DY259772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_BACAN (50S ribosomal protein L2 OS=Bacillus anthracis GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.109e-16 Identity = 55/154 (35.71%), Postives = 86/154 (55.84%), Query Frame = 2 Query: 371 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFGPKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLR 832 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTS + L + + L+RL SG+ +L + C+AT+G V N +H + K G + W G K R + + G G G++ I + P GKP T G K R Sbjct: 114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRSRWLG-KRPTVRGSVMNPVDHPHGGGEGRSPIGRKSPMS---PWGKP--TLGFKTR 260
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_BACAH (50S ribosomal protein L2 OS=Bacillus thuringiensis (strain Al Hakam) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.109e-16 Identity = 55/154 (35.71%), Postives = 86/154 (55.84%), Query Frame = 2 Query: 371 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFGPKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLR 832 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTS + L + + L+RL SG+ +L + C+AT+G V N +H + K G + W G K R + + G G G++ I + P GKP T G K R Sbjct: 114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRSRWLG-KRPTVRGSVMNPVDHPHGGGEGRSPIGRKSPMS---PWGKP--TLGFKTR 260
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_BACAC (50S ribosomal protein L2 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.109e-16 Identity = 55/154 (35.71%), Postives = 86/154 (55.84%), Query Frame = 2 Query: 371 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFGPKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLR 832 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTS + L + + L+RL SG+ +L + C+AT+G V N +H + K G + W G K R + + G G G++ I + P GKP T G K R Sbjct: 114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRSRWLG-KRPTVRGSVMNPVDHPHGGGEGRSPIGRKSPMS---PWGKP--TLGFKTR 260
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_BACAA (50S ribosomal protein L2 OS=Bacillus anthracis (strain A0248) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.109e-16 Identity = 55/154 (35.71%), Postives = 86/154 (55.84%), Query Frame = 2 Query: 371 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFGPKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLR 832 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTS + L + + L+RL SG+ +L + C+AT+G V N +H + K G + W G K R + + G G G++ I + P GKP T G K R Sbjct: 114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRSRWLG-KRPTVRGSVMNPVDHPHGGGEGRSPIGRKSPMS---PWGKP--TLGFKTR 260
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_AZOC5 (50S ribosomal protein L2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.109e-16 Identity = 56/165 (33.94%), Postives = 91/165 (55.15%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFGPKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLRS 835 P++ V DK++ A ++ + G+ PL+ + +GTI+HN+E+ G+GG++ R+AG S + + ++RL SG+++L C AT+G VSNP+H +L K G + W G V N + + G G+ + G GR + P GKP T G+K RS Sbjct: 107 PQRLAVGDKVI---AGEQVDVKPGNAAPLSNLPVGTIVHNVEMKIGKGGQIARSAG-SYAQIVGRDQGYVIVRLNSGEQRLIHGACYATVGAVSNPDHMNTSLGKAGRSRWLG---VKPHNRGVTMNPVDHPHGGGEGRTSG--GRHPVTPWGKP--TKGMKTRS 260
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RK2_CHAVU (50S ribosomal protein L2, chloroplastic OS=Chara vulgaris GN=rpl2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.109e-16 Identity = 59/162 (36.42%), Postives = 83/162 (51.23%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFG--PKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWG 820 P+ + D I+ M D + +G+ +PL + +GT IHNIE+ PG+GG+LVRAAGT + + + + +RLPSG+ +L KC ATIG V NP +++ K G W G PK NP G G G+ I GR +PL WG Sbjct: 107 PRGIKIGDTILSSM---DASIFVGNTLPLTQIPLGTAIHNIELQPGKGGQLVRAAGTVAQVVAK-EGKWTSIRLPSGEVRLIYQKCLATIGQVGNPEFNNQSIGKAGSKRWQGKRPKVRGTAMNPVDH---PHGGGEGRTSI----GR------KRPLTPWG 251
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_GEOTN (50S ribosomal protein L2 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.862e-16 Identity = 41/103 (39.81%), Postives = 66/103 (64.08%), Query Frame = 2 Query: 371 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFG 679 M M+ + + ++G+ +PL + +GT++HNIE+ PG+GG+LVRAAGTS + L + + ++RL SG+ ++ KC+AT+G V N H N+ K G W G Sbjct: 114 MEIMSGPNADIKVGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGK-EGKYVIIRLASGEVRMILGKCRATVGEVGNEQHELVNIGKAGRARWLG 215 HSP 2 Score: 21.1718 bits (43), Expect = 8.862e-16 Identity = 7/13 (53.85%), Postives = 9/13 (69.23%), Query Frame = 1 Query: 718 LNHPQGEGEGTKP 756 ++HP G GEG P Sbjct: 228 VDHPHGGGEGKAP 240
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_RHOPS (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.059e-15 Identity = 60/165 (36.36%), Postives = 91/165 (55.15%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFGPKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLRS 835 P++ +V D ++ ++VD+ G+ MPL M +GTI+HNIE+ G+GG++ R+AGT + L + ++RL SG+++L +C ATIG VSNP+H ++ K G W G + N I G G+ + G GR + P GKP T G K RS Sbjct: 107 PQRLSVGDSVIAG-SYVDVKP--GNVMPLGNMPVGTIVHNIELKIGKGGQIARSAGTYAQ-LVGRDHDYVIVRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRKRWLGRR---PHNRGVVMNPIDHPHGGGEGRTSG--GRHPVTPWGKP--TKGKKTRS 260
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_BREBN (50S ribosomal protein L2 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.059e-15 Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFG--PKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLR 832 P V D+I+ + D + +IG+ +P+ + +GT IHNIE+ PG+GG+LVRAAGTS + L F ++RL SG+ + C+ATIG V N +H N+ K G + W G P NP G G G+ I + + P GKP T G+K R Sbjct: 107 PHNLKVGDQIV---SGADADIKIGNALPMEKIPVGTTIHNIELKPGKGGQLVRAAGTSAQLLGR-DGEFVIVRLSSGETRRIHNVCRATIGQVGNLDHELLNIGKAGRSRWLGIRPTVRGSVMNPNDH---PHGGGEGRAPI---GRKAPVTPWGKP--TLGLKTR 260
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_BRASB (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.059e-15 Identity = 60/165 (36.36%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFGPKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLRS 835 P++ V D I+ +VD+ G+ MPL M +GTI+HNIEV G+GG+L R+AGT + + + ++RL SG+++L +C+ TIG VSNP+H ++ K G W G + N + I G G+ + G GR + P GKP T G K R+ Sbjct: 107 PQRLAVGDTIVAGN-YVDVKP--GNVMPLGNMPVGTIVHNIEVKIGKGGQLARSAGTYAQ-IVGRDQDYVIVRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRR---PHNRGVAMNPIDHPHGGGEGRTSG--GRHPVTPWGKP--TKGKKTRT 260 The following BLAST results are available for this feature:
BLAST of DY259772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259772 ID=DY259772; Name=DY259772; organism=Citrus clementina; type=EST; length=1125bpback to top |