DY259779

Overview
NameDY259779
Unique NameDY259779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length888
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.972e-29
Identity = 59/108 (54.63%), Postives = 80/108 (74.07%), Query Frame = 1
Query:  532 SGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPAS 855
            SGG  S++GK   GY+S  GKR++MEDF++ +   ++G+ V +FGVFDGHGG+RAAEY+K HLF NL+ HP+F++DTK AI++ Y  TD   LKSE +  RD GS AS
Sbjct:   22 SGGGLSQNGKFSYGYASSAGKRSSMEDFFETRIDGINGEIVGLFGVFDGHGGARAAEYVKRHLFSNLITHPKFISDTKSAITDAYNHTDSELLKSENSHNRDAGSTAS 129          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.738e-28
Identity = 62/125 (49.60%), Postives = 91/125 (72.80%), Query Frame = 1
Query:  481 GPIVDVLPEKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPAS 855
            G +  V+P    DG  VSGG  S++GK   GY+S  GKRA+MEDFY+ +  +VDG+ + +FGVFDGHGG++ AEY+K++LF +LL+HP+F++DTK+AI + Y+ TD  FL+S+ ++    GS AS
Sbjct:    2 GYLSSVIPT---DGSPVSGGGLSQNGKFSYGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLESD-SSQNQCGSTAS 122          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.429e-24
Identity = 52/99 (52.53%), Postives = 72/99 (72.73%), Query Frame = 1
Query:  559 KLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPAS 855
            K   GYSS +GKRATMED+++ + S+V+G+ V  FGVFDGHGG+R AEYLK +LF+NL+ H  F++DTK AI E ++QTD  +L  E    ++ GS A+
Sbjct:  121 KFSYGYSSLKGKRATMEDYFETRISDVNGQMVAFFGVFDGHGGARTAEYLKNNLFKNLVSHDDFISDTKKAIVEVFKQTDEEYLIEEAGQPKNAGSTAA 219          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15
Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 1
Query:  532 SGGWKSEDGKLRCGYSSFRGK-RATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPA 852
            SG  ++ +G ++ G+S  +GK   +MED++  K +N +G  + +F +FDGH G   A YL++HLF N+LK  +F+ D + AI++ Y+ TD   L   R      GS A
Sbjct:   21 SGKGRNGEGGIKYGFSLIKGKSNHSMEDYHVAKFTNFNGNELGLFAIFDGHKGDHVAAYLQKHLFSNILKDGEFLVDPRRAIAKAYENTDQKILADNRTDLESGGSTA 128          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13
Identity = 36/90 (40.00%), Postives = 56/90 (62.22%), Query Frame = 1
Query:  532 SGGWKSEDGKLRCGYSSFRGK-RATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTD 798
            SG  ++ DG+++ GYS  +GK    MED++  K   +DG  + +F ++DGH G R   YL++HLF N+LK  QF  D + +I   Y++TD
Sbjct:   23 SGKGRNNDGEIKFGYSLVKGKANHPMEDYHVSKFVKIDGNELGLFAIYDGHLGERVPAYLQKHLFSNILKEEQFRYDPQRSIIAAYEKTD 112          
The following BLAST results are available for this feature:
BLAST of DY259779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
P2C69_ARATH5.972e-2954.63Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C45_ORYSJ1.738e-2849.60Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C11_ARATH4.429e-2452.53Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
P2C17_ARATH1.687e-1537.04Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]
P2C10_ARATH2.693e-1340.00Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YC19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259779 ID=DY259779; Name=DY259779; organism=Citrus clementina; type=EST; length=888bp
CTCCATCGCTCCAGAGAGAGAAAGAAATTGCAACACCAACATCTACTCAC
CTGCTTCCACGTGTCCCATCATCCGACCCGAAACCGATCACCACCCCGCT
CCCCCTCCGATCCGATCCGCCTTCCAAACTAGATCTGTAATTTGCTTTGA
ATATTCTGGTCCCCATTTCAAAAAAAAAGAAGAAGCAATCTTTATTTCAA
AAAGCTTCATTTTATGACTCCAATAGTTTAAAAAAATTGTTGTGTTATTG
TGGGGTTGGTGATCTGGCATTGAAGGCCGGAGTGAATAATTTAGATGTTA
TGCAACAGTTATATAAGGACTGTGATTGTGCGAGTTGTGAATATTGGATC
GTTTACGAGAACGAGGCTGGAATTAAGCAACATAAACAAGAGTTTGCATG
CGGGTCTTCGTGTAGGCTATACTTGGAATCGAGAATTTAGAAAGAGCTCC
AAGATGATGGTTGATTCGGCAGCGAAGCGGGGACCCATTGTCGATGTATT
ACCCGAGAAAGAGGATGACGGTGGTTATGTCAGCGGAGGGTGGAAAAGTG
AAGATGGAAAACTGAGATGTGGATACTCAAGTTTTAGGGGAAAGAGGGCA
ACTATGGAGGATTTCTATGACATTAAAACTTCCAATGTTGATGGGAAAGC
TGTCTGCATGTTTGGAGTCTTTGATGGTCATGGTGGTTCCCGTGCGGCTG
AGTATTTGAAGGAGCACCTCTTTGAGAATCTCTTGAAGCATCCACAATTT
ATGACAGACACCAAATTGGCTATAAGTGAAACATATCAACAGACTGATGT
CCACTTTTTGAAATCTGAAAGAAATACTTACAGGGATGATGGTTCTCCGG
CTTCACGGCCTGATTGGTTGGTAACCATCCTAAATGTG
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