DY259707

Overview
NameDY259707
Unique NameDY259707
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length979
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: AX22D_PHAAU (Auxin-induced protein 22D OS=Phaseolus aureus GN=AUX22D PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.388e-37
Identity = 83/153 (54.25%), Postives = 97/153 (63.40%), Query Frame = 1
Query:  160 EPTSAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 618
            E    P AKAQVVGWPPIRS+RKN +     K  + +EG      +YVKVSM GAPYLRK+DLK+Y +Y EL  ALE MF C      +  G                +GSEY  TYED+DGDWMLVGDVPW+MF  +C+RLRIMKGSEA GL
Sbjct:   60 EDNVVPPAKAQVVGWPPIRSYRKNNVQQ---KKEEESEGNG----MYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCIFGEYSEREGY---------------NGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIMKGSEAKGL 190          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.039e-37
Identity = 89/189 (47.09%), Postives = 115/189 (60.85%), Query Frame = 1
Query:   55 GLDDKCKIVKEVDVLPLSPKPVQEKKNQVPALNENEPT-SAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 618
            G D+ C+  + V     + K V     +    + +  T ++P  KAQ+VGWPP+RS+RKN + S   KN    EG+     +YVKVSMDGAPYLRK+DL  Y  Y EL  ALE MF  F++G+        +DG           GS++V TYED+DGDWML+GDVPW+MF  TC+RLRIMKGSEA GL
Sbjct:   18 GTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQIVGWPPVRSYRKNNIQSK--KNESEHEGQG----IYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFK-FSVGEYFE-----RDGYK---------GSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: AX22E_PHAAU (Auxin-induced protein 22E OS=Phaseolus aureus GN=AUX22E PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.618e-36
Identity = 82/156 (52.56%), Postives = 103/156 (66.03%), Query Frame = 1
Query:  151 NENEPTSAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 618
            + NE +  PA K QVVGWPPIRSFRKN++    V+  D      G+G +Y+KVSM GAPYLRK+DLK+Y +Y EL  AL+ +F C T G+                  +  +GSEY  TYED+DGDWMLVGDVPW+MF  +C+RLRI+KGSEA GL
Sbjct:   68 DHNEDSVQPA-KVQVVGWPPIRSFRKNSLQQKKVEQGD------GTG-MYLKVSMAGAPYLRKIDLKVYKSYPELLKALQNLFKC-TFGEYSER--------------EGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIIKGSEAKGL 200          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: AX22B_PHAAU (Auxin-induced protein 22B OS=Phaseolus aureus GN=AUX22B PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.419e-36
Identity = 86/153 (56.21%), Postives = 101/153 (66.01%), Query Frame = 1
Query:  160 EPTSAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 618
            E  SAP  KA++VGWPPIRS+RKN++           EG+ G G ++VKVSMDGAPYLRKVDLK+Y  Y EL  ALE MF    IG+        ++G           GSEY  TYED+DGDWMLVGDVPWDMF  +C+RLRIMKGSEA GL
Sbjct:   67 ETVSAPPPKAKIVGWPPIRSYRKNSVQ----------EGE-GDG-IFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFK-LAIGEYSE-----REGYK---------GSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGL 192          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.832e-36
Identity = 80/151 (52.98%), Postives = 101/151 (66.89%), Query Frame = 1
Query:  166 TSAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 618
            ++AP AKA++VGWPPIRS+RKN++             ++  G ++VKVSMDGAPYLRK+DL++Y  Y EL  ALE MF   TIG+        ++G           GSEY  TYED+DGDWMLVGDVPWDMF  +C+RLRIMKG+EA GL
Sbjct:   62 SAAPPAKAKIVGWPPIRSYRKNSLH------------EADVGGIFVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFK-LTIGEYSE-----REGYK---------GSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGL 185          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 8.421e-35
Identity = 86/188 (45.74%), Postives = 104/188 (55.32%), Query Frame = 1
Query:   55 GLDDKCKIVKEVDVLPLSPKPVQEKKNQVPALNENEPTSAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 618
            G  +K K  +EV  +  + K + E+         +E  S P  K Q+VGWPP+RS RKN        NN  +         YVKVSMDGAPYLRK+DLK Y NY EL  ALE MF       C+  G  G               S +V TYED+DGDWMLVGDVPWDMF+ +C+RLRIMKGS+A  L
Sbjct:   22 GRTEKIKEEQEVSCVKSNNKRLFEE-------TRDEEESTPPTKTQIVGWPPVRSSRKN--------NNSVS---------YVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKG---------------SGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 8.421e-35
Identity = 86/202 (42.57%), Postives = 118/202 (58.42%), Query Frame = 1
Query:   28 GAVLYSPRGGLD-DKCKIVKEVDVLPLSPKPVQEKKNQVPALNENEPTSAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMF-SCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPR 627
            GA    P  GLD D   +   +     S     + + +  A  ++     P+ KA+ VGWPP+R++R+N +        D+A  K       VKV++DGAPYLRKVDL  ++ Y  L  AL  MF SC  +      G  G DG   ++L+DL+ G+EYV TYED+DGDWMLVGDVPW MF E+C+R+R+MK SEA+ L+PR
Sbjct:    6 GADSSPPVSGLDYDDTALTLALPGSSSSSSSTADPERKRAAHADHADAKPPSPKARAVGWPPVRAYRRNAL------REDSARAK------LVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAV-----RGGGGGDG-EGTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA31_ORYSJ (Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica GN=IAA31 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.100e-34
Identity = 83/161 (51.55%), Postives = 102/161 (63.35%), Query Frame = 1
Query:  172 APAAKAQVVGWPPIRSFRKN----TMASNLVKNNDAA--------EGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 618
            A AAKAQVVGWPP+RS+RK+    T  +   K   AA        E  +G+G L+VKVSMDGAPYLRK+DLK+Y  Y EL  ALE MF CF+ G      +               + S++ +TYED+DGD MLVGDVP++MF  TC+RLRIMKGSEA GL
Sbjct:   47 AAAAKAQVVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGGAAADAAV---------------NPSDFAVTYEDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGL 192          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 1.100e-34
Identity = 79/153 (51.63%), Postives = 97/153 (63.40%), Query Frame = 1
Query:  151 NENEPTSAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEA 609
            +  E ++ P AK Q+VGWPP+RS RKN    N+                YVKVSMDGAPYLRK+DLK+Y NY EL  ALE MF  FT+G+        ++G           GS +V TYED+DGDWMLVGDVPWDMF+ +C++LRIMKGSEA
Sbjct:   42 DSTEESAPPPAKTQIVGWPPVRSNRKNNNNKNVS---------------YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFK-FTVGEYSE-----REGYK---------GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 2.450e-34
Identity = 79/163 (48.47%), Postives = 104/163 (63.80%), Query Frame = 1
Query:  130 KNQVPALNENEPTSAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 618
            + ++ +  + E  S P  KAQ+VGWPP+RS+RKN    N+      +EG+      YVKVSMDGAPYLRK+DL +Y  Y EL  +LE MF  F++G+        ++G           GS++V TYED+DGDWMLVGDVPW+MF  +C+RLRIMKGSE  GL
Sbjct:   44 EKEIESTGKTETASPP--KAQIVGWPPVRSYRKN----NVQTKKSESEGQGN----YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK-FSVGEYFE-----REGYK---------GSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181          
The following BLAST results are available for this feature:
BLAST of DY259707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
AX22D_PHAAU1.388e-3754.25Auxin-induced protein 22D OS=Phaseolus aureus GN=A... [more]
IAA3_ARATH4.039e-3747.09Auxin-responsive protein IAA3 OS=Arabidopsis thali... [more]
AX22E_PHAAU2.618e-3652.56Auxin-induced protein 22E OS=Phaseolus aureus GN=A... [more]
AX22B_PHAAU3.419e-3656.21Auxin-induced protein 22B OS=Phaseolus aureus GN=A... [more]
IAA4_PEA5.832e-3652.98Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA... [more]
IAA2_ARATH8.421e-3545.74Auxin-responsive protein IAA2 OS=Arabidopsis thali... [more]
IAA23_ORYSJ8.421e-3542.57Auxin-responsive protein IAA23 OS=Oryza sativa sub... [more]
IAA31_ORYSJ1.100e-3451.55Auxin-responsive protein IAA31 OS=Oryza sativa sub... [more]
IAA1_ARATH1.100e-3451.63Auxin-responsive protein IAA1 OS=Arabidopsis thali... [more]
IAA4_ARATH2.450e-3448.47Auxin-responsive protein IAA4 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DB11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259707 ID=DY259707; Name=DY259707; organism=Citrus clementina; type=EST; length=979bp
GGTAAACCTGATGCCGAGTTGGGTAAAGGTGCTGTCTTGTATTCTCCTAG
AGGTGGGTTAGATGATAAGTGCAAGATCGTGAAGGAAGTTGATGTCTTGC
CTCTGTCTCCTAAGCCAGTTCAAGAGAAGAAGAATCAAGTCCCTGCTTTA
AATGAAAATGAACCAACTAGTGCCCCTGCTGCAAAGGCACAGGTGGTGGG
ATGGCCACCAATTCGATCTTTCCGGAAGAACACCATGGCCTCTAATTTGG
TAAAGAACAATGATGCCGCTGAAGGCAAGTCGGGATCTGGATGTCTCTAT
GTAAAGGTTAGCATGGATGGTGCTCCATATCTAAGGAAGGTTGATCTCAA
AATCTACAGCAATTACATGGAACTCTCTTCAGCTCTTGAGAAGATGTTCA
GCTGCTTTACCATTGGGCAATGTGATTCTCATGGTCTTCCGGGGCAAGAC
GGCCTAAGTGAGAGTCGTCTGATGGATCTTCTCCATGGTTCTGAATATGT
GCTTACATATGAAGACAGGGATGGTGACTGGATGCTTGTTGGTGATGTCC
CTTGGGATATGTTCACTGAGACGTGTAGAAGACTTCGCATCATGAAAGGT
TCAGAGGCTATTGGACTGGCTCCAAGGGCCATGGAGAAGTGCAAGAACCG
AACTTAGTGTCGCAAATATCTTGAAAGACTTAAAAAGGGAGAAAATTTGT
TTTTTTCAGAATCCAAACACGTGAAAAGATGTTAGGCATTTTTGTCAAGG
ACCCTATTATTATATAAATGTTATCAAATATCATAAGTTTGCTGTATTTA
ATTAGTTAATATGGGGAAAACATCCCTCTAAACAAGATAGCACTGCAAAC
ATATCCGTTTCACGTTTGTTTTAGTATTATATTTTGTCCTCCTTTACTTT
TCCGGGAAATTTTTTTATTTGGGAACAAAATATAAATGATTTGCTTGTTG
GTTTCCAGTTTGCCACTCTTCCCTGTTTA
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