DY259918

Overview
NameDY259918
Unique NameDY259918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length894
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.715e-37
Identity = 87/245 (35.51%), Postives = 121/245 (49.39%), Query Frame = 3
Query:   24 PDAILNGLEIMKMKNLQGSLGNSSSKKHXXXXXXXXXXXXXAALL--AGILFMLCRKRR-QLPQLGHSKAWIPVSINGGNSHTMGSKYSHGTTTSANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSG-LPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            P A+L G  + K  N    L N + +KH               LL   G L +LC  R+ +    G S       +   ++   G     G          Y      ++EAT+NF +   +G G FG VY G + DG +VAVK     S     +F TE+ +LS+  HR+LV LIGYC+E +  IL+YEYM NG+L  HL+GS     L W  +L+I   +A+GL YLHTG   ++I RDVKS+
Sbjct:  502 PSALLKGKVLFKYNN-NPELQNEAQRKHFWQILGISIAAVAILLLLVGGSLVLLCALRKTKRADKGDSTETKKKGLVAYSAVRGGHLLDEGVA--------YFISLPVLEEATDNFSKK--VGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSS 735          

HSP 2 Score: 47.3654 bits (111), Expect = 5.715e-37
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFKRPQ 894
            NIL D N  AKV+DFG+S+  TE D THV++  K  +GY D EY+   Q
Sbjct:  736 NILLDINMRAKVSDFGLSRQ-TEEDLTHVSSVAKGTVGYLDPEYYASQQ 783          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.646e-36
Identity = 71/155 (45.81%), Postives = 89/155 (57.42%), Query Frame = 3
Query:  321 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRS-------------QQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            RF +  V   TNNF++  VIG GGFG VY G L DGT++AVK  N  S              Q   EFQ E E+L    HR+L S +GYCD+   M LIYEYM NG L+ +L       LSW+++L I I SA+GL YLH G    ++ RDVK+A
Sbjct:  556 RFTYSEVSSITNNFNK--VIGKGGFGIVYLGSLEDGTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLSSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTA 708          

HSP 2 Score: 46.2098 bits (108), Expect = 1.646e-36
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYF 882
            NIL ++N  AK+ADFG+SK   E D +HV TA+    GY D EY+
Sbjct:  709 NILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYY 753          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.145e-36
Identity = 66/142 (46.48%), Postives = 91/142 (64.08%), Query Frame = 3
Query:  321 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            RF +  V+  T+NF+   V+G GGFG VY G LN    +AVK  +  S QG  EF+ E+E+L +  H +LVSL+GYCDE++ + L+YEY  NG LK HL G  G   L W  +L+I + +A+GL YLHTG    ++ RDVK+
Sbjct:  562 RFTYSEVEALTDNFER--VLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKT 701          

HSP 2 Score: 48.1358 bits (113), Expect = 2.145e-36
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFK 885
            NIL DE+F AK+ADFG+S++      THV+TA+    GY D EY++
Sbjct:  703 NILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYR 748          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.636e-36
Identity = 72/146 (49.32%), Postives = 92/146 (63.01%), Query Frame = 3
Query:  303 NSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVK 740
            N  S   + F  +  AT++F +   IG GG+GKVYKG L  G  VAVKR    S QG  EF TEIE+LS+  HR+LVSL+GYCD+K E +L+YEYM NG+L+  L       LS   +L I +GSARG+ YLHT     +I RD+K
Sbjct:  612 NMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIK 757          

HSP 2 Score: 38.5058 bits (88), Expect = 3.636e-36
Identity = 22/49 (44.90%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSK----TGTEIDPTHVNTALKRNLGYFDLEYF 882
            NIL D     KVADFG+SK     G  +   HV T +K   GY D EY+
Sbjct:  760 NILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYY 808          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.047e-35
Identity = 71/149 (47.65%), Postives = 94/149 (63.09%), Query Frame = 3
Query:  300 ANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPS-LSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            AN  S Y +  VAV   TNNF+    +G GGFG VY G +ND  +VAVK  +  S QG  +F+ E+++L +  H +LV+L+GYCDE   ++LIYEYM NG LK HL G    S LSW+ +L I   +A+GL YLH G    +I RD+KS
Sbjct:  576 ANKRS-YTYEEVAV--ITNNFERP--LGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKS 719          

HSP 2 Score: 45.0542 bits (105), Expect = 1.047e-35
Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFK 885
            NIL D NF AK+ DFG+S++      THV+T +  + GY D EY++
Sbjct:  721 NILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYR 766          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.016e-35
Identity = 69/142 (48.59%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  321 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            RF +  V E T N      +G GGFG VY G+LN   +VAVK  +  S QG  EF+ E+E+L +  H +LV+L+GYCDE++   LIYEYM NG L  HL G  G   L+W  +L+I I +A GL YLHTG   A++ RDVKS
Sbjct:  555 RFTYSEVMEMTKNLQRP--LGEGGFGVVYHGDLNGSEQVAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKS 694          

HSP 2 Score: 42.743 bits (99), Expect = 3.016e-35
Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKT-GTEIDPTHVNTALKRNLGYFDLEYF 882
            NIL DE F AK+ADFG+S++     D + V+T +   LGY D EY+
Sbjct:  696 NILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYY 741          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 3.925e-35
Identity = 66/143 (46.15%), Postives = 92/143 (64.34%), Query Frame = 3
Query:  324 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYG--SGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            F    +++AT  +    +IG GGFG VY+G L+DG +VAVK  +  S QG  EF  E+ +LS  +H +LV L+GYC+E ++ IL+Y +M NG+L   LYG  S    L W  +L I +G+ARGL YLHT   ++VI RDVKS+
Sbjct:  586 FTLEYIEQATEQYKT--LIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSS 726          

HSP 2 Score: 43.8986 bits (102), Expect = 3.925e-35
Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFKRPQ 894
            NIL D++  AKVADFG SK   +   ++V+  ++   GY D EY+K  Q
Sbjct:  727 NILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQ 775          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.472e-34
Identity = 75/198 (37.88%), Postives = 119/198 (60.10%), Query Frame = 3
Query:  153 LLAGILFMLCRKRRQLPQLGHSKAWIPVSINGGNSHTMGSKYSHGTTTSANSNSGYR-FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVK 740
            ++  I+F++ RK+++  +            +G  S T G+  S   ++S++  +  R F +  V + T NF+   V+G GGFG VY G L+D T+VAVK  +  S QG  EF+ E+E+L +  HRHLV L+GYCD+ + + LIYEYME G L+ ++ G   +  LSW+ +++I + +A+GL YLH G    ++ RDVK
Sbjct:  513 VILAIVFVVIRKKQRTNEA-----------SGPRSFTTGTVKSDARSSSSSIITKERKFTYSEVLKMTKNFER--VLGKGGFGTVYHGNLDD-TQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVK 696          

HSP 2 Score: 38.891 bits (89), Expect = 1.472e-34
Identity = 19/46 (41.30%), Postives = 28/46 (60.87%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFK 885
            NIL +E   AK+ADFG+S++      +HV T +    GY D EY++
Sbjct:  699 NILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYR 744          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.234e-34
Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 3
Query:  375 VIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPS--LSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            +IG GGFG VY+G L+DG +VAVK  +  S QG  EF  E+ +LS  +H +LV L+GYC+E ++ IL+Y +M NG+L   LYG       L W  +L I +G+ARGL YLHT   ++VI RDVKS+
Sbjct:  600 LIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSS 725          

HSP 2 Score: 43.1282 bits (100), Expect = 4.234e-34
Identity = 21/49 (42.86%), Postives = 29/49 (59.18%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFKRPQ 894
            NIL D +  AKVADFG SK   +   ++V+  ++   GY D EY+K  Q
Sbjct:  726 NILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQ 774          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.186e-34
Identity = 83/248 (33.47%), Postives = 128/248 (51.61%), Query Frame = 3
Query:    9 LYDTYPDAILN-GLEIMKMKNLQG-SLGNSSSKKHXXXXXXXXXXXXXAALLAGILFMLCRKRRQLPQLGHSKAWIPVSINGGNSHTMGSKYSHGTTTSANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYG-SGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            L  T P ++   GLE++   N +  S G++ +K               AA+L  +L ++   R++ P        + V +   +  TM   Y++    S       +F +  V + TNNF    V+G GGFG V  G +N   +VAVK  +  S QG  EF+ E+++L +  H +LVSL+GYCDE + + LIYE++ NG L+ HL G  G P ++W  +L I   +A GL YLH G    ++ RDVK+
Sbjct:  470 LNGTIPQSLQRKGLELLYQGNPRLISPGSTETKSGKSFPVTIVASVGSAAILIVVLVLVLFLRKKKPSA------VEVVLPRPSRPTMNVPYANSPEPSIEMKKR-KFTYSEVTKMTNNFGR--VVGEGGFGVVCHGTVNGSEQVAVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGKPIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKT 708          

HSP 2 Score: 43.1282 bits (100), Expect = 7.186e-34
Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYF 882
            NIL DE++ AK+ADFG+S++      +HV+T +    GY D EY+
Sbjct:  710 NILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYY 754          
The following BLAST results are available for this feature:
BLAST of DY259918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
Y1677_ARATH5.715e-3735.51Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH1.646e-3645.81Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH2.145e-3646.48Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH3.636e-3649.32Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH1.047e-3547.65Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH3.016e-3548.59Probable LRR receptor-like serine/threonine-protei... [more]
NORK_MEDTR3.925e-3546.15Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y5189_ARATH1.472e-3437.88Probable LRR receptor-like protein kinase At1g5189... [more]
NORK_PEA4.234e-3449.21Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5596_ARATH7.186e-3433.47Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259918 ID=DY259918; Name=DY259918; organism=Citrus clementina; type=EST; length=894bp
GATCTACTCTTTATGACACTTACCCTGATGCCATTCTAAATGGGCTGGAG
ATCATGAAAATGAAAAACTTGCAGGGCAGCCTCGGTAATTCGAGCTCAAA
GAAGCATGTCGGAGTTATCGTGGGAGTAACCATTGGGGTATCTGTTGCGG
CATTGTTGGCTGGAATTCTTTTTATGTTGTGCAGGAAAAGAAGACAATTG
CCACAGCTGGGACATTCAAAGGCATGGATACCTGTATCCATTAATGGAGG
AAATTCTCACACAATGGGAAGTAAATACTCTCATGGAACCACGACAAGCG
CCAATTCTAACTCGGGTTACCGCTTCCCTTTTGTTGCTGTTCAAGAAGCC
ACAAACAACTTCGACGAGAGCTGGGTTATTGGGATTGGTGGTTTTGGGAA
GGTATACAAAGGAGAGCTGAATGATGGTACAAAAGTGGCTGTTAAGAGGG
GAAACCCCCGATCCCAGCAGGGACTTGCAGAGTTCCAAACCGAGATTGAG
ATGCTGTCTCAGTTCCGGCACCGCCATCTGGTTTCATTAATTGGATATTG
TGATGAAAAGAATGAGATGATCTTGATTTATGAATATATGGAAAATGGGA
CCCTCAAGGGTCATCTCTATGGCTCCGGTCTTCCCAGCTTGAGTTGGAAG
CAGAAACTTGAGATTTGCATTGGATCTGCTAGGGGACTTCATTACCTTCA
CACTGGCTATGCCAAAGCAGTTATTCCACGTGATGTAAAGTCTGCCAAAT
ATCCTACCTGATGAGAACTTCATGGCAAAGGTTGCTGATTTTGGAATGTC
CAAAACAGGGACTGAAATTGATCCAACCCATGTGAATACGGCATTGAAAA
GAAATTTGGGGTATTTTGATCTCGAATACTTCAAAAGGCCTCAA
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