DY259889

Overview
NameDY259889
Unique NameDY259889
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length973
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259889 vs. ExPASy Swiss-Prot
Match: CMTD1_MOUSE (Catechol-O-methyltransferase domain-containing protein 1 OS=Mus musculus GN=Comtd1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.421e-26
Identity = 66/169 (39.05%), Postives = 102/169 (60.36%), Query Frame = 3
Query:   57 QSEKLYEYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFLFVDADKNNYINYHKRLIELVKVGGVIGYDNTLW 563
            +   L++Y+L  S+  RE   L+ +R LT + P    M   ++AQ L+ L +LI AK  +++G FTGYS LA ALA+P+ G+++  ++  E  + G P+ ++A V  KID R  PAL  LD+L+   +  GTFD   VDADK N   Y++R ++L++ GGV+     LW
Sbjct:   50 EDNPLWQYLLSRSM--REHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIKAKKALDLGTFTGYSALALALALPEAGRVVTCEVDAEPPKLGRPMWKQAEVEQKIDLRLQPALQTLDELLAAGE-AGTFDIAVVDADKENCTAYYERCLQLLRPGGVLAVLRVLW 215          
BLAST of DY259889 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.676e-25
Identity = 57/151 (37.75%), Postives = 97/151 (64.24%), Query Frame = 3
Query:  108 EPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFLFVDADKNNYINYHKRLIELVKVGGVIGYDNTL 560
            + + ++  +E  ++H    M+T  ++  F  +L++++NAK T++IGVFTG S L  ALA+ D+G+++A D++ E+ +  L    KAGV HKI+ +  PA   L +LI D+    T+DF+F+DADK  Y  Y++  ++L++ GG+I  DN L
Sbjct:   35 QKELIQFTKENIERH---IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVL 181          
BLAST of DY259889 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.962e-25
Identity = 56/151 (37.09%), Postives = 97/151 (64.24%), Query Frame = 3
Query:  108 EPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFLFVDADKNNYINYHKRLIELVKVGGVIGYDNTL 560
            + + ++  +E  ++H    M+T  ++  F  +L++++NAK T++IGVFTG S L  ALA+ D+G+++A D++ ++ +  L    KAGV HKI+ +  PA   L +LI D+    T+DF+F+DADK  Y  Y++  ++L++ GG+I  DN L
Sbjct:   34 QKELIQFTKENIERH---IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVL 180          
The following BLAST results are available for this feature:
BLAST of DY259889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CMTD1_MOUSE2.421e-2639.05Catechol-O-methyltransferase domain-containing pro... [more]
CAMT2_DICDI2.676e-2537.75Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI5.962e-2537.09Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YI13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259889 ID=DY259889; Name=DY259889; organism=Citrus clementina; type=EST; length=973bp
AGGAGGAAATTAAGGATCGTTACTACAAAACTCTACATGGGAACAAGACC
CTTTTACAGAGTGAAAAACTTTATGAGTATATACTTGAAACCAGTGTATA
TCCAAGAGAACCACAATGCTTGAAGGAGATCCGCGAGTTGACGGACAAGC
ATCCATGGAGCGCCATGATGACTGCACCTGATGAAGCACAATTTTTGAGC
ATGCTACTCAAGCTTATCAATGCCAAGAATACCATGGAAATTGGCGTTTT
CACTGGTTACTCTCTCCTAGCCACTGCCCTCGCCATTCCCGACGATGGCA
AGATACTGGCCCTGGACATCACCAAGGAACACTACGAGAAGGGTCTCCCT
ATAATTCAAAAAGCTGGTGTTGCCCACAAGATTGATTTCAGAGAAGGCCC
TGCTCTTCCTCTTCTTGATCAATTGATCCAAGACGAAAAATATCATGGGA
CATTCGACTTCCTCTTTGTTGATGCTGACAAGAATAACTACATTAATTAC
CACAAGAGGCTTATTGAGCTTGTGAAGGTTGGGGGAGTGATTGGCTACGA
CAACACCTTGTGGGGGTGGATCTGTGGTGGCCCAACCTGACGCCCACCCG
GATGACCTCATCTCACGCCGGAGGGATTCTGTGCCAGAACTCACCAAGGC
CCGGGAGTTCGCCCACGGATCACAATTAGCCTCCCCTCCCCTGCTCGAGG
GGTTACTTTATACTCCTCCCACCCCTCGCCCCCCATCACCTCTCCACCCA
CCGCACGGGCACGCTCTATATTCTTTCGCTTTCACACGCACCCCTCCATC
AAGACAAAATCTCTCATCTCACCATGTCTGATGACCGTCCTGCGCCACCA
TCTAAACACCCCCCTTTCCGTACACTCCACCTCTACCACCGCCTCCCCCG
CTCCACACCCAAGCCTCCTCCCCCACATCCATCGCTACTACCAACCGCTC
CCCCCCCCAATCACAGACCCCCC
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