DY259789

Overview
NameDY259789
Unique NameDY259789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length915
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.538e-22
Identity = 68/237 (28.69%), Postives = 106/237 (44.73%), Query Frame = 3
Query:   30 DEIPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXAD-----RLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            + IP+IDL  D      ++GHAC+ WG FQ+ NHG P  L   IE      F  P++ K K  R E    GY         N + W E F         +  SP  D ++L      WP++ L + ++ E+Y   ++K                 +      L          L+ N+YP CP P+ A+G+  H D   LT+L Q++  GLQ+ +   G W+ V P P + ++++G+
Sbjct:   55 ENIPLIDL--DHPDATNQIGHACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSARSETGVSGYGVARIASFFNKQMWSEGFT--------ITGSPLNDFRKL------WPQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNNTAGLQVFRDDLG-WVTVPPFPGSLVVNVGD 274          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22
Identity = 71/230 (30.87%), Postives = 114/230 (49.57%), Query Frame = 3
Query:   33 EIPVIDLSTDPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ++PV+DLS   ++LV   V  A + WG FQV+NHG P+EL  R++K  +EFF+ P  EK+   R+     GY  +    +++  K +      D  +L   P P     R     WP+ P  +RE+ E+YAR V+                  + ++         +  N+YPP P+ +   G+ PH D   LT++  +++ GLQ+ K  +  WI V  IP A I++IG+
Sbjct:    1 QVPVVDLSCPDEELVARTVVKASEDWGVFQVVNHGIPTELIQRLQKVGREFFELPEAEKRSCAREAGSVEGY-GRRIELDIKKRKGIV-----DQIYLSTWP-PSSVNYR----YWPKSPPDYREVNEEYARHVKTLSEKIMEWLSEGLGLGREAIK-EVNGCWYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIITNEIPGLQVFK--DDHWIEVEYIPSAIIVNIGD 216          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.385e-22
Identity = 68/241 (28.22%), Postives = 107/241 (44.40%), Query Frame = 3
Query:   24 IDDEIPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTT-------FLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +++ IPVIDLS +P    L +G A + WG FQ+ NHG   +L   IE  +K  FD P E K +    +    GY +   +     + W E F                DD         WP     +  + ++Y  E+EK                 + ++   K + +        +R N+YP CP PE A+G+  H D   LT+L Q + GGLQ+ ++ +G W+ V P P   +++IG+
Sbjct:   45 VEESIPVIDLS-NPDVTTL-IGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTI-------------ADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESG-WVTVEPAPGVLVVNIGD 269          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.645e-22
Identity = 70/242 (28.93%), Postives = 116/242 (47.93%), Query Frame = 3
Query:   33 EIPVIDLST------DPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEV--HPMGYHDQ--EHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQ---GYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ++P IDL        + ++   ++  A  +WG   ++NHG   EL  R++ A + FFDQP+EEK+K   D+   +  GY  +         +W++ F        F  A PE D ++L    + WP+ P  +     +YA+++                    RL+   G  ++    ++ NYYP CP PELALGV  H D  ALT +  + V GLQ+  +  G+W+    +P++ I+ IG+
Sbjct:   51 QVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYF--------FHCAFPE-DKRDL----SIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYE--GQWVTAKCVPNSIIMHIGD 277          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.260e-21
Identity = 70/243 (28.81%), Postives = 116/243 (47.74%), Query Frame = 3
Query:   33 EIPVIDLS---TDPKQLVLEVGHACQK----WGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHP--MGYHDQ--EHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQ---GYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ++P IDL    +D +++  +     +K    WG   ++NHG   EL  ++ KA K FFD PIE+K+K   D+      GY  +   +     +W++ F   +           P+DK   R  + WP+ P  + E   +YA+++ +                  RL+   G  +E    ++ NYYP CP PELALGV  H D  ALT +  + V GLQ+  +  G+W+    +P++ ++ IG+
Sbjct:   50 QVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVY----------PEDK---RDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYE--GKWVTAKCVPNSIVMHIGD 277          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.260e-21
Identity = 66/242 (27.27%), Postives = 111/242 (45.87%), Query Frame = 3
Query:   21 EIDDEIPVIDLS-----TDPK--QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  +EIP+I L+     +D +  ++  ++  AC+ WG FQV++HG  S L + + + ++EFF  P EEK +         G+      +  +  DW+E   ++                   R  ++WP+ P G+R   E Y+ ++                     L     +    +  NYYP CP P+L LGV  H D G +T+L QD VGGLQ  +     WI V P+  A+++++G+
Sbjct:   33 QFSNEIPIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPIN-------------ARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQDMVGGLQATRDGGKTWITVQPVEGAFVVNLGD 261          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.806e-21
Identity = 75/242 (30.99%), Postives = 116/242 (47.93%), Query Frame = 3
Query:   36 IPVIDLST----DPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFF---DQPIEEKQKVK-RDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFK---EQTTFL--RFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            IPVID S     +  + +  + + C++WGFFQ++NHG P EL  R++K + E +   ++  E  + V+  D +   G  D +   NV DW++V  F LQD                   N+WP  P  F E  ++Y  E+ K                   ++  F    +   F   + ++YPPCP  +L  G+  H D G + +L QDD VGGLQ+ K  +G WI V P+ DA +I+ G+
Sbjct:    3 IPVIDFSKLDGKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKLREERFEGSKPVQLLDTLVKEG--DGQRLDNV-DWEDV--FVLQD------------------DNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLK--DGRWIDVQPLADAIVINTGD 219          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.819e-20
Identity = 66/236 (27.97%), Postives = 106/236 (44.92%), Query Frame = 3
Query:   33 EIPVIDLSTDPKQ--LVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADR---LQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            E+ +ID+    ++  +V +VG AC++ GFF V+NHG  + L     +    FF  P+ EKQ+ +R      GY      +  +   WKE   F               +  +R+L     E+     E+   Y  E+ +                 DR    + +F+   + +R NYYP C  P   LG GPH D  +LT+L QD VGGL++   + G W  + P P A ++++G+
Sbjct:   45 EVALIDVGAGAERSSVVRQVGEACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLG---AEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEV--WAEGRWRAIRPRPGALVVNVGD 275          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.103e-20
Identity = 82/296 (27.70%), Postives = 126/296 (42.57%), Query Frame = 3
Query:   33 EIPVIDLST-------DPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTK-NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQ----TTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGEAPPVWNQ**L*KSKPQSGGSTLKKESFSIPFL-----------SSTRPTTHDVSF 851
            E+PVID+S        + ++    +  A ++WGFFQVINHG   ++  ++ +     F +P ++K K ++       +     T      W E F         +P +   D+K+   L++   ++      L    A  + +                + +   +FKE     T +LR N YPPCP P    G+ PH D   LT+L QD VGGLQ+ K  +  WI V P P A II+IG+    W+   + KS      +  K E FS  +            SS RP   + SF
Sbjct:   41 ELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEKFSAGSYRWGTPSATSIRQLSWSEAFH--------VPMTDISDNKDFTTLSSTMEKFASESEALAYMLAEVLAEK---------------SGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIK--DNRWIAVKPNPKALIINIGDLFQAWSN-GMYKSVEHRVMTNPKVERFSTAYFMCPSYDAVIECSSDRPAYRNFSF 310          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.103e-20
Identity = 69/235 (29.36%), Postives = 114/235 (48.51%), Query Frame = 3
Query:   39 PVIDLST---DPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            PV+DLS    + +   LE +  AC+ WGFF+++NHG  +EL   +EK  K+ + + +E++ K   + V   G  D +   +  DW+  F        FL   P  +  E+       P+    +R+  +++A E+EK                   L+  F   K      + + YPPCP P+L  G+  H D G + +L QDD V GLQ+ K  +GEW+ V P+  + +I++G+
Sbjct:    5 PVVDLSLVNGEERAATLEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFK---EMVAAKGLDDVQSEIHDLDWESTF--------FLRHLPSSNISEI-------PDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLK--DGEWVDVPPMHHSIVINLGD 219          
The following BLAST results are available for this feature:
BLAST of DY259789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
G3OX1_ARATH2.538e-2228.69Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
FLS_MATIN5.655e-2230.87Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
G3OX4_ARATH7.385e-2228.22Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
LDOX_PETHY9.645e-2228.93Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_MALDO1.260e-2128.81Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FNSI_PETCR1.260e-2127.27Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
ACCO_MUSAC2.806e-2130.991-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
GAOX1_ORYSJ1.819e-2027.97Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
G2OX8_ARATH3.103e-2027.70Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
ACCO1_MALDO3.103e-2029.361-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YD05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259789 ID=DY259789; Name=DY259789; organism=Citrus clementina; type=EST; length=915bp
CAAAGGTTCAAAACATTATGGAAATAGATGATGAAATCCCAGTTATTGAT
CTCTCTACCGACCCCAAACAACTTGTCTTGGAAGTTGGCCATGCATGTCA
AAAGTGGGGATTTTTTCAAGTCATCAATCATGGGGCGCCATCAGAATTAA
AGGCCAGGATTGAAAAGGCAGCAAAAGAATTCTTTGATCAACCAATAGAG
GAGAAGCAGAAAGTGAAAAGAGATGAAGTTCATCCTATGGGATATCATGA
CCAGGAGCATACCAAGAATGTTAGGGACTGGAAGGAAGTGTTTGATTTTT
GGTTGCAAGATCCAACTTTTCTCCCAGCTTCTCCTGAGCCTGATGATAAG
GAGCTGAGGAGGCTCACTAACCAATGGCCTGAGTACCCTCTTGGATTTAG
GGAGTTATGTGAGGATTATGCTAGGGAGGTGGAAAAGCTAGCTTACAAGT
TACTGGAACTTATCTCCCTCAGCTTAGGCTTATCTGCTGATCGGTTGCAA
GGCTATTTTAAAGAACAAACAACCTTTCTGCGATTCAACTACTATCCTCC
TTGCCCTTATCCTGAGCTAGCTCTGGGCGTCGGTCCACACAAAGATGGAG
GTGCCTTAACGGTACTTGCTCAAGATGACGTTGGTGGACTTCAAATAAAG
AAGAAATCAAATGGAGAGTGGATTCCTGTTTAACCAATCCCAGATGCCTA
TATTATTAGCATTGGTGAAGCCCCCCCAGTTTGGAACCAATGATAATTAT
GAAAGTCCAAACCCCAAAGTGGTGGGTCAACCCTAAAAAAGGAAAGTTTT
TCGATTCCATTTCTTTCTTCTACCCGCCCAACAACTCATGATGTAAGCTT
TGTAATAAATTTGAAAAAAAGCCAACTCCCGCCAGGGAACGGCAATCTCG
GCGGGGCAAACTCCG
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