DY259904

Overview
NameDY259904
Unique NameDY259904
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length923
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.817e-21
Identity = 77/262 (29.39%), Postives = 123/262 (46.95%), Query Frame = 3
Query:   81 PVISLENING--AERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEG------IQTEVNDMDWES--TFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHP 830
            P+ISLE I+    +RA I +KI +ACE+WG F++V+HG++ E +  +    K  +    E++ +  ++     G      +Q EV   DW    T++         +  PD  E +  V                             L K     +       V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  KD    WI V P+  + VVNLGD    +++G+ ++ + + +  ++   R+S+A+F +P
Sbjct:   42 PIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEVVQ-DWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVV---VNFYPKCPEPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNP 297          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.817e-21
Identity = 77/273 (28.21%), Postives = 124/273 (45.42%), Query Frame = 3
Query:   57 EFRDMENFPVISLENINGAE--RAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFK---------ELVASRALEGIQTEVNDMDWES--TFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD--GQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHP 830
            EF D    PVISL  I+  +  R  I  +I EACENWG F++V+HG++   +  + RL +  +    E++ +           + S  L+G   +    DW    T++   +     +  PD  + + KV                             L       +       V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD    +++G+ ++ + + +  ++   R+S+A+F +P
Sbjct:   32 EFSD--EIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEAVQ----DWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIV---VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNP 293          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.217e-21
Identity = 80/263 (30.42%), Postives = 128/263 (48.67%), Query Frame = 3
Query:   81 PVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVA----SRALEG----IQTEVNDMD-WESTFYVRHLPQSTINEV--PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGP--TFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHP 830
            PVI L +   ++   I+  ++EA + WG F++VNHGI  E +  ++ + K  +   + Q  KEL+A    S+++EG    +Q EV+    W    + +  P S IN    P     YR+                               K    GA G    +  K++ YPPCP+PDL  G+ AHTD   I +L  ++ V GLQ+ KDG W D   + ++++V++GDQ+E++++GK +SV  R     + + RMS   F  P
Sbjct:   44 PVIDLSD---SDEKKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFE--LPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSFKD---GAGGDDLVYLMKINYYPPCPRPDLALGV-AHTDMSAITVLVPNE-VPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKE-KTRMSWPVFLEP 295          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.217e-21
Identity = 75/268 (27.99%), Postives = 121/268 (45.15%), Query Frame = 3
Query:   72 ENFPVISLENINGAE--RAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFK---------ELVASRALEGIQTEVNDMDWES--TFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHP 830
            +  PVISL  I+  +  R  I  +I EACENWG F++V+HG++   +  + RL +  +    E + +           + S  L+G   +    DW    T++   +     +  PD  E + KV                             L       +       V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD    +++G+ ++ + + +  ++   R+S+A+F +P
Sbjct:   36 DEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSSHLQGEAVQ----DWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIV---VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNP 294          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.402e-20
Identity = 71/264 (26.89%), Postives = 117/264 (44.32%), Query Frame = 3
Query:   81 PVISLENING---AERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEV-----NDMDWES--TFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHPGK 836
            P+ISL  ++      R  I  KI +ACE+WG F++V+HGI+   +  + RL++  +    E++ +         G          + MDW    T++   +     +  P   E +R                             G L K             ++ YP CP+PDL  G+R HTD G I +L Q D V GLQ  +DG   WI V P+  + VVNLGD    +++G+ ++ + + +  +    R+S+A+F +P +
Sbjct:   39 PIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVL---INYYPTCPQPDLTLGVRRHTDPGTITILLQ-DMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNST-SSRLSIATFQNPAQ 297          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.391e-20
Identity = 69/258 (26.74%), Postives = 118/258 (45.74%), Query Frame = 3
Query:   81 PVISLENINGAERAAI-LEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEG-----IQTEVNDMDWESTFYVRHLP--QSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHP 830
            PVI L  +   + A   L K + AC +WGFF+L+NHG+  E ++ ++  T+  +R   +++         +EG     + +E   +DW    ++   P  +  +   P     +R+ M                            L K         F  +    P         GL  H+DA G+ LL Q ++V+GL + KD +W+ + P+  + VVN+GD IE++++G  +S+E R +  TD E R+S+A+FH P
Sbjct:   52 PVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLR----TVFNREDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKE-RLSIAAFHDP 304          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.326e-20
Identity = 74/261 (28.35%), Postives = 122/261 (46.74%), Query Frame = 3
Query:   81 PVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVA----SRALEGIQTEVNDMDWESTFYVRHL-----PQSTINEV--PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHP 830
            P I + +++  +  ++   + +A E WG F++VNHGI  E +  ++ + +  +   +    KE VA    S+ +EG  T++         +V HL     P S +N    P    EYR+V                             LK+   G     +  K++ YPPCP+PDL  G+ AHTD  GI LL  ++ V GLQ+ KD  W D   +  +++V++GDQI  +++G+ ++V  R     + + RMS   F  P
Sbjct:   41 PAIPVVDLSDPDEESVRRAVVKASEEWGLFQVVNHGIPTELIRRLQDVGRKFFE--LPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGL-GGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNE-VPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKE-KTRMSWPVFLEP 296          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.024e-19
Identity = 71/273 (26.01%), Postives = 125/273 (45.79%), Query Frame = 3
Query:   48 LKKEFRDMENFPVISL---ENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMD--------WESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHPG 833
            L  +   ++  P I L   +  +  +R   +E+I EA   WGFF+++NHG+  E ++ +++  +  + +  E R KE   SR        +++ D        W  TF     P +   +  DL E  R +M                           +L  +   + G    +    YPPCP+PDL  G   H+D   + +L  D ++ GLQ+ ++G W DVP +  ++++N+GD +++IT+ K  S+E RV++      R+S+A F   G
Sbjct:   54 LPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVR-KEFY-SRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAPDTP--KPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDM-DCSKGLLMLSHY--YPPCPEPDLTLGTSQHSDNSFLTVLLPD-QIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTG 318          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.643e-19
Identity = 67/275 (24.36%), Postives = 128/275 (46.55%), Query Frame = 3
Query:   48 LKKEFRDMENFPVISLENINGAE---RAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKEL--VASRALEGIQTEV-----NDMDWESTFYVRHLPQST--INEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHPGK 836
            L+++  D    P I L+NI   +   R   +E++ +A  +WG   L+NHGI  + M+ V++  +  +   +E++ K     A+  ++G  +++       ++WE  F+    P+    ++  P    +Y +                              L+K   G        K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  +G+W+    +  SIV+++GD +E++++GK +S+  R +   + + R+S A F  P K
Sbjct:   37 LEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPK 309          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.643e-19
Identity = 65/239 (27.20%), Postives = 107/239 (44.77%), Query Frame = 3
Query:  129 LEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDM------DWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHH 827
            +E I EA   WGFF+++NHG+  E ++ ++   +  + +  E R          + I     D+      +W  TFY    P     E  DL E  R VM                           +LK +     G         +PPCP+PDL  G   H+D G  + +   D + GLQ+ ++G W DVP +  ++++N+GD +++IT+ K  S++ RV++      R+S+A F H
Sbjct:   84 IEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAPDPP--EPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDM-ECLKG--LRMLCHYFPPCPEPDLTFGTSKHSD-GSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFH 316          
The following BLAST results are available for this feature:
BLAST of DY259904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
FL3H_PETHY4.817e-2129.39Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_MATIN4.817e-2128.21Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FLS_EUSGR8.217e-2130.42Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FL3H_ARATH8.217e-2127.99Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FNSI_PETCR1.402e-2026.89Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
NCS1_COPJA2.391e-2026.74S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
FLS1_ARATH5.326e-2028.35Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
ACCH3_ARATH2.024e-1926.011-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
LDOX_ARATH2.643e-1924.36Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
ACCH2_ARATH2.643e-1927.201-aminocyclopropane-1-carboxylate oxidase homolog ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259904 ID=DY259904; Name=DY259904; organism=Citrus clementina; type=EST; length=923bp
CTCACAAACACATACACAAACACAAACACTCACAAACACACAGCTTGTTA
AAGAAAGAATTCAGAGATATGGAGAACTTCCCCGTTATCAGCTTGGAGAA
CATCAATGGTGCTGAAAGAGCGGCTATCTTGGAGAAGATCAACGAGGCCT
GTGAGAACTGGGGCTTCTTTGAGCTGGTGAATCATGGAATTGAGCCGGAG
TTTATGGACACAGTGGAGAGATTGACCAAGGCGCATTACAGAAAATGTAT
GGAGCAAAGATTCAAGGAGCTTGTTGCAAGCAGGGCACTTGAAGGTATCC
AAACCGAGGTCAATGACATGGACTGGGAAAGCACTTTCTATGTGCGTCAC
CTCCCTCAGTCGACCATCAATGAAGTCCCAGATCTTGATGAGGAATACAG
GAAGGTGATGAAGGAATTTGCATTGAAATTGGAGAAATTAGCAGAGGAGC
TATTGGACTTGTTATGCGAGAATCTTGGATTAGAGAAGGGGTACTTGAAA
AAGGTCTTTCATGGGGCAAACGGACCAACCTTTGGTACCAAAGTTAGCAA
CTACCCACCATGCCCCAAGCCAGATTTGATCAAGGGTCTCCGGGCTCACA
CCGACGCCGGCGGCATCATCTTGCTCTTCCAGGATGACAAAGTCAGTGGC
CTTCAGCTTCTTAAAGATGGCCAGTGGATTGATGTGCCCCCCTTGCGCCA
CTCCATTGTTGTCAACCTCGGTGACCAAATTGAGGTGATCACCCATGGAA
AGTTACAGAGTGTGGAGCCCAGAGTGATTTCCCAAACCGACGGCGAGGGC
CGGATGTCCCTAGCTTCCTTTCACCATCCCGGGAAGTGATGCCGTGATCT
ATCCCGCACCCCGCATTGCCTGAAAAAGAAGCCGAAAAGAAACAAGTGTA
CCCAAAATTTGTTTTTGGGGACC
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