DY259789

Overview
NameDY259789
Unique NameDY259789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length915
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.052e-20
Identity = 68/238 (28.57%), Postives = 111/238 (46.64%), Query Frame = 3
Query:   30 DEIPVIDLST---DPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  P+I+L     + + + +E +  AC+ WGFF+ +NHG   EL  ++EK  KE + + +EE+ K   + +   G        N  DW+  F         LP S   D           P+    +R L +D+A ++EK                   L+  F   K  T   + + YPPCP P+L  G+  H D G + +L QDD V GLQ+ K  +GEW+ V P+  + ++++G+
Sbjct:    2 ESFPIINLEKLNGEERAITMEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFK---ESIKNRGLDSLRSEVNDVDWESTFYL-----KHLPVSNISD----------VPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLK--DGEWVDVPPVKHSIVVNLGD 219          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.912e-20
Identity = 69/243 (28.40%), Postives = 103/243 (42.39%), Query Frame = 3
Query:   33 EIPVIDL-------STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQ--EHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLG-----FRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ++P+IDL       S    +    V  A  K GFF + NHG    L +R       FF  P  EKQK +R      GY         +   WKE   F             P++K   +    +    +G     F ++ ++YA  +                      + +F++  +  R NYYP C  PELALG GPH D  +LT+L QD VGGLQ+    + +W  + P P A++++IG+
Sbjct:   57 QVPLIDLAGFLSGDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPACEKQKAQRKWGESSGYASSFVGRFSSKLPWKETLSFKFS----------PEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQV--FVDNKWQSIPPNPHAFVVNIGD 287          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.912e-20
Identity = 67/235 (28.51%), Postives = 114/235 (48.51%), Query Frame = 3
Query:   39 PVIDLST---DPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            P+I+L     D +  +LE +  ACQ WGFF+++NHG P E    +EK  ++ + + +EE+ K   + V   G    +   N  DW+  F        FL   PE +  ++  L  +       ++++ +++A+++E                    L+  F   K  T   + + YPPCP P+L  G+  H D G + +L QDD V GLQ+ K  +G WI V P+  A ++++G+
Sbjct:    5 PIINLENINDDGRAKILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFK---ETVLSKGLEAAQAEVNDMDWESTF--------FLRHLPESNISQMSDLDEE-------YKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DGNWIDVPPMRHAIVVNLGD 219          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.540e-19
Identity = 69/238 (28.99%), Postives = 104/238 (43.70%), Query Frame = 3
Query:   36 IPVIDLSTDPKQ-------LVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIE-EKQKVKRDEVHPMGY--HDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            IP IDL     Q        + E+  A  KWGFFQVINHG   EL  +++K  ++F +Q  E  K+   RD      Y  +    +    +W++ F       T  P +P+P D             P   R++  +Y+++V                   + L      +   +  +YYPPCP P+L LG   H D   LTVL  D + GLQ++++  G W  V  +  A II+IG+
Sbjct:   64 IPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFSC-----TMAPDTPKPQD------------LPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRRE--GHWFDVPHVSGALIINIGD 282          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.627e-19
Identity = 69/239 (28.87%), Postives = 103/239 (43.10%), Query Frame = 3
Query:   30 DEIPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELC---EDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQ------TTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            D +PV+D+  DP      VG A Q WG F ++ HG P +L  R+E A    F  P  EK +  R      GY     +            W +  TF PA+   D   LR+L   WP+    +R  C   E++ RE+                   +++     EQ      T  +  N+YP CP P+ ALG+  H D G  T + Q  V GLQ+ +     W+ V  +P A ++++G+
Sbjct:   47 DAVPVVDMR-DPFAAEA-VGLAAQDWGAFLLVGHGVPLDLLVRVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKC-----MWSEGYTFSPANLRSD---LRKL---WPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGD 272          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.627e-19
Identity = 71/242 (29.34%), Postives = 118/242 (48.76%), Query Frame = 3
Query:   18 MEIDDEIPVIDLST---DPKQLVL-EVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ME+D   PVI+++    + +  VL ++  AC+ WGFF+++NHG   EL  ++EK  KE + + +E++ K   + V   G    E   N  DW+  F        FL   P  +  E+  L  +       ++++ +++A E+EK                   L+  F   K      + + YPPCP PEL  G+  H D G L +L QDD V GL + K  +G+W+ V P+  + +I++G+
Sbjct:    1 MEMD--FPVINMNNLNGESRVSVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFK---EMVASKGLDSVETEINDTDWESTF--------FLRHLPVSNMSEIGDLDEE-------YKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLK--DGKWVDVPPMHHSIVINLGD 220          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.480e-19
Identity = 64/223 (28.70%), Postives = 105/223 (47.09%), Query Frame = 3
Query:   66 KQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            + LVL+ +  AC  WGFFQV+NH    EL  ++E+  KE + +  E+K K   D V   G    E   N  DW+  F    +  + +   P+ DD+               +R+L +++A ++E+                   L+  F      T   + + YPPCP P+L  G+  H D G + +L QDD V GLQ+ K  +G W+ V P+  + ++++G+
Sbjct:   23 RSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQKFK---DMVQTKGLVSAESQVNDIDWESTFYLRHRPTSNISEVPDLDDQ---------------YRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DGHWVDVPPMKHSIVVNLGD 225          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.480e-19
Identity = 70/242 (28.93%), Postives = 101/242 (41.74%), Query Frame = 3
Query:   36 IPVIDL-------STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIE-EKQKVKRDEVHPMGY--HDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTF----LRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            IP IDL       +   K  +  +  A  KWGFFQVINHG   EL  +++   ++F +QP E  K    RD      Y  +   +T    +W++ F  ++      P  PEP D                  E+C D   E  K                      + K+        +  +Y+PPCP P+L  G   H DG  LTVL  D++ GLQ+ ++  G W  V  +P A II+IG+
Sbjct:   64 IPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTFYCYMA-----PDPPEPQD----------------LPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCRE--GYWFDVPHVPGALIINIGD 282          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.852e-19
Identity = 70/238 (29.41%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   30 DEIPVID---LSTDPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  PVID   L+ + +   +E +  AC+ WGFF+++NHG   EL   +E+  KE +++ +E++ K   + V   G    +   N  DW+  F        FL   P  +  E+       P+     R+  +++A ++EK                   L+  F   K  T   + + YPPCP PEL  G+  H D G + +L QD+ V GLQ+ K  +GEWI V P+  + +I+IG+
Sbjct:    2 EAFPVIDMEKLNGEERAPTMEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFK---EMVATKGLEAVQSEINDLDWESTF--------FLRHLPVSNISEI-------PDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLK--DGEWIDVPPMKHSIVINIGD 219          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.643e-19
Identity = 67/238 (28.15%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   30 DEIPVIDLS----TDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  P+I+L        K  + ++  AC+ WGFF++++HG P+E    +E+  KE + Q +E++ K   + V   G    +   N  DW+  F        +L   P+ +  E+  L +Q       +R + +++A ++EK                   L+  F      T   + + YPPCP PEL  G+  H D G L +L QDD V GLQ+ K  +G+WI V P+  + +I++G+
Sbjct:    2 ENFPIINLEGLNGEGRKATMEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFK---ELVASKGLEAVKTEVNDMDWESTF--------YLRHLPKSNISEVPDLEDQ-------YRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLK--DGQWIDVPPMRHSIVINLGD 219          
The following BLAST results are available for this feature:
BLAST of DY259789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
ACCO1_ARATH4.052e-2028.571-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
GAOX3_ARATH6.912e-2028.40Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
ACCO1_CUCME6.912e-2028.511-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCH3_ARATH1.540e-1928.991-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G3O23_WHEAT2.627e-1928.87Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
ACCO3_CUCME2.627e-1929.341-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO_DIACA4.480e-1928.70Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCH2_ARATH4.480e-1928.931-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO_ACTDE5.852e-1929.411-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO_PRUMU7.643e-1928.151-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YD05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259789 ID=DY259789; Name=DY259789; organism=Citrus clementina; type=EST; length=915bp
CAAAGGTTCAAAACATTATGGAAATAGATGATGAAATCCCAGTTATTGAT
CTCTCTACCGACCCCAAACAACTTGTCTTGGAAGTTGGCCATGCATGTCA
AAAGTGGGGATTTTTTCAAGTCATCAATCATGGGGCGCCATCAGAATTAA
AGGCCAGGATTGAAAAGGCAGCAAAAGAATTCTTTGATCAACCAATAGAG
GAGAAGCAGAAAGTGAAAAGAGATGAAGTTCATCCTATGGGATATCATGA
CCAGGAGCATACCAAGAATGTTAGGGACTGGAAGGAAGTGTTTGATTTTT
GGTTGCAAGATCCAACTTTTCTCCCAGCTTCTCCTGAGCCTGATGATAAG
GAGCTGAGGAGGCTCACTAACCAATGGCCTGAGTACCCTCTTGGATTTAG
GGAGTTATGTGAGGATTATGCTAGGGAGGTGGAAAAGCTAGCTTACAAGT
TACTGGAACTTATCTCCCTCAGCTTAGGCTTATCTGCTGATCGGTTGCAA
GGCTATTTTAAAGAACAAACAACCTTTCTGCGATTCAACTACTATCCTCC
TTGCCCTTATCCTGAGCTAGCTCTGGGCGTCGGTCCACACAAAGATGGAG
GTGCCTTAACGGTACTTGCTCAAGATGACGTTGGTGGACTTCAAATAAAG
AAGAAATCAAATGGAGAGTGGATTCCTGTTTAACCAATCCCAGATGCCTA
TATTATTAGCATTGGTGAAGCCCCCCCAGTTTGGAACCAATGATAATTAT
GAAAGTCCAAACCCCAAAGTGGTGGGTCAACCCTAAAAAAGGAAAGTTTT
TCGATTCCATTTCTTTCTTCTACCCGCCCAACAACTCATGATGTAAGCTT
TGTAATAAATTTGAAAAAAAGCCAACTCCCGCCAGGGAACGGCAATCTCG
GCGGGGCAAACTCCG
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