DY259953

Overview
NameDY259953
Unique NameDY259953
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length977
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAM (Zinc-type alcohol dehydrogenase-like protein SAV2186 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2186 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.535e-15
Identity = 63/217 (29.03%), Postives = 103/217 (47.47%), Query Frame = 1
Query:   31 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEE 639
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G +V+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ + +K ED V + KE+
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMKVTQ---APRVLGFDAIGTVEAIGPDVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPSENVGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKEK 211          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAC (Zinc-type alcohol dehydrogenase-like protein SACOL2177 OS=Staphylococcus aureus (strain COL) GN=SACOL2177 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.535e-15
Identity = 63/216 (29.17%), Postives = 102/216 (47.22%), Query Frame = 1
Query:   31 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKE 636
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G +V+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ + +K ED V + KE
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQ---APRVLGFDAIGTVEAIGPDVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISTNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKE 210          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: YBI2_SCHPO (Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe GN=SPBC16A3.02c PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.535e-15
Identity = 66/251 (26.29%), Postives = 109/251 (43.43%), Query Frame = 1
Query:    4 NSTLESEGTMKAIVITQPGSP-EVLQLQE---VEDP-QIKDDEVLIKVEATALNRAD-------TLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG-------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTSHFQR 699
            + T    GT  A +  + G P +VL L++   + +P ++   +VL++V AT++N  D        +  K  +  P      PG + +G +L+VG  V  +    +V            GG  A  +      V  +P GVS  + A F     T W  +     + PG   ++ G S G+GTFA+ + K     V  T  + E L +CK LGA   + YK ++ V R+ +       D + DC+  +   R
Sbjct:    3 SETKSEFGTKSAWLYNRTGKPKDVLYLEKGLHIPNPAELGPYDVLVEVVATSINPLDYKLMNTYQMIAKALFKLPN----IPGYDFAGRVLAVGSEVKEFSATQRVWGCQSFPRAGRQGGSCATHIVTGDKDVWHLPDGVSFNEGAGFGIAGLTAWEVLVRQMKVKPGTKLVIEGASGGVGTFAVALAKALECEV-TTISSTENLDLCKSLGATHTLDYKKDNLVERLADL---GPYDFVFDCVNDNVLYR 245          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: YOGA_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein yogA OS=Bacillus subtilis GN=yogA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.311e-15
Identity = 67/241 (27.80%), Postives = 104/241 (43.15%), Query Frame = 1
Query:   31 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA-----------------LLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTSHF 693
            MKA++         L +Q+V   +    EV +K+++  LN  D    K      +      G + +G I  +G+ V    V  +V                   +LGG   G  AE V +P+   +  P+ +S ++A   P  A T +  +F    L  GE  L+ G  SG+ T+A+ M K  G  V VT+ +EEK      LGAD        D  +   E+  GK +DV+LD +G + F
Sbjct:    1 MKAVIHNGKAGLLGLSVQDVPSTKPGYGEVKVKLKSAGLNHRDLFLMKNK--SEQDPHMILGSDGAGIIEEIGEGVKNVTVQTEVVIFPTLNWDLTENVPPVPEILGGPSDGTLAEYVIIPSQNAIKKPAYLSWEEAGVLPLSALTAYRALFTKGQLKKGEHLLIPGIGSGVATYALFMAKAIGATVSVTSRSEEKRKKALKLGADYAF-----DSYSNWDEQLQGKKIDVVLDSIGPALF 234          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.311e-15
Identity = 64/244 (26.23%), Postives = 111/244 (45.49%), Query Frame = 1
Query:    4 NSTLESEGTMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVC----------ALLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILY-KTEDFVARMKEETGG 648
            NS+     T K ++  + G    L+ +++  P+ K +E+LI V+ + +   D    KG +P P       G E +G +++ G+NV  +++GD              ++C          A L G    G + +     A Q   +P G  L + A       TV+  +  T+ L PG+   + G + G+G+ A+Q  K  G+RV    G + K  + K  G +V I + K++D VA ++E T G
Sbjct:   25 NSSFAIPETQKGVIFYENGGK--LEYKDLPVPKPKANEILINVKYSGVCHTDLHAWKGDWPLPVKLPLVGGHEGAGIVVAKGENVKNFEIGDYAGIKWLNGSCMSCELCEQGYESNCLQADLSGYTHDGSFQQYATADAVQAAQIPKGTDLAEIAPILCAGVTVYKAL-KTADLKPGQWVAISGAAGGLGSLAVQYAKAMGLRVLGIDGGDGKEELFKQCGGEVFIDFRKSKDMVADIQEATNG 265          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.648e-15
Identity = 64/236 (27.12%), Postives = 97/236 (41.10%), Query Frame = 1
Query:   28 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGYA------EKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYK-TEDFVARMKEETGG 648
            T KA+V    G P  L  +++  P  K +E+LI V+ + +   D    KG +P         G E +G ++ +G NV+ W++GD                        CA     GY       +     A Q   +P G  L  AA       TV+  +  T+ + PG    + G   G+G+ AIQ  K  G RV    G EEK    K LGA+  + +  ++D V  ++  T G
Sbjct:    6 TQKAVVFESNGGP--LLYKDIPVPTPKPNEILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAKADLSGYTHDGSFQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKAL-KTAQIQPGNWVCISGAGGGLGSLAIQYAKAMGFRVIAIDGGEEKGEFVKSLGAEAYVDFTVSKDIVKDIQTATDG 238          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.648e-15
Identity = 64/242 (26.45%), Postives = 108/242 (44.63%), Query Frame = 1
Query:   28 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILY-KTEDFVARMKEETGGKGVDVI 666
            T K ++  + G    LQ +++  P+ K +E+LI V+ + +   D    +G +P         G E +G ++++G+NV+ W++GD              + C L          L G    G + +     A Q   +P  V L + A       TV+  +  ++H+  G+   + G   G+G+ AIQ  K  G RV      +EK  + K+LG +  I + KT+D VA + E T G    VI
Sbjct:    6 TQKGVIFYEHGGE--LQYKDIPVPKPKPNELLINVKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPKADLSGYTHDGSFQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKAL-KSAHIKAGDWVAISGACGGLGSLAIQYAKAMGYRVLGIDAGDEKAKLFKELGGEYFIDFTKTKDMVAEVIEATNGVAHAVI 244          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.648e-15
Identity = 65/236 (27.54%), Postives = 103/236 (43.64%), Query Frame = 1
Query:   28 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVC----------ALLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILY-KTEDFVARMKEETGG 648
            T KA+V    G   V +   V  P  K +E+LI V+ + +   D   RKG +P         G E +G ++ +G+NV  WK+GD              + C          A L G    G + +     A Q   +P+G  L + A       TV+  +  T+ L+ G+   + G   G+G+ A+Q  +  G+RV    G +EK    K LGA+  + + K +D V  +K+ T G
Sbjct:    8 TQKAVVFDTNGGQLVYKDYPVPTP--KPNELLIHVKYSGVCHTDLHARKGDWPLATKLPLVGGHEGAGVVVGMGENVKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNCGEADLSGYTHDGSFEQYATADAVQAAKIPAGTDLANVAPILCAGVTVYKAL-KTADLAAGQWVAISGAGGGLGSLAVQYARAMGLRVVAIDGGDEKGEFVKSLGAEAYVDFTKDKDIVEAVKKATDG 240          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.633e-15
Identity = 64/242 (26.45%), Postives = 107/242 (44.21%), Query Frame = 1
Query:   28 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILY-KTEDFVARMKEETGGKGVDVI 666
            T K ++  + G    LQ +++  P+ K +E+LI V+ + +   D    KG +P P       G E +G ++++G+NV  WK+GD              + C L          L G    G + +     A Q   +P G  L + A       TV+  +  +++L  G+   + G + G+G+ A+Q  K  G RV      EEK  + KDLG +  I + K+++    + E T G    VI
Sbjct:    8 TQKGVIFYENGGE--LQYKDIPVPKPKANELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADLSGYTHDGSFQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKAL-KSANLKAGDWVAISGAAGGLGSLAVQYAKAMGYRVLGIDAGEEKAKLFKDLGGEYFIDFTKSKNIPEEVIEATKGGAHGVI 246          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: PKS44_DICDI (Probable polyketide synthase 44 OS=Dictyostelium discoideum GN=pks44 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.258e-14
Identity = 58/202 (28.71%), Postives = 100/202 (49.50%), Query Frame = 1
Query:   85 EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKG------ASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS--PGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGNEEKLAVCKDLGAD-VCILY--KTEDFVARMKEETGGK 651
            E +   +K++E+ ++V AT +N  D+L  +   PP         + P  G ECSG +  +G  V ++KVGD V  +      +  +      VL  P  +S  +AA+ P V CT + ++F + +LS    ES L+H  S GIG   + + K  G   +++VT G++EK    ++   D +  +Y  +  DF+  +K +   K
Sbjct: 1890 EAKQSNLKENEIEVQVVATGINFKDSLIFRNLVPPVLANHEGDFSKPEFGFECSGIVSRIGSKVKKFKVGDSVLGISWKSTSSHAINYQDAFVLK-PDNISFVEAASIPIVYCTSFYSLFYSGNLSIKNNESVLIHQASGGIGLACLNILKSCGFKSKLYVTVGSKEKEDYLRETYGDFITGIYSSRNTDFLENIKTDLSNK 2090          
The following BLAST results are available for this feature:
BLAST of DY259953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
ZDH1_STAAM2.535e-1529.03Zinc-type alcohol dehydrogenase-like protein SAV21... [more]
ZDH1_STAAC2.535e-1529.17Zinc-type alcohol dehydrogenase-like protein SACOL... [more]
YBI2_SCHPO2.535e-1526.29Zinc-type alcohol dehydrogenase-like protein C16A3... [more]
YOGA_BACSU3.311e-1527.80Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH4_KLULA3.311e-1526.23Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]
ADH1_PICST5.648e-1527.12Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADH1_KLUMA5.648e-1526.45Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH1_CANAL5.648e-1527.54Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]
ADH1_KLULA9.633e-1526.45Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
PKS44_DICDI1.258e-1428.71Probable polyketide synthase 44 OS=Dictyostelium d... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YM02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259953 ID=DY259953; Name=DY259953; organism=Citrus clementina; type=EST; length=977bp
TTTAATTCTACTCTGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAAC
TCAACCCGGTAGCCCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTC
AAATCAAAGACGACGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAAC
CGGGCCGACACTCTTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGC
CAGCCCTTACCCGGGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTA
AAAACGTCTCTAGATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGT
GGAGGAGGGTATGCTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCC
CGTTCCATCTGGTGTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGG
CTTGCACTGTTTGGTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGG
GAGTCATTTCTGGTTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGAT
TCAGATGGGAAAATGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAATG
AGGAAAAGCTGGCTGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCCTT
TACAAGACTGAGGATTTTGTTGCACGAATGAAGGAAGAAACTGGGGGGAA
AGGTGTTGATGTAATTTTAGATTGCCTGGGAACCTCCCACTTTCAGCGTA
ACCCTCCACAGCCCTGAACATTGATGGGAGGCTTTTCCTAATTGGACCCC
GGGTGGGACCAAAACCGAATTAAATATAACTTCCCCTGTTGCCAAACGCC
CCCTTGTGCAAGCGGTGGGTTCGCGAACCTAAAATAAAAAAAACAAAACT
TTATTTTCCTCGGGGCGGTAAAAAATGTTTGGCCCCCCACTGCCCATGGG
GAACGGGGACCCTCGCCTCCCCCTCTCTCCCCCCCTGCGGAAACCCCCCC
AACTCCCCCCCTCCCGGCGCAGAACCC
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