Sbjct:   12 PNKINAVIEIPYGSNIKYEIDKDSGAIMVDRVMASAIFYPANYGFIANTLADDGDPVDILVLNEYPIQAGAVIPCRLIGVLIMEDESGMDEKLLAVPNSKIDARYDNIKTYTDLPQATLNKIKNFFETYKILEPNKWVKVQDFKDEKAAIEILEKAIKNY 171          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_RHIME (Inorganic pyrophosphatase OS=Rhizobium meliloti GN=ppa PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 7.205e-27
Identity = 65/165 (39.39%), Postives = 99/165 (60.00%), Query Frame = 2
Query:  293 LEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 775
            + IG   P+  N ++E+  G   +KYE+DK++G ++VDR LY+ + YP NYGF+P TL +D DP+DVLI    P++PGC +  + IG+M M D   +D+KIIAV +      Y   +D  +LP   L +I  FFE YK  E  K V +  +  AS A   +++++
Sbjct:    6 ISIGKNPPEDVNVIVEVPVGGHPIKYEMDKEAGTLVVDRFLYTPMTYPGNYGFVPHTLSDDGDPIDVLICNTRPLVPGCVINVRPIGVMMMEDNSGQDEKIIAVPSAHLTKRYDKVHDYTDLPEITLKQIEHFFEHYKDLEPGKWVKIFGWKDASMAKQLIREAV 170          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_BARBK (Inorganic pyrophosphatase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=ppa PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 7.205e-27
Identity = 68/166 (40.96%), Postives = 100/166 (60.24%), Query Frame = 2
Query:  290 DLEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 775
            ++ IG   P+  N +IE+   S+ VKYE+DKKSG + VDR + +S+VYP NYGFIP TL ED+DP+DVL+    P++PGC +  + IG + M D G KD+KIIAV       +Y   +D  +L  + L +I  FF+ YK  E  K   +  +   + A   +QQ++
Sbjct:    5 EIPIGNNPPEDVNVIIEVPVDSQPVKYEMDKKSGSLFVDRFISTSMVYPGNYGFIPHTLSEDSDPIDVLVCNTRPLIPGCVINVRPIGALIMEDDGGKDEKIIAVPTPKLTQQYIGIHDYTDLTENILKKIEHFFKHYKDLEAGKWAKIEGWRDKNFARELIQQAI 170          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_AGRT5 (Inorganic pyrophosphatase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ppa PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 7.205e-27
Identity = 61/141 (43.26%), Postives = 86/141 (60.99%), Query Frame = 2
Query:  293 LEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE 706
            + IG   P   N ++E+  G   +KYE+DK +G ++VDR LY+ + YP NYGF+P TL +D DP+DVLI    P++PGC +  + IG+M M D G KD+KI+AV A      Y   ++  +LP   L +I  FFE YK  E
Sbjct:    6 ISIGKNPPDDINVIVEVPVGGHPIKYEMDKDAGALIVDRFLYTPMTYPGNYGFVPHTLSDDGDPIDVLICNTRPLVPGCVINVRPIGVMIMEDDGGKDEKILAVPAPKLTQRYDKVHNYTDLPEITLKQIEHFFEHYKDLE 146          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_XYLFT (Inorganic pyrophosphatase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ppa PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 9.410e-27
Identity = 65/167 (38.92%), Postives = 99/167 (59.28%), Query Frame = 2
Query:  302 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD--PEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLYAD 790
            G   P+  N +IEI K S+ VKYE+DK SG I VDR+L + + YP NYG++P TLC D DP+DV++++  P++PG  +R + +G++ M D+   D+K++AV        Y H  DI ++  H L  I  FFE YK  E  K V ++ +  A+ A   +  ++  Y D
Sbjct:    9 GNNLPEEINVIIEIPKDSEPVKYEVDKASGAIFVDRILSTPMRYPCNYGYVPNTLCGDGDPVDVMVVLPLPLVPGSVVRCRPVGVLQMKDEAGNDEKLLAVPVSKIFSGYSHIEDINQVSAHWLERIGHFFEHYKDLEKGKWVEIDGWGNATTAKQILTNAVQRYKD 175          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_XYLFA (Inorganic pyrophosphatase OS=Xylella fastidiosa GN=ppa PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 9.410e-27
Identity = 65/167 (38.92%), Postives = 99/167 (59.28%), Query Frame = 2
Query:  302 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD--PEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLYAD 790
            G   P+  N +IEI K S+ VKYE+DK SG I VDR+L + + YP NYG++P TLC D DP+DV++++  P++PG  +R + +G++ M D+   D+K++AV        Y H  DI ++  H L  I  FFE YK  E  K V ++ +  A+ A   +  ++  Y D
Sbjct:    9 GNNLPEEINVIIEIPKDSEPVKYEVDKASGAIFVDRILSTPMRYPCNYGYVPNTLCGDGDPVDVMVVLPLPLVPGSVVRCRPVGVLQMKDEAGNDEKLLAVPVSKIFSGYSHIEDINQVSAHWLERIGHFFEHYKDLEKGKWVEIDGWGNATTAKQILTNAVQRYKD 175          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_GLUOX (Inorganic pyrophosphatase OS=Gluconobacter oxydans GN=ppa PE=3 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 1.229e-26
Identity = 67/165 (40.61%), Postives = 99/165 (60.00%), Query Frame = 2
Query:  296 EIGPGA--PKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 775
            +I PG   P   N VIEI +GS+VKYE+DK SG ++VDR L++ + YP  YGFIP TL  D DP D L++    V+PG  +RA+ IG++ M D+  +D+KII V  D   P++ + + + +LP      I  FFE YK  E NK V V  +   ++A   + +++
Sbjct:    5 KISPGKDLPNDINVVIEIPQGSQVKYEVDKDSGALVVDRFLFTPMAYPAAYGFIPGTLAADGDPADALVLTPAAVVPGSVIRARPIGMLKMEDESGQDEKIICVPHDKVHPQFSNVHSVDDLPEITKKAITHFFERYKDLEPNKWVKVTGWADKAEAGKVIMEAL 169          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_CAUCR (Inorganic pyrophosphatase OS=Caulobacter crescentus GN=ppa PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.229e-26
Identity = 61/168 (36.31%), Postives = 98/168 (58.33%), Query Frame = 2
Query:  293 LEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            + +G   P   N +IEI +G + VKYE+DK+SG +MVDR L++++ YP NYGFIP TL +D DP D++++   PV+PG  +R + IG + M+D+   D+KI+AV  D   P Y      ++LP     +I  FF+ YK  E  K   ++ +    +    ++ ++  Y
Sbjct:    6 IAVGVNPPYDLNAIIEIPQGGEPVKYEIDKESGALMVDRFLHTAMFYPANYGFIPHTLADDGDPADIMVVGPTPVVPGAIIRCRPIGTLMMVDEAGSDEKILAVPVDKLHPFYTGVTSWRDLPTILTEQIAHFFQHYKDLEKGKSTKISGWADPDETAEIIRTAIKRY 173          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR2_PSESM (Inorganic pyrophosphatase 2 OS=Pseudomonas syringae pv. tomato GN=ppa2 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.229e-26
Identity = 71/169 (42.01%), Postives = 99/169 (58.58%), Query Frame = 2
Query:  290 DLEIGPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            D+  G   P  F  VIEI    S +KYE+DK SG I VDR L + + YP NYGFIP TL +D DPLDVL+I   PV PG  +R++ +G+M M D+   D K+IAV  +     Y +  +  +LP   LA+I+ FFE+YK  E  K V +  +  A +A   +++S+  Y
Sbjct:    5 DIPAGNAIPDDFFTVIEIPANHSPIKYEVDKPSGQIFVDRFLSTPMFYPANYGFIPNTLSDDGDPLDVLVICPYPVSPGVVIRSRPVGVMYMTDEAGADAKVIAVPHEKLSSMYSNVKECSDLPALLLAQIQHFFENYKALEPGKWVKMGRWGSADEAREDIRKSVAAY 173          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_THET8 (Inorganic pyrophosphatase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ppa PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 2.096e-26
Identity = 62/141 (43.97%), Postives = 85/141 (60.28%), Query Frame = 2
Query:  293 LEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKE 715
            L +G  AP++ + VIE+ +GS  KYE D   G I +DRVL  +  YP +YGFIP TL ED DPLD L++   P+LPG  +  + +GL+ M D+   D K+I V A+D    H  DI ++P     EI+ FFE YK  E K+
Sbjct:    7 LPVGDKAPEVVHMVIEVPRGSGNKYEYDPDLGAIKLDRVLPGAQFYPGDYGFIPSTLAEDGDPLDGLVLSTYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDHIQDIGDVPEGVKQEIQHFFETYKALEAKK 147          
The following BLAST results are available for this feature:
BLAST of DY258875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
IPYR_CAMJE5.517e-2741.25Inorganic pyrophosphatase OS=Campylobacter jejuni ... [more]
IPYR_RHIME7.205e-2739.39Inorganic pyrophosphatase OS=Rhizobium meliloti GN... [more]
IPYR_BARBK7.205e-2740.96Inorganic pyrophosphatase OS=Bartonella bacillifor... [more]
IPYR_AGRT57.205e-2743.26Inorganic pyrophosphatase OS=Agrobacterium tumefac... [more]
IPYR_XYLFT9.410e-2738.92Inorganic pyrophosphatase OS=Xylella fastidiosa (s... [more]
IPYR_XYLFA9.410e-2738.92Inorganic pyrophosphatase OS=Xylella fastidiosa GN... [more]
IPYR_GLUOX1.229e-2640.61Inorganic pyrophosphatase OS=Gluconobacter oxydans... [more]
IPYR_CAUCR1.229e-2636.31Inorganic pyrophosphatase OS=Caulobacter crescentu... [more]
IPYR2_PSESM1.229e-2642.01Inorganic pyrophosphatase 2 OS=Pseudomonas syringa... [more]
IPYR_THET82.096e-2643.97Inorganic pyrophosphatase OS=Thermus thermophilus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258875 ID=DY258875; Name=DY258875; organism=Citrus clementina; type=EST; length=1058bp
GTTCTCTTGCTTTCTCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTA
ATATCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTG
TGGTCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTG
AACCGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTC
CTGTCTCCCAACCTCCAGCACATCCTCCGCTTAACGAAAGGATACTTTCT
TCAATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGAT
TGGACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAG
GGAGCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTT
GATCGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCAT
ACCTCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCA
TGCAGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATTGGA
CTCATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGT
CTGTGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTC
CACCACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGAAA
AATGAGAACAAGGAAGTTGCTGTAAATGACTTTCTGCCAGCCTCTGATGC
CTATAATTCAGTCCAGCAGTCTATGAACCTCTATGCTGACTATATTGTGG
AGAGCTTGAGGCGGTAGTCGTTTGATCACCTGAGTGATAGATTCCGTCGT
GGGATGTTTCATACAGATATTGGTGTGGTTACCTATACAAGTTCCTTTTA
TCATTACAAGAAACTCTATTTTCTCCTTGCATGGACGCCCCAAGGTTTCT
TCCAATGGCTGGCCTAATTTGTGGCATTTTTCTGGGTTAATTGACCTACT
ACTGGCTACCCCCCGGGGAAACTGGGAGGAAGGGGTTTTGGAAGGGCCAA
AAAATTTT
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