DY259883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259883 vs. ExPASy Swiss-Prot
Match: CH603_SINMW (60 kDa chaperonin 3 OS=Sinorhizobium medicae (strain WSM419) GN=groL3 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.599e-15 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 252 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDP 566 D ++G +A+DA+V L S A+ I+ +IA GT +ANGD IG +A+A EK + + + KT + EL++ GM DRGYLSPYF+TN L DP Sbjct: 115 DLKRGIDLAVDAVVKELKSNARKISQNSEIAQVGTISANGDTEIGRYLAEAMEKVGNEGVITVEEAKTSDT-ELEVVEGMQFDRGYLSPYFVTNQDKMRVELEDP 218 HSP 2 Score: 23.8682 bits (50), Expect = 1.599e-15 Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 541 RKNVFYEIPYIMILEKKVSN 600 + V E PYI+I EKK+SN Sbjct: 210 KMRVELEDPYILIHEKKLSN 229
BLAST of DY259883 vs. ExPASy Swiss-Prot
Match: CH605_RHIME (60 kDa chaperonin 5 OS=Rhizobium meliloti GN=groL5 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.700e-15 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 252 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDP 566 D ++G +A+DA+V L + A+ I+ +IA GT +ANGD IG +A+A EK + + + KT + EL++ GM DRGYLSPYFITN L DP Sbjct: 115 DLKRGIDLAVDAVVKELKNNARKISKNSEIAQVGTISANGDTEIGRYLAEAMEKVGNEGVITVEEAKTAET-ELEVVEGMQFDRGYLSPYFITNQDKMRVELEDP 218 HSP 2 Score: 23.8682 bits (50), Expect = 2.700e-15 Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 541 RKNVFYEIPYIMILEKKVSN 600 + V E PYI+I EKK+SN Sbjct: 210 KMRVELEDPYILIHEKKLSN 229
BLAST of DY259883 vs. ExPASy Swiss-Prot
Match: CH603_BRASB (60 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL3 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.559e-15 Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 252 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDP 566 D ++G +A+DA+V +L + A+ ITS ++IA GT +ANGD IG +A+A +K GN + + EL++ GM DRGY+SPYF+TN + L DP Sbjct: 115 DLKRGIDLAVDAIVADLKAHAKKITSNDEIAQVGTISANGDNEIGRFLAEAMQK-VGNEGVITVEEAKSLDTELEVVEGMQFDRGYVSPYFVTNSEKMRVELEDP 218 HSP 2 Score: 21.557 bits (44), Expect = 4.559e-15 Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 1 Query: 541 RKNVFYEIPYIMILEKKVS 597 + V E PYI+I EKK+S Sbjct: 210 KMRVELEDPYILIHEKKLS 228
BLAST of DY259883 vs. ExPASy Swiss-Prot
Match: CH602_RHILE (60 kDa chaperonin 2 OS=Rhizobium leguminosarum GN=groL2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 9.999e-15 Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 252 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDP 566 D ++G +A+ A+V L + A+ I++ +IA GT +ANGD IG +A+A EK + + + + KT + EL++ GM DRGYLSPYF+TN DP Sbjct: 115 DLKRGIDLAVAAIVAELKANARKISNNSEIAQVGTISANGDAEIGRFLAEAMEKVGNDGVITVEEAKTAET-ELEVVEGMQFDRGYLSPYFVTNADKMRVEFEDP 218 HSP 2 Score: 25.409 bits (54), Expect = 9.999e-15 Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 541 RKNVFYEIPYIMILEKKVSN 600 + V +E PYI+I EKK+SN Sbjct: 210 KMRVEFEDPYILIHEKKLSN 229
BLAST of DY259883 vs. ExPASy Swiss-Prot
Match: CH60_CHRSD (60 kDa chaperonin OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=groL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.687e-14 Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 252 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDP 566 D ++G A+DA V + S + P T + IA GT +ANGD+ IGE+IA A +K G + D EL++ GM DRGYLSPYF+TN T L DP Sbjct: 115 DLKRGIDQAVDAAVKEIQSLSVPCTDAKAIAQVGTISANGDKRIGEIIADAMQK-VGKEGVITVDEGRGFEDELEVVEGMQFDRGYLSPYFVTNQDTMMVELEDP 218 HSP 2 Score: 22.7126 bits (47), Expect = 1.687e-14 Identity = 7/14 (50.00%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 559 EIPYIMILEKKVSN 600 E PY+++++KK+SN Sbjct: 216 EDPYLLMVDKKISN 229
BLAST of DY259883 vs. ExPASy Swiss-Prot
Match: CH602_RHISN (60 kDa chaperonin 2 OS=Rhizobium sp. (strain NGR234) GN=groL2 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.688e-14 Identity = 42/105 (40.00%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 252 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDP 566 D ++G A+DA+V L A+ +T ++IA GT +ANGD IG +A+A EK + + + KT + EL++ GM DRGYLSPYF+TN L +P Sbjct: 115 DLKRGVDKAVDAVVEELRRNARKVTKNDEIAQVGTISANGDTEIGRFLAEAMEKVGNEGVITVEEAKTAVT-ELEVVEGMQFDRGYLSPYFVTNPDKMRVELEEP 218 HSP 2 Score: 23.483 bits (49), Expect = 1.688e-14 Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 541 RKNVFYEIPYIMILEKKVSN 600 + V E PY++I EKK+SN Sbjct: 210 KMRVELEEPYVLIHEKKLSN 229
BLAST of DY259883 vs. ExPASy Swiss-Prot
Match: CH603_RHIL3 (60 kDa chaperonin 3 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=groL3 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.688e-14 Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 252 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDP 566 D ++G +A+ A+V L + A+ I++ +IA GT +ANGD IG +A+A E+ + + + + KT + EL++ GM DRGYLSPYF+TN DP Sbjct: 115 DLKRGIDLAVGAIVAELKANARKISNNSEIAQVGTISANGDAEIGRFLAEAMERVGNDGVITVEEAKTAET-ELEVVEGMQFDRGYLSPYFVTNADKMRVEFEDP 218 HSP 2 Score: 25.409 bits (54), Expect = 1.688e-14 Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 541 RKNVFYEIPYIMILEKKVSN 600 + V +E PYI+I EKK+SN Sbjct: 210 KMRVEFEDPYILIHEKKLSN 229
BLAST of DY259883 vs. ExPASy Swiss-Prot
Match: CH60_CAUSK (60 kDa chaperonin OS=Caulobacter sp. (strain K31) GN=groL PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14 Identity = 42/106 (39.62%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 252 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPL 569 D ++G A+ +V ++ ++++ +T+ +IA GT +ANGD+ +GE+IAKA +K + + + KT + EL + GM DRGYLSPYFITN E L +PL Sbjct: 115 DLKRGIDKAVHVVVDSIKASSKKVTTNNEIAQVGTISANGDKDVGEMIAKAMDKVGNEGVITVEEAKTAET-ELDVVEGMQFDRGYLSPYFITNADKMEVQLEEPL 219
BLAST of DY259883 vs. ExPASy Swiss-Prot
Match: CH603_RHILE (60 kDa chaperonin 3 OS=Rhizobium leguminosarum GN=groL3 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14 Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 252 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDP 566 D R+G + + A+V + + A + S +IA GT AANGD IGE+IAKA +K GN + + EL + GM DRGYLSPYF+TN + L DP Sbjct: 115 DLRRGIDLGVTAVVKEIKARAMKVKSSSEIAQVGTIAANGDAAIGEMIAKAMDK-VGNEGVITVEEARTAETELDVVEGMQFDRGYLSPYFVTNAEKMRVELEDP 218
BLAST of DY259883 vs. ExPASy Swiss-Prot
Match: CH603_RHIEC (60 kDa chaperonin 3 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL3 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.587e-14 Identity = 43/105 (40.95%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 252 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDP 566 D R+G + + A+V + + A+ + S +IA G AANGD +GE+IAKA EK GN + + EL + GM DRGYLSPYF+TN + L DP Sbjct: 115 DLRRGIDLGVSAIVKEIQARARKVKSSGEIAQVGAIAANGDATVGEMIAKAMEK-VGNEGVITVEEARTAETELDVVEGMQFDRGYLSPYFVTNAEKMRVELEDP 218 The following BLAST results are available for this feature:
BLAST of DY259883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 296
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259883 ID=DY259883; Name=DY259883; organism=Citrus clementina; type=EST; length=929bpback to top |