DY259953

Overview
NameDY259953
Unique NameDY259953
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length977
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: PKS29_DICDI (Probable polyketide synthase 29 OS=Dictyostelium discoideum GN=pks29 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.462e-11
Identity = 62/236 (26.27%), Postives = 107/236 (45.34%), Query Frame = 1
Query:   76 QLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA-------------SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGNEEKLA-VCKDLGADVCILY--KTEDFVARMKE--------ETGGKGVDVILDCLGTSHFQRN 702
            QL   +D ++  +EV I+++AT +N  D L   G                     +P  G + SG I  +G NV ++KVGDQVC  +G    +  + V    +   P   S   +A  P V  T   +++    L   ES L+H  + G+G  ++ + K    QG  +F+T G+++K   +    G+ +  +Y  + +D+V  +K         E   +GVD+IL+ L + +   N
Sbjct: 1892 QLYSKKD-KLNSNEVEIEIKATGMNYKDYLMYIGMIGTNLDIKYGKEIENCIGFNNPKIGKDFSGIITRLGSNVKKFKVGDQVCG-VGSKTSSSHIIVDYDYIYYKPLNYSHSVSALIPSVYITSLHSLYGIGSLKSNESILIHSAAGGVGISSLDLLKSKQHQGY-IFLTVGSKDKEEYLINKYGSLITAIYSSRNKDYVYEIKNKLIELGVVEQHQQGVDLILNTLSSEYMDSN 2124          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: MECR_HUMAN (Trans-2-enoyl-CoA reductase, mitochondrial OS=Homo sapiens GN=MECR PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.462e-11
Identity = 62/226 (27.43%), Postives = 108/226 (47.79%), Query Frame = 1
Query:   31 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL-PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNE---EKLA-VCKDLGADVCILYKTEDFVARMKEETGGKGVD---VILDCLG 681
            ++A+V    G P +V++L+ +E   ++  +V +K+ A  +N +D    +G+Y          G E    +++VG NV+  K GD V     G G     AV + + L  VPS + L+ AA      CT +  +     L PG+S + +  +SG+G   IQ+    G+R      +    +KL+   K LGA+  I   TE+ + R + +   K +    + L+C+G
Sbjct:   43 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---TEEELRRPEMKNFFKDMPQPRLALNCVG 265          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ADH_SULSR (NAD-dependent alcohol dehydrogenase OS=Sulfolobus sp. (strain RC3) GN=adh PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.462e-11
Identity = 67/249 (26.91%), Postives = 107/249 (42.97%), Query Frame = 1
Query:   31 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-NEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILD 672
            M+A+ + + G P  L L++++ P+ K  +VLIKVEA  +  +D   R+G +   +             G E +G I  +G  V  +  GD V             C +           LG    G YAE V  P  + +     ++  +A+       T +  V   S L P ++ +V G   G+GT A+Q+ K  G    +     EE +   K  GAD  I    +D +A ++  T GKGVD ++D
Sbjct:    1 MRAVRLVEIGKP--LVLKDIDIPKPKGAQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEMGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVLNPHYKYMYKLRRLNAVEASPLTCSGITTYRAVRKAS-LDPTKTLVVVGAGGGLGTMAVQIAKAVGGATIIGVDVREEAVETAKRAGADYVINASVQDPLAEIRRITEGKGVDAVID 246          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: PKS7_DICDI (Probable polyketide synthase 7 OS=Dictyostelium discoideum GN=pks7 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.439e-11
Identity = 64/228 (28.07%), Postives = 103/228 (45.18%), Query Frame = 1
Query:   61 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP--GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS--PGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGNEEKLAVCKDLGAD-VCILYKTED--FVARMKEE-----TGGKGVDVILDCLGTSHFQRN 702
            SP +    + +  +++D++V +K  AT +N  D L   GS       +  P  G E SG I  VG NV  +KVGD V   L     +  +      +   PS +S  +A++ P      + ++F    L+    ES L+H GS G G    ++ K +G +  +FVT  ++E      D   D +  +Y   D  +V  +K E     +  KGVD+IL+ L +     N
Sbjct: 1798 SPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFG-LSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSN 2024          
The following BLAST results are available for this feature:
BLAST of DY259953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
PKS29_DICDI6.462e-1126.27Probable polyketide synthase 29 OS=Dictyostelium d... [more]
MECR_HUMAN6.462e-1127.43Trans-2-enoyl-CoA reductase, mitochondrial OS=Homo... [more]
ADH_SULSR6.462e-1126.91NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
PKS7_DICDI8.439e-1128.07Probable polyketide synthase 7 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YM02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259953 ID=DY259953; Name=DY259953; organism=Citrus clementina; type=EST; length=977bp
TTTAATTCTACTCTGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAAC
TCAACCCGGTAGCCCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTC
AAATCAAAGACGACGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAAC
CGGGCCGACACTCTTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGC
CAGCCCTTACCCGGGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTA
AAAACGTCTCTAGATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGT
GGAGGAGGGTATGCTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCC
CGTTCCATCTGGTGTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGG
CTTGCACTGTTTGGTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGG
GAGTCATTTCTGGTTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGAT
TCAGATGGGAAAATGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAATG
AGGAAAAGCTGGCTGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCCTT
TACAAGACTGAGGATTTTGTTGCACGAATGAAGGAAGAAACTGGGGGGAA
AGGTGTTGATGTAATTTTAGATTGCCTGGGAACCTCCCACTTTCAGCGTA
ACCCTCCACAGCCCTGAACATTGATGGGAGGCTTTTCCTAATTGGACCCC
GGGTGGGACCAAAACCGAATTAAATATAACTTCCCCTGTTGCCAAACGCC
CCCTTGTGCAAGCGGTGGGTTCGCGAACCTAAAATAAAAAAAACAAAACT
TTATTTTCCTCGGGGCGGTAAAAAATGTTTGGCCCCCCACTGCCCATGGG
GAACGGGGACCCTCGCCTCCCCCTCTCTCCCCCCCTGCGGAAACCCCCCC
AACTCCCCCCCTCCCGGCGCAGAACCC
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