DY259918

Overview
NameDY259918
Unique NameDY259918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length894
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.745e-33
Identity = 64/142 (45.07%), Postives = 93/142 (65.49%), Query Frame = 3
Query:  321 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            +  +  V + TNNF+   V+G GGFG VY G L DG +VAVK  +  S QG  EF+ E+E+L +  HRHLV L+GYCD+ + + LIYEYM NG L+ ++ G  G   L+W+ +++I + +A+GL YLH G    ++ RDVK+
Sbjct:  573 KITYPEVLKMTNNFER--VLGKGGFGTVYHGNL-DGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKT 711          

HSP 2 Score: 37.7354 bits (86), Expect = 7.745e-33
Identity = 19/46 (41.30%), Postives = 28/46 (60.87%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFK 885
            NIL +E   AK+ADFG+S++       HV+T +    GY D EY++
Sbjct:  713 NILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYR 758          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.013e-32
Identity = 67/145 (46.21%), Postives = 89/145 (61.38%), Query Frame = 3
Query:  321 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHL---YGSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            RF F  +Q AT+NF    ++G GGFG VYKG L +GT VAVKR       G  +FQTE+EM+    HR+L+ L G+C    E +L+Y YM NG++   L   YG   PSL W +++ I +G+ARGL YLH      +I RDVK+A
Sbjct:  287 RFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGE-KPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAA 430          

HSP 2 Score: 38.1206 bits (87), Expect = 1.013e-32
Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFKRPQ 894
            NIL DE+F A V DFG++K   + D +HV TA++  +G+   EY    Q
Sbjct:  431 NILLDESFEAIVGDFGLAKLLDQRD-SHVTTAVRGTIGHIAPEYLSTGQ 478          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.708e-32
Identity = 64/142 (45.07%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  324 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLP--SLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            F    ++ ATNNFD    IG GGFG VYKG L DG  +AVK+ + +S+QG  EF TEI M+S  +H +LV L G C E  E++L+YEY+EN +L   L+G+      L W  + ++CIG A+GL YLH      ++ RD+K+
Sbjct:  655 FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKA 796          

HSP 2 Score: 37.3502 bits (85), Expect = 1.708e-32
Identity = 18/47 (38.30%), Postives = 29/47 (61.70%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFKR 888
            N+L D +  AK++DFG++K   E + TH++T +   +GY   EY  R
Sbjct:  798 NVLLDLSLNAKISDFGLAKLDEE-ENTHISTRIAGTIGYMAPEYAMR 843          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.995e-32
Identity = 69/141 (48.94%), Postives = 95/141 (67.38%), Query Frame = 3
Query:  324 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            F +  +  AT+NF+ S  IG GG+GKVYKG L  GT VA+KR    S QG  EF TEIE+LS+  HR+LVSL+G+CDE+ E +L+YEYMENGTL+ ++       L +  +L I +GSA+G+ YLHT     +  RD+K++
Sbjct:  613 FTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKAS 753          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.224e-32
Identity = 65/142 (45.77%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  324 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLP--SLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            F    ++ ATNNFD    IG GGFG VYKG L DG  +AVK+ + +S+QG  EF TEI M+S  +H +LV L G C E  E++L+YEY+EN +L   L+G+      L W  + +ICIG A+GL YLH      ++ RD+K+
Sbjct:  657 FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKA 798          

HSP 2 Score: 36.5798 bits (83), Expect = 2.224e-32
Identity = 17/47 (36.17%), Postives = 29/47 (61.70%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFKR 888
            N+L D +  AK++DFG++K   + + TH++T +   +GY   EY  R
Sbjct:  800 NVLLDLSLNAKISDFGLAKLNDD-ENTHISTRIAGTIGYMAPEYAMR 845          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.238e-32
Identity = 68/145 (46.90%), Postives = 89/145 (61.38%), Query Frame = 3
Query:  321 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKR-GNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHL--YGSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            RF    +Q A++NF    ++G GGFGKVYKG L DGT VAVKR    R+Q G  +FQTE+EM+S   HR+L+ L G+C    E +L+Y YM NG++   L       P L W ++  I +GSARGL YLH      +I RDVK+A
Sbjct:  276 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAA 420          

HSP 2 Score: 38.1206 bits (87), Expect = 2.238e-32
Identity = 20/44 (45.45%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEY 879
            NIL DE F A V DFG++K   +   THV TA++  +G+   EY
Sbjct:  421 NILLDEEFEAVVGDFGLAKL-MDYKDTHVTTAVRGTIGHIAPEY 463          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.901e-32
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  321 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYG-SGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            RF +  V + TNNF    V+G GGFG V  G +N   +VAVK  +  S QG   F+ E+++L +  H +LVSL+GYCDE++ + LIYE++  G L+ HL G SG   ++W  +L I + +A GL YLH+G    ++ RD+K+
Sbjct:  568 RFTYSEVIKMTNNFQR--VVGEGGFGVVCHGTINGSEQVAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKT 707          

HSP 2 Score: 42.3578 bits (98), Expect = 2.901e-32
Identity = 20/46 (43.48%), Postives = 29/46 (63.04%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFK 885
            NIL DE   AK+ADFG+S++      TH++T +    GY D EY++
Sbjct:  709 NILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQ 754          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 119.783 bits (299), Expect = 4.912e-32
Identity = 63/136 (46.32%), Postives = 89/136 (65.44%), Query Frame = 3
Query:  345 EATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLY--GSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            ++TN+FD++ +IG GGFG VYK  L DG KVA+K+ +    Q   EF+ E+E LS+ +H +LV L G+C  KN+ +LIY YMENG+L   L+    G   L WK +L I  G+A+GL YLH G    ++ RD+KS+
Sbjct:  729 DSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSS 864          

HSP 2 Score: 39.6614 bits (91), Expect = 4.912e-32
Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEY 879
            NIL DENF + +ADFG+++  +  + THV+T L   LGY   EY
Sbjct:  865 NILLDENFNSHLADFGLARLMSPYE-THVSTDLVGTLGYIPPEY 907          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.939e-32
Identity = 76/201 (37.81%), Postives = 111/201 (55.22%), Query Frame = 3
Query:  153 LLAGILFMLCRKRRQLPQLGHSKAWIPVSINGGNSHTMGSKYSHGTTTSANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEK--NEMILIYEYMENGTLKGHLYG--SGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            L+A  +F     RR+     +S A +P +I+   S    +K              + F +  ++EATNNFD S  +G GGFG VY G+L DG  VAVKR    + +   +F+ E+E+L+  RH +LV+L G C  K   +++L+YEY+ NGTL  HL+G  +   SL W  +L+I + +A  L YLH   A  +I RDVKS
Sbjct:  279 LIAASIFWYVYHRRKTKSYRNSSALLPRNISSDPS----AKSFDIEKAEELLVGVHIFSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFG-CSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLH---ASKIIHRDVKS 471          

HSP 2 Score: 43.8986 bits (102), Expect = 4.939e-32
Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEY 879
            NIL D+NF  KVADFG+S+    +D THV+TA +   GY D +Y
Sbjct:  473 NILLDQNFNVKVADFGLSRL-FPMDKTHVSTAPQGTPGYVDPDY 515          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.091e-31
Identity = 63/142 (44.37%), Postives = 88/142 (61.97%), Query Frame = 3
Query:  324 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKR-GNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            F F  +  AT+ F    ++G GGFG VY+G+  DGT VAVKR  +     G ++F+TE+EM+S   HR+L+ LIGYC   +E +L+Y YM NG++   L     P+L W  + +I IG+ARGL YLH      +I RDVK+A
Sbjct:  287 FTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRL--KAKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAA 426          

HSP 2 Score: 36.5798 bits (83), Expect = 1.091e-31
Identity = 21/49 (42.86%), Postives = 28/49 (57.14%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFKRPQ 894
            NIL DE F A V DFG++K     D +HV TA++  +G+   EY    Q
Sbjct:  427 NILLDEYFEAVVGDFGLAKLLNHED-SHVTTAVRGTVGHIAPEYLSTGQ 474          
The following BLAST results are available for this feature:
BLAST of DY259918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
Y1518_ARATH7.745e-3345.07Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH1.013e-3246.21Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH1.708e-3245.07Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH1.995e-3248.94Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH2.224e-3245.77Probable LRR receptor-like serine/threonine-protei... [more]
BAK1_ARATH2.238e-3246.90BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
PAM74_ARATH2.901e-3242.25Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_ARATH4.912e-3246.32Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y1839_ARATH4.939e-3237.81Probable serine/threonine-protein kinase At1g18390... [more]
Y2239_ARATH1.091e-3144.37Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259918 ID=DY259918; Name=DY259918; organism=Citrus clementina; type=EST; length=894bp
GATCTACTCTTTATGACACTTACCCTGATGCCATTCTAAATGGGCTGGAG
ATCATGAAAATGAAAAACTTGCAGGGCAGCCTCGGTAATTCGAGCTCAAA
GAAGCATGTCGGAGTTATCGTGGGAGTAACCATTGGGGTATCTGTTGCGG
CATTGTTGGCTGGAATTCTTTTTATGTTGTGCAGGAAAAGAAGACAATTG
CCACAGCTGGGACATTCAAAGGCATGGATACCTGTATCCATTAATGGAGG
AAATTCTCACACAATGGGAAGTAAATACTCTCATGGAACCACGACAAGCG
CCAATTCTAACTCGGGTTACCGCTTCCCTTTTGTTGCTGTTCAAGAAGCC
ACAAACAACTTCGACGAGAGCTGGGTTATTGGGATTGGTGGTTTTGGGAA
GGTATACAAAGGAGAGCTGAATGATGGTACAAAAGTGGCTGTTAAGAGGG
GAAACCCCCGATCCCAGCAGGGACTTGCAGAGTTCCAAACCGAGATTGAG
ATGCTGTCTCAGTTCCGGCACCGCCATCTGGTTTCATTAATTGGATATTG
TGATGAAAAGAATGAGATGATCTTGATTTATGAATATATGGAAAATGGGA
CCCTCAAGGGTCATCTCTATGGCTCCGGTCTTCCCAGCTTGAGTTGGAAG
CAGAAACTTGAGATTTGCATTGGATCTGCTAGGGGACTTCATTACCTTCA
CACTGGCTATGCCAAAGCAGTTATTCCACGTGATGTAAAGTCTGCCAAAT
ATCCTACCTGATGAGAACTTCATGGCAAAGGTTGCTGATTTTGGAATGTC
CAAAACAGGGACTGAAATTGATCCAACCCATGTGAATACGGCATTGAAAA
GAAATTTGGGGTATTTTGATCTCGAATACTTCAAAAGGCCTCAA
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