DY259908

Overview
NameDY259908
Unique NameDY259908
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1090
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259908 vs. ExPASy Swiss-Prot
Match: NAMA_BACC2 (NADPH dehydrogenase OS=Bacillus cereus (strain G9842) GN=namA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.680e-12
Identity = 55/190 (28.95%), Postives = 86/190 (45.26%), Query Frame = 1
Query:   97 DSRLFTPYNMGKFNLSHRVVLAPMTRCRALNG---IPGPALATYYQQRSTPGGFLISEGTAVSPTAPGFPHVPGIYTEEQVEAWKKVVDAVHAKGAIIFCQLWHVGRASHQVYQPGGAAPISSTNEPISRRWRILMPDGSYATYPNPQALQTSEIPEVIDQYRQAALNAIPAGFDGIEIPGAHGYLIDQF 657
            +S+LF+PY +    L +R+V++PM    + N    +    L  Y  + +   G ++ E TAV           GI+ +  +E   K    +H  GA    QL H GR +       G    + +  P S   +I            P  +   +I E I  +++AAL +  AGFD IE+ GAHGYLI++F
Sbjct:    2 NSKLFSPYTIKNVTLKNRIVMSPMCMYSSGNEDGRVTNFHLIHYGTRAAGQVGLVMVEATAVLAEGRISNKDLGIWDDNLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAEL-----GTNAFAPSAIPFSDTMKI------------PVEMNIQQIKETILAFQRAALRSKQAGFDVIELHGAHGYLINEF 174          

HSP 2 Score: 21.557 bits (44), Expect = 4.680e-12
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  678 RTDGLGGTIENHWKF 722
            RTD  GG+ EN ++F
Sbjct:  182 RTDEYGGSPENRYRF 196          
BLAST of DY259908 vs. ExPASy Swiss-Prot
Match: NAMA_BACC0 (NADPH dehydrogenase OS=Bacillus cereus (strain AH820) GN=namA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.077e-12
Identity = 55/189 (29.10%), Postives = 85/189 (44.97%), Query Frame = 1
Query:  103 RLFTPYNMGKFNLSHRVVLAPMTRCRALNG---IPGPALATYYQQRSTPGGFLISEGTAVSPTAPGFPHVPGIYTEEQVEAWKKVVDAVHAKGAIIFCQLWHVGRASHQVYQPGGAAPISST-NEPISRRWRILMPDGSYATYPNPQALQTSEIPEVIDQYRQAALNAIPAGFDGIEIPGAHGYLIDQF 657
            +LF+PY +    L +R+V++PM    + N    +    L  Y  + +   G ++ E TAV P         GI+ +  +E   K    +H  GA    QL H GR +    +    AP +   NE                T   P  +   +I + +  ++QAA+ +  AGFD IEI GAHGYLI++F
Sbjct:    4 KLFSPYTIKDVTLKNRIVMSPMCMYSSENEDGQVTNFHLVHYGTRAAGQVGLVMIEATAVLPGGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAE--LETDALAPSAVPFNE----------------TMKTPVEMSKHQIKDTVLAFQQAAIRSKQAGFDVIEIHGAHGYLINEF 174          

HSP 2 Score: 21.9422 bits (45), Expect = 6.077e-12
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  669 NHDRTDGLGGTIENHWKF 722
            ++ RTD  GG+ EN ++F
Sbjct:  179 SNKRTDEYGGSPENRYRF 196          
BLAST of DY259908 vs. ExPASy Swiss-Prot
Match: NAMA_BACCR (NADPH dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=namA PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 7.891e-12
Identity = 55/190 (28.95%), Postives = 88/190 (46.32%), Query Frame = 1
Query:   97 DSRLFTPYNMGKFNLSHRVVLAPMTRCRALNG---IPGPALATYYQQRSTPGGFLISEGTAVSPTAPGFPHVPGIYTEEQVEAWKKVVDAVHAKGAIIFCQLWHVGRASHQVYQPGGAAPISSTNEPISRRWRILMPDGSYATYPNPQALQTSEIPEVIDQYRQAALNAIPAGFDGIEIPGAHGYLIDQF 657
            +S+LF+PY +    L +R+V++PM    + N    +    L  Y  + +   G ++ E TAV        +  GI+ +  +E   K    +H  GA    QL H GR +         AP +    P + + +I            P  +   +I E I  +++AAL +  AGFD IE+ GAHGYLI++F
Sbjct:    2 NSKLFSPYTIKNVTLKNRIVMSPMCMYSSGNEDGRVTNFHLIHYGTRAAGQVGLVMVEATAVLAEGRISNNDLGIWDDNLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAE--LDTNAFAPSAI---PFNDKMKI------------PVEMNIQQIKETILAFQRAALRSKQAGFDVIELHGAHGYLINEF 174          

HSP 2 Score: 21.557 bits (44), Expect = 7.891e-12
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  678 RTDGLGGTIENHWKF 722
            RTD  GG+ EN ++F
Sbjct:  182 RTDKYGGSPENRYRF 196          
BLAST of DY259908 vs. ExPASy Swiss-Prot
Match: NAMA_BACC4 (NADPH dehydrogenase OS=Bacillus cereus (strain B4264) GN=namA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.891e-12
Identity = 55/190 (28.95%), Postives = 87/190 (45.79%), Query Frame = 1
Query:   97 DSRLFTPYNMGKFNLSHRVVLAPMTRCRALN---GIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGFPHVPGIYTEEQVEAWKKVVDAVHAKGAIIFCQLWHVGRASHQVYQPGGAAPISSTNEPISRRWRILMPDGSYATYPNPQALQTSEIPEVIDQYRQAALNAIPAGFDGIEIPGAHGYLIDQF 657
            +S+LF+PY +    L +R+V++PM    + N    +    L  Y  + +   G ++ E TAV           GI+ +  +E   K    +H  GA    QL H GR +         AP +    P + + +I            P  +   +I E I  +++AAL +  AGFD IE+ GAHGYLI++F
Sbjct:    2 NSKLFSPYTIKNVTLKNRIVMSPMCMYSSGNEDGSVTNFHLIHYGTRAAGQVGLVMVEATAVLAEGRISNKDLGIWDDNLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAE--LDTNAFAPSAI---PFNDKMKI------------PVEMNIQQIKETILAFQRAALRSKQAGFDVIELHGAHGYLINEF 174          

HSP 2 Score: 21.557 bits (44), Expect = 7.891e-12
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  678 RTDGLGGTIENHWKF 722
            RTD  GG+ EN ++F
Sbjct:  182 RTDKYGGSPENRYRF 196          
BLAST of DY259908 vs. ExPASy Swiss-Prot
Match: NAMA_BACHK (NADPH dehydrogenase OS=Bacillus thuringiensis subsp. konkukian GN=namA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.169e-11
Identity = 56/190 (29.47%), Postives = 86/190 (45.26%), Query Frame = 1
Query:   97 DSRLFTPYNMGKFNLSHRVVLAPMTRCRALNG---IPGPALATYYQQRSTPGGFLISEGTAVSPTAPGFPHVPGIYTEEQVEAWKKVVDAVHAKGAIIFCQLWHVGRASHQVYQPGGAAPISSTNEPISRRWRILMPDGSYATYPNPQALQTSEIPEVIDQYRQAALNAIPAGFDGIEIPGAHGYLIDQF 657
            +S LF+PY +    L +R+V++PM    + N    +    L  Y  + +   G ++ E TAV P         GI+ +  +E   K    +H  GA    QL H GR +    +    AP +    P +   +I            P  +   +I   I  ++QAA+ +  AGFD IEI GAHGYLI++F
Sbjct:    2 NSELFSPYTIKDVTLKNRIVMSPMCMYSSENEDGQVTNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAE--LETDALAPSAI---PFNETMKI------------PVEMSIQQIKNTILAFQQAAVRSKQAGFDVIEIHGAHGYLINEF 174          
BLAST of DY259908 vs. ExPASy Swiss-Prot
Match: NAMA_BACC3 (NADPH dehydrogenase OS=Bacillus cereus (strain 03BB102) GN=namA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.169e-11
Identity = 56/190 (29.47%), Postives = 86/190 (45.26%), Query Frame = 1
Query:   97 DSRLFTPYNMGKFNLSHRVVLAPMTRCRALNG---IPGPALATYYQQRSTPGGFLISEGTAVSPTAPGFPHVPGIYTEEQVEAWKKVVDAVHAKGAIIFCQLWHVGRASHQVYQPGGAAPISSTNEPISRRWRILMPDGSYATYPNPQALQTSEIPEVIDQYRQAALNAIPAGFDGIEIPGAHGYLIDQF 657
            +S LF+PY +    L +R+V++PM    + N    +    L  Y  + +   G ++ E TAV P         GI+ +  +E   K    +H  GA    QL H GR +    +    AP +    P +   +I            P  +   +I   I  ++QAA+ +  AGFD IEI GAHGYLI++F
Sbjct:    2 NSELFSPYTIKDVTLKNRIVMSPMCMYSSENEDGQVTNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAE--LETDALAPSAV---PFNETMKI------------PVEMSIQQIKNTILAFQQAAVRSKQAGFDVIEIHGAHGYLINEF 174          
BLAST of DY259908 vs. ExPASy Swiss-Prot
Match: NAMA_BACAH (NADPH dehydrogenase OS=Bacillus thuringiensis (strain Al Hakam) GN=namA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.169e-11
Identity = 56/190 (29.47%), Postives = 86/190 (45.26%), Query Frame = 1
Query:   97 DSRLFTPYNMGKFNLSHRVVLAPMTRCRALNG---IPGPALATYYQQRSTPGGFLISEGTAVSPTAPGFPHVPGIYTEEQVEAWKKVVDAVHAKGAIIFCQLWHVGRASHQVYQPGGAAPISSTNEPISRRWRILMPDGSYATYPNPQALQTSEIPEVIDQYRQAALNAIPAGFDGIEIPGAHGYLIDQF 657
            +S LF+PY +    L +R+V++PM    + N    +    L  Y  + +   G ++ E TAV P         GI+ +  +E   K    +H  GA    QL H GR +    +    AP +    P +   +I            P  +   +I   I  ++QAA+ +  AGFD IEI GAHGYLI++F
Sbjct:    2 NSELFSPYTIKDVTLKNRIVMSPMCMYSSENEDGQVTNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAE--LETDALAPSAV---PFNETMKI------------PVEMSIQQIKNTILAFQQAAVRSKQAGFDVIEIHGAHGYLINEF 174          
BLAST of DY259908 vs. ExPASy Swiss-Prot
Match: NAMA_BACCQ (NADPH dehydrogenase OS=Bacillus cereus (strain Q1) GN=namA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.330e-11
Identity = 56/189 (29.63%), Postives = 85/189 (44.97%), Query Frame = 1
Query:  103 RLFTPYNMGKFNLSHRVVLAPMTRCRALNG---IPGPALATYYQQRSTPGGFLISEGTAVSPTAPGFPHVPGIYTEEQVEAWKKVVDAVHAKGAIIFCQLWHVGRASHQVYQPGGAAPISST-NEPISRRWRILMPDGSYATYPNPQALQTSEIPEVIDQYRQAALNAIPAGFDGIEIPGAHGYLIDQF 657
            +LF+PY +    L +R+V++PM    + N    I    L  Y  + +   G ++ E TAV P         GI+ +  +E   K    +H  GA    QL H GR +    +    AP +   NE                T   P  +   +I + +  ++QAA+ +  AGFD IEI GAHGYLI++F
Sbjct:    4 KLFSPYTIKDVTLKNRIVMSPMCMYSSKNEDGQITNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKATTFIHDNGAKAAIQLAHAGRKAE--LETDALAPSAIPFNE----------------TMKMPIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEF 174          

HSP 2 Score: 21.557 bits (44), Expect = 1.330e-11
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  678 RTDGLGGTIENHWKF 722
            RTD  GG+ EN ++F
Sbjct:  182 RTDEYGGSPENRYRF 196          
BLAST of DY259908 vs. ExPASy Swiss-Prot
Match: NAMA_BACC7 (NADPH dehydrogenase OS=Bacillus cereus (strain AH187) GN=namA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.330e-11
Identity = 56/189 (29.63%), Postives = 85/189 (44.97%), Query Frame = 1
Query:  103 RLFTPYNMGKFNLSHRVVLAPMTRCRALNG---IPGPALATYYQQRSTPGGFLISEGTAVSPTAPGFPHVPGIYTEEQVEAWKKVVDAVHAKGAIIFCQLWHVGRASHQVYQPGGAAPISST-NEPISRRWRILMPDGSYATYPNPQALQTSEIPEVIDQYRQAALNAIPAGFDGIEIPGAHGYLIDQF 657
            +LF+PY +    L +R+V++PM    + N    I    L  Y  + +   G ++ E TAV P         GI+ +  +E   K    +H  GA    QL H GR +    +    AP +   NE                T   P  +   +I + +  ++QAA+ +  AGFD IEI GAHGYLI++F
Sbjct:    4 KLFSPYTIKDVTLKNRIVMSPMCMYSSKNEDGQITNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKATTFIHDNGAKAAIQLAHAGRKAE--LETDALAPSAIPFNE----------------TMKMPIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEF 174          

HSP 2 Score: 21.557 bits (44), Expect = 1.330e-11
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  678 RTDGLGGTIENHWKF 722
            RTD  GG+ EN ++F
Sbjct:  182 RTDEYGGSPENRYRF 196          
BLAST of DY259908 vs. ExPASy Swiss-Prot
Match: OYEC_SCHPO (Putative NADPH dehydrogenase C23G7.10c OS=Schizosaccharomyces pombe GN=SPBC23G7.10c PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.994e-11
Identity = 58/195 (29.74%), Postives = 90/195 (46.15%), Query Frame = 1
Query:  100 SRLFTPYNMGKFNLSHRVVLAPMTRCRALNGIPGPALATYYQQRSTPG----GFLISEGTAVSPTAPGFPHVPGIYTEEQVEAWKKVVDAVHAKGAIIFCQLWHVGR-----ASHQVYQPGGAAPISSTNE---PISRRWRILMPDGSYATYPNPQALQTSEIPEVIDQYRQAALNAIPAGFDGIEIPGAHGYLI 648
            ++LFTP  +      +R+ ++PM  C       G     +       G    G ++ E TAVSP     P+  G++ E Q++  +++V+  H++   I  QL H GR     A ++ Y     A     N+   P   RW     D ++A    P  L   +  E++D++  AA  A+  GFD IEI GAHGYLI
Sbjct:   31 TKLFTPLKIRGVEFHNRMFVSPM--CTYSADQEGHLTDFHLVHLGAMGMRGPGLVMVEATAVSPEGRISPNDSGLWMESQMKPLRRIVEFAHSQNQKIGIQLAHAGRKASTTAPYRGYTVATEAQGGWENDVYGPNEDRW-----DENHA---QPHKLTEKQYDELVDKFVVAAKRAVEIGFDVIEIHGAHGYLI 215          
The following BLAST results are available for this feature:
BLAST of DY259908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
NAMA_BACC24.680e-1228.95NADPH dehydrogenase OS=Bacillus cereus (strain G98... [more]
NAMA_BACC06.077e-1229.10NADPH dehydrogenase OS=Bacillus cereus (strain AH8... [more]
NAMA_BACCR7.891e-1228.95NADPH dehydrogenase OS=Bacillus cereus (strain ATC... [more]
NAMA_BACC47.891e-1228.95NADPH dehydrogenase OS=Bacillus cereus (strain B42... [more]
NAMA_BACHK1.169e-1129.47NADPH dehydrogenase OS=Bacillus thuringiensis subs... [more]
NAMA_BACC31.169e-1129.47NADPH dehydrogenase OS=Bacillus cereus (strain 03B... [more]
NAMA_BACAH1.169e-1129.47NADPH dehydrogenase OS=Bacillus thuringiensis (str... [more]
NAMA_BACCQ1.330e-1129.63NADPH dehydrogenase OS=Bacillus cereus (strain Q1)... [more]
NAMA_BACC71.330e-1129.63NADPH dehydrogenase OS=Bacillus cereus (strain AH1... [more]
OYEC_SCHPO1.994e-1129.74Putative NADPH dehydrogenase C23G7.10c OS=Schizosa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259908 ID=DY259908; Name=DY259908; organism=Citrus clementina; type=EST; length=1090bp
CAATAGATCATCGTCCTCAGAAAACTCCGAAGCATCAGATCATCTTTTAA
TTTCTATTTTTCTTCAGGAATAGAAATGGCAGAAACTACAGCGAATGACA
GCAGGCTCTTTACTCCATACAATATGGGCAAGTTCAACCTCTCTCACAGG
GTGGTGCTTGCGCCGATGACAAGATGCAGAGCTTTGAATGGGATTCCAGG
GCCAGCTTTGGCTACTTACTATCAGCAGAGGTCAACGCCTGGCGGCTTTC
TCATCTCTGAAGGCACTGCGGTCTCTCCTACGGCTCCCGGTTTTCCACAT
GTCCCAGGAATTTACACAGAGGAACAAGTAGAGGCGTGGAAGAAGGTGGT
AGATGCGGTTCATGCTAAGGGGGCCATCATTTTCTGTCAACTCTGGCATG
TTGGCCGTGCTTCTCATCAAGTTTATCAACCTGGTGGAGCTGCTCCAATA
TCATCAACGAACGAGCCCATTTCAAGGAGGTGGAGAATTCTTATGCCAGA
TGGGTCTTATGCCACATACCCCAACCCGCAAGCCTTGCAAACCTCTGAAA
TACCTGAGGTGATAGACCAATACCGCCAGGCAGCACTCAATGCTATTCCA
GCAGGTTTTGATGGAATTGAAATCCCTGGAGCCCATGGCTATCTAATTGA
CCAATTTTGGAAGATGGGAATCATGACCGAACAGATGGATTAGGTGGGAC
AATTGAAAATCATTGGAAATTCTAATGGATTGGGTCCAAAAATTATTGGA
ACTTATGGGGGGCAACCAGGTGGCCGGGAAAAGGCCCCCGGCAATGGACC
CCCTGGAGGCCAAAAACCCGAATCCCCCGGGGTCAGGGTTGGGGGGTTAT
CGAGGGATTTAACAGGCCCCGAAAAAAGCGGGGGGGCAACTCCCTTTTTT
GTGGGGGAACCCCCCCCCAAAACCCGCTTTAGGGCGCAAAAAAATCCGGG
GAACCCGGGCCGAAAAAAAAAAAACCCCCCCCTTTTGGGGACTTGGAAAA
AGGGTCTACAGAGGGAATTTTTTTTTTTGATGGGGGGCGCCTCCTCCCGG
GAGGGCAGGAGGCCCCCCCCTTGGGGAGAGAAAAGGGGGG
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