DY259953

Overview
NameDY259953
Unique NameDY259953
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length977
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: RT4I1_BOVIN (Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.108e-16
Identity = 80/251 (31.87%), Postives = 113/251 (45.02%), Query Frame = 1
Query:    4 NSTLESEGTMKAIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP--------------GLECSGTILSVGKNVSRWKVGDQVCALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP----GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTS 687
            ++T      M A VI + GS EVL+  Q +  P I   +EV+IKV A ++N  D   R G           P              G + SG ++  G +V  +K GD+V A +     G  +E V V   +V   P  ++   AA+ P VA T WS +     L+     G+  L+ G S G+GTFAIQ+ K     V      +    V K LGAD  I YK+ +  A++K     K  D ILD +G S
Sbjct:   34 STTSPRSTVMPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRK-LGADDVIDYKSGNVEAQLK---SSKPFDFILDNVGGS 280          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAR (Zinc-type alcohol dehydrogenase-like protein SAR2277 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2277 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.671e-16
Identity = 64/217 (29.49%), Postives = 103/217 (47.47%), Query Frame = 1
Query:   31 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEE 639
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G NV+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ + +K ED V + KE+
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQ---APRVLGFDAIGTVEAIGPNVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPSENIGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKEK 211          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QORL2_MOUSE (Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.671e-16
Identity = 63/221 (28.51%), Postives = 95/221 (42.99%), Query Frame = 1
Query:   34 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG-KCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTSHF 693
            +A + T+   P  L +QEV    +   EV + V    +N AD L  +G Y         PG+E SG +L  G +VS  K GD+V  +      AE+       +  +P  VSL+DAA  P    T    V   + + PGE+ LV   +   G   I +       +V    G++EK  +    GA   + Y        +K+  G  GV+V +D +G   F
Sbjct:   28 RAALCTELKQP--LTIQEVAPRPVGPQEVRVDVHFCGVNFADILACRGQYQEKPPLPFTPGMEFSGAVLETGTDVSTVKKGDRVIGVSSFHAMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAILAVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFRAKVIAATGSDEKCKLAVQRGAQFSVNYSQGSLRDAVKKLAGSGGVNVAIDMVGGDVF 246          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: PKS18_DICDI (Probable polyketide synthase 18 OS=Dictyostelium discoideum GN=pks18 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.671e-16
Identity = 68/223 (30.49%), Postives = 112/223 (50.22%), Query Frame = 1
Query:  103 IKDDEVLIKVEATALN-----------RADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL--SPGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGNEEKLAVCKDLGAD-VCILYKT------EDFVARMKEETGGK-GVDVILDCLGTSHFQRN 702
            IKDDE+ ++V+AT +N            A+++ R G    P+      G+E SG I  +G N++ +++GDQV   +G    +  V V        P+ +S ++AA+ P V  T   ++F    L  S  ES L+H G+ G+G  A+ + K +G +  VFVT G++EK     D   D +  +Y T      E    ++K+    K GVD+IL+ L + + + N
Sbjct: 1858 IKDDEIEVEVKATGINYKDYLIYCGLVSAESINRYGDVNNPEF-----GIEYSGIISRIGNNITNFEIGDQVYG-MGLDTISTHVIVNPNYCYHKPTNISFQEAASIPCVYLTSLCSIFNIGCLSVSGNESILIHSGTGGVGLSALNILKWKGHKSHVFVTVGSKEKEKYLLDTYGDFITGIYSTRNKNYVEQIKLKLKQLGSNKNGVDLILNTLSSDYMESN 2074          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QOR_LEIAM (Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.713e-16
Identity = 66/204 (32.35%), Postives = 97/204 (47.55%), Query Frame = 1
Query:  100 QIKDDEVLIKVEATALNRADTLQRKGSY----PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTSHF 693
            ++ +  V + V+   +N +D     GSY     PP       G E +GT++ +G  V+  KVGD V  L+  G +AE +  PA + +PVP    LK + +  P  A T    +     +  G+  LV   + G G  A+Q+ K   G  V  T  +EEK    K +G D  I YKTE    R+  E   KGVDV+ +C+G   F
Sbjct:   33 EVPEGMVRVSVKYAGVNASDLNFTNGSYFKNVQPPFDC----GFEAAGTVVQIGAGVANVKVGDHV-VLMQYGCFAEFLDAPAERCIPVPE---LKPEYSVLPVSALTAAVALGEVGRVKKGDVALVTAAAGGTGQIAVQLLKHVYGCTVIGTCSSEEKAEFLKSIGCDHVINYKTESLDGRL-HELCPKGVDVVYECVGGHTF 227          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ZADH2_MOUSE (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.486e-15
Identity = 66/226 (29.20%), Postives = 108/226 (47.79%), Query Frame = 1
Query:   28 TMKAIVITQ--PGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTSHF 693
            TM+ +V+T+  P   E + L+ +   P   D ++L++     +N +D     G Y P        G E  G ++++G + S R+ VG Q  A +  G +AE   VPA   +P+PS     +         T + ++     LS G+  LV   + G G FA+Q+ K     V  T  ++EK A  K +G D  I Y+TE     +K+E   +GVDV+ + +G + F
Sbjct:   32 TMQKLVVTRLSPNFHEAVTLRRDCPVPLPGDGDLLVRNRFVGINASDINYSAGRYDPSLKPPFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIAIPMPS--VKPEYLTMLVSGTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQLSKIAKCHVIGTCSSDEKAAFLKSIGCDRPINYRTEPVETVLKQEY-PEGVDVVYESVGGAMF 253          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAW (Zinc-type alcohol dehydrogenase-like protein MW2112 OS=Staphylococcus aureus (strain MW2) GN=MW2112 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.941e-15
Identity = 63/217 (29.03%), Postives = 103/217 (47.47%), Query Frame = 1
Query:   31 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS------PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEE 639
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G +V+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ + +K ED V + KE+
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQ---APRVLGFDAIGTVEAIGPDVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKEK 211          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAS (Zinc-type alcohol dehydrogenase-like protein SAS2087 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2087 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.941e-15
Identity = 63/217 (29.03%), Postives = 103/217 (47.47%), Query Frame = 1
Query:   31 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS------PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEE 639
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G +V+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ + +K ED V + KE+
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQ---APRVLGFDAIGTVEAIGPDVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKEK 211          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.941e-15
Identity = 65/236 (27.54%), Postives = 105/236 (44.49%), Query Frame = 1
Query:   28 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVC----------ALLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILY-KTEDFVARMKEETGG 648
            T KA++    G    L+ +++  P+ K +E+LI V+ + +   D    KG +P         G E +G ++++G+NV  WKVGD              + C          A L G    G + +     A Q   +P+G  L + A       TV+  +  T+ L  G+   + G + G+G+ A+Q  K  G RV    G E+K    K LGA+  I + K +D V  +K+ T G
Sbjct:    6 TQKAVIFETNGGK--LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWKGDWPLATKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNCAEADLSGYTHDGSFQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKAL-KTAELEAGQWVAISGAAGGLGSLAVQYAKAMGYRVLAIDGGEDKGEFVKSLGAETFIDFTKEKDVVEAVKKATNG 238          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAN (Zinc-type alcohol dehydrogenase-like protein SA1988 OS=Staphylococcus aureus (strain N315) GN=SA1988 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.535e-15
Identity = 63/217 (29.03%), Postives = 103/217 (47.47%), Query Frame = 1
Query:   31 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEE 639
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G +V+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ + +K ED V + KE+
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMKVTQ---APRVLGFDAIGTVEAIGPDVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPSENVGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKEK 211          
The following BLAST results are available for this feature:
BLAST of DY259953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
RT4I1_BOVIN5.108e-1631.87Reticulon-4-interacting protein 1, mitochondrial O... [more]
ZDH1_STAAR6.671e-1629.49Zinc-type alcohol dehydrogenase-like protein SAR22... [more]
QORL2_MOUSE6.671e-1628.51Quinone oxidoreductase-like protein 2 OS=Mus muscu... [more]
PKS18_DICDI6.671e-1630.49Probable polyketide synthase 18 OS=Dictyostelium d... [more]
QOR_LEIAM8.713e-1632.35Probable quinone oxidoreductase OS=Leishmania amaz... [more]
ZADH2_MOUSE1.486e-1529.20Zinc-binding alcohol dehydrogenase domain-containi... [more]
ZDH1_STAAW1.941e-1529.03Zinc-type alcohol dehydrogenase-like protein MW211... [more]
ZDH1_STAAS1.941e-1529.03Zinc-type alcohol dehydrogenase-like protein SAS20... [more]
ADH2_CANAL1.941e-1527.54Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
ZDH1_STAAN2.535e-1529.03Zinc-type alcohol dehydrogenase-like protein SA198... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YM02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259953 ID=DY259953; Name=DY259953; organism=Citrus clementina; type=EST; length=977bp
TTTAATTCTACTCTGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAAC
TCAACCCGGTAGCCCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTC
AAATCAAAGACGACGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAAC
CGGGCCGACACTCTTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGC
CAGCCCTTACCCGGGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTA
AAAACGTCTCTAGATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGT
GGAGGAGGGTATGCTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCC
CGTTCCATCTGGTGTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGG
CTTGCACTGTTTGGTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGG
GAGTCATTTCTGGTTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGAT
TCAGATGGGAAAATGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAATG
AGGAAAAGCTGGCTGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCCTT
TACAAGACTGAGGATTTTGTTGCACGAATGAAGGAAGAAACTGGGGGGAA
AGGTGTTGATGTAATTTTAGATTGCCTGGGAACCTCCCACTTTCAGCGTA
ACCCTCCACAGCCCTGAACATTGATGGGAGGCTTTTCCTAATTGGACCCC
GGGTGGGACCAAAACCGAATTAAATATAACTTCCCCTGTTGCCAAACGCC
CCCTTGTGCAAGCGGTGGGTTCGCGAACCTAAAATAAAAAAAACAAAACT
TTATTTTCCTCGGGGCGGTAAAAAATGTTTGGCCCCCCACTGCCCATGGG
GAACGGGGACCCTCGCCTCCCCCTCTCTCCCCCCCTGCGGAAACCCCCCC
AACTCCCCCCCTCCCGGCGCAGAACCC
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