DY258881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DDX17_HUMAN (Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens GN=DDX17 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32 Identity = 82/225 (36.44%), Postives = 128/225 (56.89%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGR 665 P+CLVLAPTRELA+QV++ + + L + C+YGG P Q+R L+ GV+ + TPGR+ID ++ NL ++VLDEAD+ML +GF + I++++ +RQ +M+SAT P +R L +L++ ++ VG+ + I EK + QL+ E K K I+F +TKR D L M + + +HGD SQ +R+ L+ FR G+ Sbjct: 166 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGK 389
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DDX17_DROME (ATP-dependent RNA helicase p62 OS=Drosophila melanogaster GN=Rm62 PE=1 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32 Identity = 78/229 (34.06%), Postives = 127/229 (55.46%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEK---EFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVG---DSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFN 671 P+ LVLAPTRELA+Q+++ EF S+ +T CV+GG P QMR L G + V+ TPGR+ID + + NL ++VLDEAD+ML +GF + I+ ++ +RQ +M+SAT P ++ L +L N + +++ ++ + + + + + +++ + GK I+F +TKR D L + C +HGD SQS+R+ L FR G+ N Sbjct: 355 PIALVLAPTRELAQQIQQVATEFGSSSYVRNT-CVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSN 582
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DBP2_ASPOR (ATP-dependent RNA helicase dbp2 OS=Aspergillus oryzae GN=dbp2 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32 Identity = 81/226 (35.84%), Postives = 130/226 (57.52%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-PLYSIATSMYEKPSIIGQL--ITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGR 665 P+ LVLAPTRELA Q++ E + S + CVYGG P Q+R L GV+ + TPGR+ID+++ NL V ++VLDEAD+ML +GF + I+ ++ +RQ M+SAT P +R L + +L + + V+ +G D I + + + ++ +I L I E+ +G KC++FT TKR AD + + + + +HGD Q +R+ L+ F+ G+ Sbjct: 204 PIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQVN-IGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMEN-RGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGK 427
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DED1_NEUCR (ATP-dependent RNA helicase ded-1 OS=Neurospora crassa GN=ded-1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.092e-32 Identity = 85/229 (37.12%), Postives = 135/229 (58.95%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVIL--ERLPQ--NRQGMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGR 665 P L+LAPTREL Q+ E + A + VYGG I Q+R ++ G D +V TPGR++DLI+R ++L ++++VLDEAD+ML +GF + I+ E +P+ +RQ +MFSAT P I+ L +LK+ L+V VG + + + + +K S++ ++ HA GG ++F +TKR AD L+ + +++ +HGD +Q +RER L FR+GR Sbjct: 280 PTALILAPTRELVSQIYDEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPKVNDRQTLMFSATFPRDIQILARDFLKDYIFLSVGRVGSTSENITQKVEY----VEDIDKRSVLLDILHTHA-GGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALEMFRNGR 503
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DED1_BOTFB (ATP-dependent RNA helicase ded1 OS=Botryotinia fuckeliana (strain B05.10) GN=ded1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.092e-32 Identity = 85/229 (37.12%), Postives = 133/229 (58.08%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVIL--ERLP--QNRQGMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGR 665 P L+LAPTREL Q+ E + A + VYGG I Q+R ++ G D +V TPGR++DLI+R ++L ++++VLDEAD+ML +GF + I+ E +P QNRQ +MFSAT P I+ L +LK+ L+V VG + + + + +K S++ ++ H G ++F +TKR AD L+ + +++ +HGD +Q +RER L FR+GR Sbjct: 272 PTSLILAPTRELVSQIYDESRKFAYRSWVRPCVVYGGADIGSQLRQMERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPGVQNRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEY----VEDIDKRSVLLDILHTHG-AGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALEMFRNGR 495
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DDX5_PANTR (Probable ATP-dependent RNA helicase DDX5 OS=Pan troglodytes GN=DDX5 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.092e-32 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGR 665 P+CLVLAPTRELA+QV++ E A L + C+YGG P Q+R L+ GV+ + TPGR+ID ++ NL ++VLDEAD+ML +GF + I++++ +RQ +M+SAT P +R L +LK+ + ++ +G + I EK + +L+ E K K IVF +TKR D L M + + +HGD SQ +R+ L+ F+ G+ Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVENCIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGK 391
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DBP2_NEOFI (ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.092e-32 Identity = 80/226 (35.40%), Postives = 129/226 (57.08%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-PLYSIATSMYEKPSIIGQL--ITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGR 665 P+ L+LAPTRELA Q++ E + S + CVYGG P Q+R L GV+ + TPGR+ID+++ NL V ++VLDEAD+ML +GF + I+ ++ +RQ M+SAT P +R L +L + + V+ +G D I + + + ++ +I L I E+ +G KC++FT TKR AD + + + + +HGD Q +R+ L+ F+ G+ Sbjct: 193 PIVLILAPTRELAVQIQTEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQVN-IGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMEN-RGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGK 416
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: RH5_ORYSJ (DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica GN=Os07g0301200 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32 Identity = 83/224 (37.05%), Postives = 128/224 (57.14%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHES-AP-SLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYL-KNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEH-AKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDG 662 P LVL+PTRELA+Q+ E+ AP + ++C+YGGT Q+ AL GVD V+GTPGR+ DLI+ L++V FVVLDEAD+ML +GF +V IL + RQ +MFSAT PP + L +++ NP+ V + + D + + + ++ L H A+ + +VF KR+A R+ + + ++ +HGD +Q R + LS F++G Sbjct: 168 PRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFVLYKREATRVETMLQRRGWSAVSVHGDKAQHDRTKALSLFKEG 391
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DED1_SCLS1 (ATP-dependent RNA helicase ded1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=ded1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32 Identity = 85/229 (37.12%), Postives = 133/229 (58.08%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVIL--ERLP--QNRQGMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGR 665 P L+LAPTREL Q+ E + A + VYGG I Q+R ++ G D +V TPGR++DLI+R ++L ++++VLDEAD+ML +GF + I+ E +P QNRQ +MFSAT P I+ L +LK+ L+V VG + + + + +K S++ ++ H G ++F +TKR AD L+ + +++ +HGD +Q +RER L FR+GR Sbjct: 272 PTSLILAPTRELVSQIFDESRKFAYRSWVRPCVVYGGADIGSQLRQMERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPGVQNRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEY----VEDIDKRSVLLDILHTHG-AGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALEMFRNGR 495
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DED1_PICST (ATP-dependent RNA helicase DED1 OS=Pichia stipitis GN=DED1 PE=3 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32 Identity = 87/229 (37.99%), Postives = 133/229 (58.08%), Query Frame = 3 Query: 3 NPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP----QNRQGMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDG 662 +P LV+APTREL Q+ E + A + VYGG I Q+R LD G D +V TPGR+ DL++R ++L+ ++++VLDEAD+ML +GF + I++ Q+RQ +MFSAT P I+ L +LK+ L+V VG + + + I + EK S++ L++ G I+FT+TKR AD LA + + + +HGD SQ +RE+ L+AF+ G Sbjct: 251 HPTILVMAPTRELVSQIYDEAKKFAYRSWVKPAVVYGGADIGQQIRNLDKGCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMGFEPQIRHIVQECDMPDVQDRQTLMFSATFPTDIQMLARDFLKDYIFLSVGRVGSTSENITQKI----LYVEDEEKKSVLLDLLSA-GDAGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSG 474 The following BLAST results are available for this feature:
BLAST of DY258881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258881 ID=DY258881; Name=DY258881; organism=Citrus clementina; type=EST; length=671bpback to top |