DY259795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: RPGRH_CAEEL (X-linked retinitis pigmentosa GTPase regulator homolog OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.523e-12 Identity = 51/180 (28.33%), Postives = 84/180 (46.67%), Query Frame = 3 Query: 294 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHG--NSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAVAEKENSMDGG 827 I+ GA H + L S + +WG GQ G G + + Q+ D I + CG H+ A+ S ++++GWG +G+LGHG N+S+ P + L +V QIACG +H + +T G V G GQ+G+ + + ++ +A HS+ + E + G Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG-DWPAIEKIACGQFHS-AFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGL-ICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWG 957 HSP 2 Score: 70.0922 bits (170), Expect = 2.135e-11 Identity = 35/97 (36.08%), Postives = 60/97 (61.86%), Query Frame = 3 Query: 285 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLG-----HGNSSDL 560 ++ ++ G SHS + S + +WG+G D QLGHG+ +R+ P Q+ +G + V+V+ G +HT A ++ V++WG DFG+ G +GNS+D+ Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDD-GSVFAWGKNDFGQCGVLTKKNGNSADV 1119
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: RCCDA_DICDI (RCC1 domain-containing protein DDB_G0279253 OS=Dictyostelium discoideum GN=DDB_G0279253 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.523e-12 Identity = 58/205 (28.29%), Postives = 93/205 (45.37%), Query Frame = 3 Query: 285 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGH----------------GDAEDRL---SPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPI------------KALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLG----LGTTEDSLVPQKL---QAFEEVSIKMVAAGAEH 785 ++ +S G HS+AL S N V WG + GQL + D D + SP ++ + +I+ ++CG HT + V S+G FG+LG+GN D P I K+L+ +++K+I CG S+ +T + ++ GR + G LG L + KL ++F E IK + G+EH Sbjct: 233 IVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNNNINDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSNPCVIDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICGRGEYGILGDNRDLSLDNSNSNQFKLLNSESFNENKIKNFSIGSEH 437
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: SRGEF_MOUSE (Secretion-regulating guanine nucleotide exchange factor OS=Mus musculus GN=Sergef PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.620e-12 Identity = 52/168 (30.95%), Postives = 80/168 (47.62%), Query Frame = 3 Query: 339 IVCSWGRGEDGQLGHGDAEDRLSPTQLSAL-DGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGL-GTTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAVAEKENSMDGGGAL 836 ++ +WG GQLG G ED P QLS I SVT G H+ ++ ++ G G+LG G++ ++ K L ++Q+ACG + +T +G+V S G N GQLG+ +VPQ ++ E + VAAG H++A + G L Sbjct: 16 VLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGG-DLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLRE-KVVCVAAGLRHALATTATGSVFQWGTGL 181
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: SRGEF_BOVIN (Secretion-regulating guanine nucleotide exchange factor OS=Bos taurus GN=SERGEF PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.586e-12 Identity = 51/176 (28.98%), Postives = 83/176 (47.16%), Query Frame = 3 Query: 315 SVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVS-VTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGL-GTTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAVAEKENSMDGGGAL 836 S A+ + + +WG GQLG G ED LS QLS + +T G H+ ++ ++ G G+LG G++ ++ P K+L ++Q+ACG + +T G+V S G N GQLG+ ++PQ ++ E + +AAG H++A G L Sbjct: 8 SEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEG-SLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLRE-KVVSIAAGLRHALAATASGTVFQWGTGL 181
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: RCCD1_MOUSE (RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2) HSP 1 Score: 64.3142 bits (155), Expect = 1.176e-11 Identity = 37/115 (32.17%), Postives = 62/115 (53.91%), Query Frame = 3 Query: 459 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAVAE 803 GA+H + QV+SWG G G+LGHG P ++AL LR+ ++A G H + ++ G++ WG N++GQL L T + + +A E + ++ G + +AVA+ Sbjct: 169 GAEHVLLLC-AAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGT----ENKAEREEATELNEDGLKEELAVAD 278 HSP 2 Score: 26.5646 bits (57), Expect = 1.176e-11 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 2 Query: 800 RKGKLHGWGRGPYGNLG 850 R G+L+ WG G YG LG Sbjct: 318 RTGELYTWGWGKYGQLG 334 The following BLAST results are available for this feature:
BLAST of DY259795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259795 ID=DY259795; Name=DY259795; organism=Citrus clementina; type=EST; length=953bpback to top |