DY259789

Overview
NameDY259789
Unique NameDY259789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length915
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.891e-24
Identity = 79/242 (32.64%), Postives = 112/242 (46.28%), Query Frame = 3
Query:   36 IPVID----LSTDPK---QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLG--FRELCEDYAR---EVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +P+ID    LS DP    ++   VG AC++ GFFQV+NHG  +EL A   +    FF  P+ EKQ+  R      GY      +  +   WKE   F        P+ P         L   +    LG   R L E YAR   E+ +                    + +F+   + +R NYYPPC  P   LG GPH D  +LT+L QD+VGGLQ+   + G W  + P  DA++++IG+
Sbjct:   39 VPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSF-----RSCPSDPA--------LVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQV--HTEGRWRSIRPRADAFVVNIGD 265          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.891e-24
Identity = 72/240 (30.00%), Postives = 110/240 (45.83%), Query Frame = 3
Query:   27 DDEIPVIDL------STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKV-KRDEVHPMGYHDQEH--TKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            D  IP IDL      S   + LV ++G A +KWGFFQVINHG P ++  ++    +EF +Q  E K+    RD    M Y       +    +W++    +       P  P P+D             P    E+  +Y++EV K                 + L+      +  L  +YYPPCP P+L LG+  H D   LT+L QD +GGLQ+    +  W+ V P+P A ++++G+
Sbjct:   59 DFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTA-----PDPPRPED------------LPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQV--LHDQYWVDVPPVPGALVVNVGD 279          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.031e-23
Identity = 75/239 (31.38%), Postives = 118/239 (49.37%), Query Frame = 3
Query:   33 EIPVIDLST---DPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQ-PIEEKQKVKR----DEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXA-DRLQGYFKEQTTF-LRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            E+PVID+S    D ++LV E+  A ++WG FQVINHG P E+   ++K  KEFF++ P EEK+ + +      +   G   Q+  +  + W +     +  P+ +                 WP+ P  +RE  E+YA+ + K                  + ++    E   + L+ NYYPPCP P+LALGV  H D   +T+L  ++V   Q+ K  +G W  V  IP+A I+ IG+
Sbjct:   56 EVPVIDISNVDDDEEKLVKEIVEASKEWGIFQVINHGIPDEVIENLQKVGKEFFEEVPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAIN-------------YRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVPNEV---QVFK--DGHWYDVNYIPNAIIVHIGD 276          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.346e-23
Identity = 79/239 (33.05%), Postives = 113/239 (47.28%), Query Frame = 3
Query:   33 EIPVIDLSTD---PKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDE----VHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYA---REVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ++PVIDL +     + LV  +  A ++WG FQV+NHG P +  A+++K  KEFF+ P +EK+ + + E    V   G   Q+     + W         D  F    P+          N WP  P  +RE  E+YA   R V                    +  G   +    L+ NYYPPCP P+LALGV  H D  A+T+L  ++V GLQ+ K  +  W  V  IP+A II IG+
Sbjct:   42 QVPVIDLGSSNNTEENLVELIAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWV--------DHLFHIIWPKSAVNY-----NFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGG-DDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVHK--DDHWYDVKYIPNALIIHIGD 264          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 65/236 (27.54%), Postives = 112/236 (47.46%), Query Frame = 3
Query:   30 DEIPVIDLS----TDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +EIPVI L+        ++  E+  AC+ WG FQV++HG  ++L + +   A++FF  P +EK +         G+    H +   V+DW+E+  ++                   R  ++WP+ P  +R + E+Y++ +                   + L     +    +  NYYP CP P+L LG+  H D G +T+L QD VGGLQ  +     WI V P+  A+++++G+
Sbjct:   36 NEIPVISLAGIDGCRRAEICDEIVKACEDWGIFQVVDHGVDTKLLSDMTGLARDFFHLPTQEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIK-------------ARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGESWITVKPVEGAFVVNLGD 258          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23
Identity = 68/236 (28.81%), Postives = 107/236 (45.34%), Query Frame = 3
Query:   30 DEIPVIDL----STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            D +P+I L         Q+   V  AC+ WG FQVI+HG  ++L A + + A+EFF  P E+K +         G+    H +   V+DW+E+  ++                   R   +WPE P G+  + E Y+  +                   + L     +    +  N+YP CP P+L LG+  H D G +T+L QD VGGLQ  +     WI V PI  A+++++G+
Sbjct:   41 DAVPLISLHGIDGARRAQIRDRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVK-------------ARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGD 263          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23
Identity = 75/243 (30.86%), Postives = 115/243 (47.33%), Query Frame = 3
Query:   33 EIPVIDL----STDPK---QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDE----VHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQ---GYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ++P IDL    S D K     + E+  A   WG   +INHG P++L  R++KA +EFF   +EEK+K   D+    +   G     +     +W++ F F L  P            E +R  + WP+ P  + E   +YA+ +                   DRL+   G  +E    ++ NYYP CP PELALGV  H D  ALT +  + V GLQ+  +  G+W+    +PD+ ++ IG+
Sbjct:   46 QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYF-FHLAYP------------EEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYE--GKWVTAKCVPDSIVMHIGD 273          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 5.114e-23
Identity = 69/238 (28.99%), Postives = 108/238 (45.38%), Query Frame = 3
Query:   27 DDEIPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQ-----GYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            D+ +P+IDLS     +   VGHAC  WG FQ+ NHG PS L   IE      F  P++ K K  R E    GY         N + W E F         +  SP  D ++L      WP + L + E+ E+Y   ++K                   +Q       F+     ++ N+YP CP P+ A+G+  H D   +T+L Q++  GLQ+ +   G W+   P+P + ++++G+
Sbjct:   47 DETLPLIDLSDI--HVATLVGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFT--------VIGSPLHDFRKL------WPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVG-WVTAPPVPGSLVVNVGD 267          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23
Identity = 72/219 (32.88%), Postives = 101/219 (46.12%), Query Frame = 3
Query:   84 VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLG--FRELCEDYAR---EVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            VG AC++ GFFQV+NHG  +EL A   +    FF  P+ EKQ+  R      GY      +  +   WKE   F        P+ P         L   +    LG   R L E YAR   E+ +                    + +F+   + +R NYYPPC  P   LG GPH D  +LT+L QD+VGGLQ+   + G W  + P  DA++++IG+
Sbjct:   62 VGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSF-----RSCPSDPA--------LVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQV--HTEGRWRSIRPRADAFVVNIGD 265          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.488e-22
Identity = 67/228 (29.39%), Postives = 107/228 (46.93%), Query Frame = 3
Query:   36 IPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +P+IDLS    ++   +  A ++ GFFQV+NHG   ++   +E   ++FF  P  +K  +  +E H         T +    K    +W +D   L A P P D  +    N+WP+ P G R++ E +  +                   AD  +G        L  N+YP CP P+ ALG  PH D   +T+L    V GL++  K  G+WI V P P+A++++ G+
Sbjct:   35 LPIIDLSCGRDEVRRSILEAGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGEK----YW-RDCLRL-ACPFPVDDSI----NEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLPGAVNGLEVSYK--GDWIKVDPAPNAFVVNFGQ 250          
The following BLAST results are available for this feature:
BLAST of DY259789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
GAO1D_WHEAT7.891e-2432.64Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
ACCH1_ARATH7.891e-2430.001-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FLS_SOLTU1.031e-2331.38Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FLS_PETCR1.346e-2333.05Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FL3H_CALCH1.758e-2327.54Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_HORVU2.296e-2328.81Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
LDOX_ARATH2.998e-2330.86Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
G3OX2_ARATH5.114e-2328.99Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
GAO1A_WHEAT8.724e-2332.88Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
IDS3_HORVU1.488e-2229.392'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YD05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259789 ID=DY259789; Name=DY259789; organism=Citrus clementina; type=EST; length=915bp
CAAAGGTTCAAAACATTATGGAAATAGATGATGAAATCCCAGTTATTGAT
CTCTCTACCGACCCCAAACAACTTGTCTTGGAAGTTGGCCATGCATGTCA
AAAGTGGGGATTTTTTCAAGTCATCAATCATGGGGCGCCATCAGAATTAA
AGGCCAGGATTGAAAAGGCAGCAAAAGAATTCTTTGATCAACCAATAGAG
GAGAAGCAGAAAGTGAAAAGAGATGAAGTTCATCCTATGGGATATCATGA
CCAGGAGCATACCAAGAATGTTAGGGACTGGAAGGAAGTGTTTGATTTTT
GGTTGCAAGATCCAACTTTTCTCCCAGCTTCTCCTGAGCCTGATGATAAG
GAGCTGAGGAGGCTCACTAACCAATGGCCTGAGTACCCTCTTGGATTTAG
GGAGTTATGTGAGGATTATGCTAGGGAGGTGGAAAAGCTAGCTTACAAGT
TACTGGAACTTATCTCCCTCAGCTTAGGCTTATCTGCTGATCGGTTGCAA
GGCTATTTTAAAGAACAAACAACCTTTCTGCGATTCAACTACTATCCTCC
TTGCCCTTATCCTGAGCTAGCTCTGGGCGTCGGTCCACACAAAGATGGAG
GTGCCTTAACGGTACTTGCTCAAGATGACGTTGGTGGACTTCAAATAAAG
AAGAAATCAAATGGAGAGTGGATTCCTGTTTAACCAATCCCAGATGCCTA
TATTATTAGCATTGGTGAAGCCCCCCCAGTTTGGAACCAATGATAATTAT
GAAAGTCCAAACCCCAAAGTGGTGGGTCAACCCTAAAAAAGGAAAGTTTT
TCGATTCCATTTCTTTCTTCTACCCGCCCAACAACTCATGATGTAAGCTT
TGTAATAAATTTGAAAAAAAGCCAACTCCCGCCAGGGAACGGCAATCTCG
GCGGGGCAAACTCCG
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