DY259927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS16_CAEEL (40S ribosomal protein S16 OS=Caenorhabditis elegans GN=rps-16 PE=1 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 4.522e-37 Identity = 71/113 (62.83%), Postives = 93/113 (82.30%), Query Frame = 3 Query: 60 ESVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 +SVQ FGR TA AV +CK+G+GLIK+NG P+E +EP+ILR K EP+LL+G+ RF VD+RIRV GGGH + IYA+RQ++AKALVA+Y KYVDEQSK+E+K+I YD++LL Sbjct: 6 QSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDVDIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLL 118
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS16_CANAL (40S ribosomal protein S16 OS=Candida albicans GN=RPS16 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 3.828e-36 Identity = 71/114 (62.28%), Postives = 90/114 (78.95%), Query Frame = 3 Query: 57 TESVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 T+SVQ FG+ TA AV + K G+GLIKING PI LV+PEILRFK +EP+ L+G +F G+D+R++V GGGH S +YAIRQ+IAK LVA++QKYVDE SK E+K I YD+TLL Sbjct: 3 TQSVQTFGKKKTATAVAHVKAGKGLIKINGSPITLVQPEILRFKVYEPLTLVGLDKFQGIDIRVKVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEASKNELKKIFASYDKTLL 116
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS16_YEAST (40S ribosomal protein S16 OS=Saccharomyces cerevisiae GN=RPS16A PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 6.529e-36 Identity = 71/112 (63.39%), Postives = 89/112 (79.46%), Query Frame = 3 Query: 63 SVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 SVQ FG+ +A AV + K G+GLIK+NG PI LVEPEILRFK +EP+LL+G +F+ +D+R+RV GGGH S +YAIRQ+IAK LVA++QKYVDEQSK E+K YDRTLL Sbjct: 6 SVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLL 117
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS16_CANGA (40S ribosomal protein S16 OS=Candida glabrata GN=RPS16 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 4.232e-35 Identity = 70/112 (62.50%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 63 SVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 SVQ FG+ +A AV + K G+GLIK+NG PI LVEPEILRFK +EP+LL+G +F +D+R+RV GGGH S +YAIRQ+IAK LVA++QK+VDEQSK E+K YDRTLL Sbjct: 6 SVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFANIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKFVDEQSKNELKKAFTSYDRTLL 117
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS16_SACEX (40S ribosomal protein S16 OS=Saccharomyces exiguus GN=RPS16 PE=3 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 9.428e-35 Identity = 68/112 (60.71%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 63 SVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 SVQ FG+ +A AV + K G+GLIK+NG PI LV+PEILRFK +EP+LL+G +F +D+R+RV GGGH S +YAIRQ+IAK L+A++QK+VDEQSK E+K YDRTLL Sbjct: 6 SVQTFGKKKSATAVAHVKAGKGLIKVNGAPITLVQPEILRFKVYEPLLLVGLDKFTNIDIRVRVTGGGHVSQVYAIRQAIAKGLIAYHQKFVDEQSKNELKRAFTLYDRTLL 117
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS16_ASHGO (40S ribosomal protein S16 OS=Ashbya gossypii GN=RPS16 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 9.428e-35 Identity = 69/112 (61.61%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 63 SVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 SVQ FG+ +A AV + K G+GLIK+NG PI LV+PEILRFK +EP+LL+G +F +D+R+RV GGGH S +YAIRQ+IAK LVA++QK+VDEQSK E+K YDRTLL Sbjct: 6 SVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVQPEILRFKVYEPLLLVGLDKFANIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKFVDEQSKNELKKAFTSYDRTLL 117
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS16_DEBHA (40S ribosomal protein S16 OS=Debaryomyces hansenii GN=RPS16 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.231e-34 Identity = 67/114 (58.77%), Postives = 88/114 (77.19%), Query Frame = 3 Query: 57 TESVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 T SVQ FG+ TA AV + K G+GLIK+NG PI LV+PEILRFK +EP+ L+G +F +D+R++V GGGH S +YAIRQ+IAK LVA++QK+VDE SK E+K + YD+TLL Sbjct: 3 TPSVQTFGKKKTATAVAHVKAGKGLIKVNGAPITLVQPEILRFKVYEPLTLVGLDKFQNIDIRVKVSGGGHVSQVYAIRQAIAKGLVAYHQKFVDEASKNELKKVFASYDKTLL 116
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS16_NEUCR (40S ribosomal protein S16 OS=Neurospora crassa GN=rps-16 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.333e-34 Identity = 66/114 (57.89%), Postives = 88/114 (77.19%), Query Frame = 3 Query: 57 TESVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 T++VQ FG+ A AV C +G+GLIK+NG P++L PEILR K +EPILLLG +F VD+R++V GGGH S +YA+RQ+IAKA+VA+Y KYVDE SK +K L+++DRTLL Sbjct: 3 TQAVQVFGKKKNATAVARCVQGKGLIKVNGVPLKLYAPEILRAKLYEPILLLGTDKFAEVDIRLKVSGGGHVSQVYAVRQAIAKAIVAYYAKYVDEHSKNTLKTALIQFDRTLL 116 HSP 2 Score: 25.409 bits (54), Expect = 1.333e-34 Identity = 12/24 (50.00%), Postives = 12/24 (50.00%), Query Frame = 1 Query: 400 VADPRRCEPXXXXXXXXXXXXQKS 471 VADPRRCEP QKS Sbjct: 117 VADPRRCEPKKFGGKGARSRFQKS 140
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS16_KLULA (40S ribosomal protein S16 OS=Kluyveromyces lactis GN=RPS16 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 2.100e-34 Identity = 68/112 (60.71%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 63 SVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 SVQ FG+ +A AV + K G+GLIK+NG PI LV+PEILRFK +EP+LL+G +F +D+R++V GGGH S +YAIRQ+IAK LVA++QK+VDEQSK E+K YDRTLL Sbjct: 6 SVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVQPEILRFKVYEPLLLVGLDKFANIDIRVKVTGGGHVSQVYAIRQAIAKGLVAYHQKFVDEQSKNELKKAFTSYDRTLL 117
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS16_DICDI (40S ribosomal protein S16 OS=Dictyostelium discoideum GN=rps16 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.989e-34 Identity = 64/121 (52.89%), Postives = 93/121 (76.86%), Query Frame = 3 Query: 36 MATAAPKTESVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 M+ AP+ VQ G+ TAVAV Y G+GLIK+NG P+E ++P+ L+ K +EP+L++G+ F+ VD+R+RV+GGG + IYAIRQ+IAK++VA++QKYVDE+SK EIK ++ YDR+LL Sbjct: 1 MSAVAPQKNVVQTHGKKRTAVAVAYATNGKGLIKVNGVPLEFIQPKNLKLKVYEPVLIVGKDVFSQVDIRVRVRGGGSVAQIYAIRQAIAKSIVAYHQKYVDEESKNEIKKKILDYDRSLL 121 HSP 2 Score: 25.409 bits (54), Expect = 4.989e-34 Identity = 12/24 (50.00%), Postives = 12/24 (50.00%), Query Frame = 1 Query: 400 VADPRRCEPXXXXXXXXXXXXQKS 471 VADPRRCEP QKS Sbjct: 122 VADPRRCEPKKFGGRGARARFQKS 145 The following BLAST results are available for this feature:
BLAST of DY259927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259927 ID=DY259927; Name=DY259927; organism=Citrus clementina; type=EST; length=1063bpback to top |