DY259927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS9_METMP (30S ribosomal protein S9P OS=Methanococcus maripaludis GN=rps9p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.044e-13 Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 66 VQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 V G+ TA+A K G G I+IN P+EL+EP+ ++ K EP++L G + +D+ I VKGGG S + A R ++ KA+V F K ++K+ + YDRTLL Sbjct: 4 VHTVGKRRTAIARATAKEGSGKIRINKKPLELMEPKYIKMKLMEPVILAG-EALSNIDVDIDVKGGGIVSQMDATRTALGKAIVEF-------TGKMDLKEKFLSYDRTLL 106
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS9_META3 (30S ribosomal protein S9P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps9p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.044e-13 Identity = 45/111 (40.54%), Postives = 62/111 (55.86%), Query Frame = 3 Query: 66 VQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 V G+ TA+A K G+G I+IN PIE+VEP+ + K EPI+L G +G+D+ I V GGG + A R ++ KA+V F E+KD V YDRT+L Sbjct: 4 VHTVGKRKTAIARATAKEGKGRIRINKKPIEIVEPKYINAKLMEPIILAG-DVVDGIDIDITVNGGGIVGQMDAARTALGKAIVEF-------TGDMELKDRFVHYDRTIL 106
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS9_METVS (30S ribosomal protein S9P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps9p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.553e-13 Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 3 Query: 66 VQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 V G+ TA+A G G I+IN P+EL+EP+ ++ K EP++L G +D+ + VKGGG S + A R ++ KA++ F K E+K++ + YDRTLL Sbjct: 4 VHTVGKRRTAIARATATEGSGKIRINKKPLELMEPKYIKMKLMEPVILAG-EILGSIDVDVDVKGGGTVSQMDAARTALGKAIIEF-------TGKMELKEMFLSYDRTLL 106
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS9_THEAC (30S ribosomal protein S9P OS=Thermoplasma acidophilum GN=rps9p PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.730e-12 Identity = 41/107 (38.32%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 78 GRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 398 G+ TAVA K+G+G++ ING P+EL +LR K EP LL+ + +D+ ++V+GGG T A R +IA+A+V KY+++ E++++ +YDRTL+ Sbjct: 5 GKRKTAVARAVAKKGKGIVTINGYPVELYPVRVLRNKIMEP-LLIAEDKAKDLDIAVKVRGGGVTGQADASRTAIARAIV----KYLND---TELENLFRQYDRTLI 103
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RLSX_METTH (Fused L13/S9 ribosomal protein OS=Methanobacterium thermoautotrophicum GN=rpl13p/rps9p PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.730e-12 Identity = 43/109 (39.45%), Postives = 60/109 (55.05%), Query Frame = 3 Query: 78 GRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLCG 404 G+ TA+A + G+G ++IN P+EL PE+ R K EP+ L G N VD+ +RV GGG A R IA+ L VD S ++K+ V+YDRT+L G Sbjct: 158 GKRKTAIARGTIREGKGRVRINKVPVELYTPELARLKIMEPLKLAG-DVINDVDINVRVVGGGIVGQAEAARMVIARGL-------VDWTSDMDLKEKFVQYDRTMLVG 258
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS9_DESK1 (30S ribosomal protein S9P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps9p PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.260e-12 Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 42 TAAPKTESVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLCG 404 T + K + V G+ T++A K G G + IN P+E ++ E+ + K EP+LL+G VD+R+ V GGG+ S A+R +IA+ LV F+ + E+K + YDR +L G Sbjct: 4 TLSDKIKIVVSSGKRKTSIARAVIKPGIGRVWINNVPVEFIQFELAKMKILEPLLLIG-DLAKTVDIRVNVHGGGYMSQAEAVRIAIARGLVEFF-------NSDEVKSLFKEYDRHMLSG 116
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS9_SULTO (30S ribosomal protein S9P OS=Sulfolobus tokodaii GN=rps9p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.034e-12 Identity = 39/117 (33.33%), Postives = 64/117 (54.70%), Query Frame = 3 Query: 54 KTESVQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLCG 404 +++ + + R A A Y G+G + +N P+E++ E++R K EP+LL G + +D +I V+GGG A R ++A+ALV F KE+++I YDRT+L G Sbjct: 4 QSQVIITYARRKMARARCYITPGKGRVFVNDIPLEIIPMEVVRMKIMEPLLLAGEKISSSIDAKIYVEGGGVMGQADAARMALARALVKF-------TGSKELEEIYKVYDRTMLAG 113
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS9_SULAC (30S ribosomal protein S9P OS=Sulfolobus acidocaldarius GN=rps9p PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 5.034e-12 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 75 FGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLCG 404 + R +A A Y K G G + +N PIE++ E++R+K EP++L G + ++ RI +GGG A R ++A+ALV F + KE+ +I YDRT+L G Sbjct: 12 YARRKSARASCYIKPGNGKVFVNDIPIEIIPIEVVRYKIMEPLVLAGDKITSSIEARIYTQGGGIMGQADAARMALARALVKF-------TNSKELVEIYKSYDRTMLAG 114
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS9_METKA (30S ribosomal protein S9P OS=Methanopyrus kandleri GN=rps9p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.034e-12 Identity = 37/113 (32.74%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 66 VQCFGRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLCG 404 VQ G+ TA+A + G G +++N P+ ++EPE+ R K EP+++ G + VD+ ++V+GGG S A R +IA+ LV + +++D + YDR +L G Sbjct: 5 VQTTGKRKTAIARAVIREGEGRVRVNKRPVNIIEPEMARMKIMEPLIIAGEDIVSQVDIDVKVQGGGWMSQAEAARIAIARGLVEW-------TGDPDLRDAYMAYDRHMLKG 110
BLAST of DY259927 vs. ExPASy Swiss-Prot
Match: RS9_AERPE (30S ribosomal protein S9P OS=Aeropyrum pernix GN=rps9p PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 8.587e-12 Identity = 40/118 (33.90%), Postives = 68/118 (57.63%), Query Frame = 3 Query: 78 GRNMTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSHIYAIRQSIAKALVAFYQ---------KYVDEQSKKEIKDILVRYDRTLLCG 404 G+ A+A + GRG + ING P+E+ E+ R K EP+L+ G + VD+R+RV+GGG A+R +IA+ LV F++ + +D+ S ++++ + +DRT+L G Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVEGGGVMGQADAVRMAIARGLVEFFRCEESDDELCRMMDKIS-RDLRTAFLEHDRTMLVG 127 The following BLAST results are available for this feature:
BLAST of DY259927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259927 ID=DY259927; Name=DY259927; organism=Citrus clementina; type=EST; length=1063bpback to top |