DY259888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259888 vs. ExPASy Swiss-Prot
Match: ERG24_ASCIM (Delta(14)-sterol reductase OS=Ascobolus immersus GN=ERG3 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.866e-13 Identity = 50/174 (28.74%), Postives = 81/174 (46.55%), Query Frame = 3 Query: 300 IACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVAAYAVTLITYLSL--------WWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSS------TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVPYCIKQYEANAKVEDSMLV 779 +A + AL +LP + EG + G R Y+ N + V T+L WWF + + D+ ++ SA I S+ +++YI+ + + G GN I DF+ G EL PRIG+ DIK R G+M W + + + +KQY + V DS+++ Sbjct: 69 VAAYYLLLVALMYVLPAEIAEGVVLKDGSRLKYRCNAFTTFLV-FFTFLGTMTVLEGPTWWFWSY----LTDNFAQLQSASIVFSYAMSLWVYIRSYRPMPKGKEVILSPVGFKGNHIHDFWMGRELNPRIGEWLDIKQLHELRPGLMGWILFNLAWTVKQYNTHGFVSDSIVL 237
BLAST of DY259888 vs. ExPASy Swiss-Prot
Match: ERG24_NEUCR (Delta(14)-sterol reductase OS=Neurospora crassa GN=erg-3 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.342e-12 Identity = 66/205 (32.20%), Postives = 89/205 (43.41%), Query Frame = 3 Query: 240 NGLQGFIDIWPRPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVAAYAVTLI-----TYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGH-LAPSSTD------SGSCGNIIIDFYWGMELYPRIGK----NFDIKVFTNCRFGMMSWAVLAVPYCIKQYEANAKVEDSMLVNTKLMRNYV 806 NG+ G W +A W L + A LPG VEG TG R YK N + TL T F ++ T + D+ +I SA I +F IF+Y++ + P + D G G++I DFY G EL PRI DIK F R G++ W +L + KQY V DS+L T + YV Sbjct: 78 NGVFGLFS-W---SATLWTL--GYYALSLVQYRFLPGHHVEGTELSTGGRLKYKLNAFNSAMCTLAILAAGTIAQGAEFPVW--TFISDNFAQIISANILFAFALAIFVYVRSFDVKPGNKDMRQLAAGGVTGSLIYDFYIGRELNPRITLPLIGQVDIKEFMEMRPGLLGWIILNCAFIAKQYRLYGYVTDSILFITAIQAFYV 274
BLAST of DY259888 vs. ExPASy Swiss-Prot
Match: ERG24_SCHPO (Delta(14)-sterol reductase OS=Schizosaccharomyces pombe GN=erg24 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.659e-12 Identity = 46/148 (31.08%), Postives = 73/148 (49.32%), Query Frame = 3 Query: 348 GKRVEG-PISPTGHRPVYKANGVAAYAVTL-ITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSS-TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVPYCIKQY-EANAKVEDSMLV 779 GK +G PI G R +YK NG + + L + S++ G ++D+ ++ A S + C F Y++ G+ GNI+ D++ G L PRIG NFDIK F R G++ W V + + QY ++ DSM++ Sbjct: 85 GKWAKGTPIDDKGTRLLYKINGFNSACLILGVVCTSIYLLGASCMEFIWDNFLQLMFAAYVFSVVLCTFCYVQSFFGKQQLAKGGTSGNILFDWFIGRSLNPRIG-NFDIKCFCELRPGLILWVVFDIAFACHQYLVLGGRITDSMVL 231
BLAST of DY259888 vs. ExPASy Swiss-Prot
Match: LBR_RAT (Lamin-B receptor OS=Rattus norvegicus GN=Lbr PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.637e-11 Identity = 49/177 (27.68%), Postives = 82/177 (46.33%), Query Frame = 3 Query: 321 EAALQLLLPGKRVEGPISPTGHRPVYKANGVAAYAVT--LITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDS-GSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVPYCIKQYEANAKVEDSMLVNTKLMRNYVTKFFLGGNWFRD 842 +A LL GK VEG G R Y+ NG+ A+ +T + W ++ +Y H + A I S + ++LY + P S S GN + DF+ G EL PRIG FD+K F R G++ W V+ + + + + + S+ + L+ ++ + + WF + Sbjct: 274 QALFSLLPVGKVVEGTPLVDGRRLKYRLNGLYAFILTSAAVGTAVFWDIELY---YLYTHFLQFALAAIVFSVVLSVYLYARSLKVPRDELSPASSGNAVYDFFIGRELNPRIGA-FDLKFFCELRPGLIGWVVINLVMLLAEMKVQERSAPSLAMT--LVNSFQLLYVVDALWFEE 444
BLAST of DY259888 vs. ExPASy Swiss-Prot
Match: LBR_CHICK (Lamin-B receptor OS=Gallus gallus GN=LBR PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.637e-11 Identity = 46/135 (34.07%), Postives = 67/135 (49.63%), Query Frame = 3 Query: 318 FEAALQLLLPGKRVEGPISPTGHRPVYKANGVAAYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSS--TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVL 716 F+A LL GK VEG + Y+ NG A+ +T +L +F F +YDH + + S I+LYI+ AP G+ G ++ DF+ G EL PRIG +FD+K F R G++ W V+ Sbjct: 260 FQALFYLLPIGKVVEGLPLSNPRKLQYRINGFYAFLLTAAAIGTLLYFQ-FELHYLYDHFVQFAVSAAAFSMALSIYLYIRSLKAPEEDLAPGGNSGYLVYDFFTGHELNPRIG-SFDLKYFCELRPGLIGWVVI 392
BLAST of DY259888 vs. ExPASy Swiss-Prot
Match: ERG24_BOVIN (Delta(14)-sterol reductase OS=Bos taurus GN=TM7SF2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.615e-11 Identity = 58/173 (33.53%), Postives = 82/173 (47.40%), Query Frame = 3 Query: 291 WKLIACFG--AFEAALQLLLPGKRVEGPISPTGHRPVYKANGVAAYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGS----FIFCIFLYIKGHLAPSST--DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVPYCIKQYEANAKVEDSM-LVN 782 W L+ C +AAL LL K EG R Y NG A +T + L G+ + + L E+ L F + FIF + LY+K LAP+S G+ GN+I DF+ G EL PRI +FD K F R G++ W ++ + I++ E +M LVN Sbjct: 61 WALLLCLTWLGLQAALYLLPARKVAEGQELKDKSRLRYPTNGFQALVLTAL----LVGLGV-SAGLPLSALPEMLLPLAFAATLTAFIFSLLLYLKALLAPASALAPGGNSGNLIYDFFLGRELNPRI-CSFDFKYFCELRPGLIGWVLINLALLIQEAELRGSPSLAMWLVN 227 The following BLAST results are available for this feature:
BLAST of DY259888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259888 ID=DY259888; Name=DY259888; organism=Citrus clementina; type=EST; length=1071bpback to top |