DY258881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DBP2_EMENI (ATP-dependent RNA helicase dbp2 OS=Emericella nidulans GN=dbp2 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.228e-32 Identity = 81/225 (36.00%), Postives = 127/225 (56.44%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGR 665 P+ L+LAPTRELA Q++ E + S + CVYGG P Q+R L GV+ + TPGR+ID+++ NL V ++VLDEAD+ML +GF + I+ ++ +RQ M+SAT P +R L + +L N + V+ +G D I S +EK + + + + +G KC+VFT TKR AD + + + + +HGD Q +R+ L+ F+ G+ Sbjct: 214 PIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNNYIQVN-IGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGK 437
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DEAD_HAEIN (Cold-shock DEAD box protein A homolog OS=Haemophilus influenzae GN=deaD PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32 Identity = 86/225 (38.22%), Postives = 129/225 (57.33%), Query Frame = 3 Query: 3 NPLCLVLAPTRELAKQVEKE---FHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDL-VGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDG 662 +P LV+APTRELA QV F + A + +YGG Q+RAL G VVGTPGR++D I+R LNLSE++F+VLDEAD+ML +GF +DVE ++ LP+N Q +FSATMP IR +T +++ +P V + V + + D Y + + +++ L E I+F +TK + + K+ + L+GD++Q RE+TL R+G Sbjct: 73 HPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWY--VHGVRKNEALLRFLEVEDFDA--AIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNG 293
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DEAD_BUCAI (Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=deaD PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32 Identity = 82/226 (36.28%), Postives = 129/226 (57.08%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAP---SLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFN 671 P LVLAPTRELA QV + F + + + + +YGG Q+RAL G VVGTPGR++D +KR LNLS + +VLDEAD+ML +GF EDVE I+ ++P+ Q +FSATMP IR ++ ++++NP + + + + +Y + + E I+F +TK ++ A+ ++ YN L+GD++Q+ RE+TL ++GR + Sbjct: 75 PQILVLAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGGQRYELQLRALRQGPQIVVGTPGRLLDHLKRGTLNLSNLHGLVLDEADEMLRMGFIEDVETIMAQIPKEHQTALFSATMPEAIRRISKRFMRNPKEIKI----QSNITTRPDIKQSYWMVYGRKTDALIRFLEAEDFSATIIFVRTKNATLEVSEALERNGYNSAALNGDMNQALREQTLERLKNGRLD 296
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DBP2_PICST (ATP-dependent RNA helicase DBP2 OS=Pichia stipitis GN=DBP2 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32 Identity = 82/225 (36.44%), Postives = 131/225 (58.22%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEK-PSIIGQLITEHA-KGGKCIVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFRDGR 665 P+ LVLAPTRELA Q+++E + S+ + CVYGG P Q+R L GV+ V+ TPGR+ID+++ NL V ++VLDEAD+ML +GF + I++++ +RQ +M+SAT P +++L YL++P+ V +G + + I S YEK ++ L T K K ++F TK+ D + ++ A + +HGD QS+R+ L F+ G+ Sbjct: 171 PVVLVLAPTRELAVQIQQECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEIVIATPGRLIDMLEMGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQNLARDYLQDPIQV-RIGSLELAASHTITQVVEVISEYEKRDRLVKHLETATTEKESKVLIFASTKKTCDEVTSYLRADGWPALAIHGDKQQSERDWVLREFKTGK 394
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DED1_LODEL (ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus GN=DED1 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.094e-32 Identity = 88/229 (38.43%), Postives = 136/229 (59.39%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP----QNRQGMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGR 665 P LV+APTREL Q+ E + A + VYGG I +Q+R LD G D +V TPGR+ DL++R ++L+ ++++VLDEAD+ML +GF + I++ Q+RQ +MFSAT P I+ L +LK+ L+V VG + + + + + EK S+I L+ +++ G IVFT+TKR AD LA + + + +HGD SQ +RE+ L+AF+ G+ Sbjct: 259 PTILVMAPTRELVSQIYDESKKFAYRSWVRPCVVYGGADIGNQIRQLDRGCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMGFEPQIRHIVQECDMPDVQDRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKV----LYVEDEEKKSVILDLLNANSE-GLTIVFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGQ 482
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DBP2_PICGU (ATP-dependent RNA helicase DBP2 OS=Pichia guilliermondii GN=DBP2 PE=3 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 2.735e-32 Identity = 81/225 (36.00%), Postives = 131/225 (58.22%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEK-PSIIGQLITEHA-KGGKCIVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFRDGR 665 P+ LVLAPTRELA Q+++E + S + C+YGG P Q+R L GV+ + TPGR+ID+++ NL V ++VLDEAD+ML +GF + I++++ +RQ +M+SAT P +++LT YL +P+ V +G + + I S +EK ++ L T A K K ++F+ TKR D + ++ A + +HGD Q++R+ L F+ G+ Sbjct: 199 PIVLVLAPTRELAVQIQQECSKFGASSRIRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQTLTRDYLNDPIQV-TIGSLELAASHTITQIVEVLSEFEKRDRLVKHLETATADKEAKVLIFSSTKRACDEITSYLRADGWPALAIHGDKQQNERDWVLREFKTGK 422
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DED1_CANGA (ATP-dependent RNA helicase DED1 OS=Candida glabrata GN=DED1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32 Identity = 87/231 (37.66%), Postives = 134/231 (58.01%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ----NRQGMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLA-HAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFN 671 P +V+APTRELA Q+ E + + VYGG PI +QMR +D+G D +V TPGR+ DL++R ++LS V+++VLDEAD+ML +GF + I+E RQ +MFSAT P I+ L +L + L+V VG + + + I + +K S + L+ + ++F +TKR AD+L + ++++ +HGD SQ++RER L+AFR GR N Sbjct: 229 PTAVVMAPTRELATQIFDEAKKFCYRSWVKPCVVYGGAPIGNQMREMDHGCDLLVATPGRLNDLLERGKVSLSNVKYLVLDEADRMLDMGFEPQIRHIVEDCDMPPTGERQTLMFSATFPHDIQHLARDFLHDYIFLSVGRVGSTSENITQRI----LYVENRDKNSALLDLLAA-SNDNLTLIFVETKRMADQLTDFLIMQNFSATAIHGDRSQAERERALAAFRSGRAN 454
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DBP3_LODEL (ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus GN=DBP3 PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32 Identity = 79/229 (34.50%), Postives = 129/229 (56.33%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESAPSLDTICV--YGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP-QNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADG--IPLYSIATSMYEKPSIIGQLITEHAKGG----KCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFN 671 L ++PTRELA Q+ + D CV YGG Q++ + G + VV TPGR++DLI A++LS + ++VLDEAD+ML GF ED+++I+ P Q RQ +MF+AT P +R L N ++ P+ V +GD D+ A+ + + ++K + L+ ++ G K +VF K++A R+ + ++ + +HGD+SQ QR + L +F+ G N Sbjct: 199 LCISPTRELALQIYDNLEDLTRGTDVSCVAIYGGVSKDDQIKKIRNGANVVVATPGRLVDLINDGAVDLSSINYLVLDEADRMLEKGFEEDIKLIIGSTPAQGRQTLMFTATWPKEVRELANNFMNQPVKV-TIGDRDELSANKRITQIVEVLDDKFQKEKKLINLLQKYQNTGNGDNKILVFALYKKEASRIESLLHRNKFKVAAIHGDLSQQQRTQALQSFKSGECN 426
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DBP2_CANGA (ATP-dependent RNA helicase DBP2 OS=Candida glabrata GN=DBP2 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32 Identity = 79/224 (35.27%), Postives = 126/224 (56.25%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-PLYSIATSMYEKPSIIGQLIT-EHAKGGKCIVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFRDG 662 P+ LVLAPTRELA Q++KE + S + CVYGG P Q+R L G + V+ TPGR+ID+++ NL V ++VLDEAD+ML +GF + I++++ +RQ +M+SAT P ++ L YL +P+ V +G + + I L + + ++ ++ L T K K ++F TKR D + ++ + +HGD Q +R+ L+ FR G Sbjct: 184 PIVLVLAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLNDPIQVQ-IGSLELAASHNITQLVEVVSEFEKRDRLVKHLDTASQDKESKILIFASTKRTCDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTG 406
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: CSHA_BACHK (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis subsp. konkukian GN=cshA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32 Identity = 80/219 (36.53%), Postives = 129/219 (58.90%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDG 662 +V+APTRELA QV +E ++ + + +YGG I+ Q+RAL +VGTPGR++D I R L L V+ VVLDEAD+ML++GF ED+E IL +P+ Q ++FSATMP IR + +++ P + + + + I + + +K ++ +L+ + IVF +TKR D L+ A+ + Y E +HGD++Q++R L F++G Sbjct: 74 IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEG 289 The following BLAST results are available for this feature:
BLAST of DY258881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258881 ID=DY258881; Name=DY258881; organism=Citrus clementina; type=EST; length=671bpback to top |