DY259964
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2M1_MOUSE (AP-2 complex subunit mu OS=Mus musculus GN=Ap2m1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.499e-24 Identity = 67/220 (30.45%), Postives = 109/220 (49.55%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGR----------KREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF---WYGTTNDPGILTSFSFNPWGEKAG 621 +++ NFVL+YELLDE++DFGY Q + T LK++ I QG K T +S + ++ G+ +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE + +ND ++I K + D S +G ++ +D+ H+ VRL FD E + P F Y TT D I+ F P + G Sbjct: 100 NIKNNFVLIYELLDEILDFGYPQNSETGALKTF--------------------ITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKD--IILPFRVIPLVREVG 297
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2M1_MACFA (AP-2 complex subunit mu-1 OS=Macaca fascicularis GN=AP2M1 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.499e-24 Identity = 67/220 (30.45%), Postives = 109/220 (49.55%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGR----------KREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF---WYGTTNDPGILTSFSFNPWGEKAG 621 +++ NFVL+YELLDE++DFGY Q + T LK++ I QG K T +S + ++ G+ +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE + +ND ++I K + D S +G ++ +D+ H+ VRL FD E + P F Y TT D I+ F P + G Sbjct: 100 NIKNNFVLIYELLDEILDFGYPQNSETGALKTF--------------------ITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKD--IILPFRVIPLVREVG 297
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2M1_HUMAN (AP-2 complex subunit mu OS=Homo sapiens GN=AP2M1 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.499e-24 Identity = 67/220 (30.45%), Postives = 109/220 (49.55%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGR----------KREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF---WYGTTNDPGILTSFSFNPWGEKAG 621 +++ NFVL+YELLDE++DFGY Q + T LK++ I QG K T +S + ++ G+ +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE + +ND ++I K + D S +G ++ +D+ H+ VRL FD E + P F Y TT D I+ F P + G Sbjct: 100 NIKNNFVLIYELLDEILDFGYPQNSETGALKTF--------------------ITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKD--IILPFRVIPLVREVG 297
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2M1_BOVIN (AP-2 complex subunit mu OS=Bos taurus GN=AP2M1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.499e-24 Identity = 67/220 (30.45%), Postives = 109/220 (49.55%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGR----------KREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF---WYGTTNDPGILTSFSFNPWGEKAG 621 +++ NFVL+YELLDE++DFGY Q + T LK++ I QG K T +S + ++ G+ +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE + +ND ++I K + D S +G ++ +D+ H+ VRL FD E + P F Y TT D I+ F P + G Sbjct: 100 NIKNNFVLIYELLDEILDFGYPQNSETGALKTF--------------------ITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKD--IILPFRVIPLVREVG 297
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP1M_CAEEL (AP-1 complex subunit mu-1-I OS=Caenorhabditis elegans GN=unc-101 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 3.613e-24 Identity = 68/180 (37.78%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGRKRE-EIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLI-GKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFP 534 S+R NFV++YELLDE++DFG+ QTT + +L+ Y+ E Q L A P AVT +V G + R+ E+F+D+IE +++ S++G +L SEI G+++M+ YLTG PE+RL LND +L G GR S +V L+++ H+ VRL FD + + P Sbjct: 102 SVRDNFVVIYELLDEMMDFGFPQTTESRILQEYITQEG--------QKLISAP--------RPPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNMLASANGTVLQSEIVGSVKMRVYLTGMPELRLGLNDKVLFEGSGRGK---------SKSVELEDVKFHQCVRLSRFDTDRTISFIP 256 HSP 2 Score: 24.2534 bits (51), Expect = 3.613e-24 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 513 RTLSLVPPNGEFLVWNYQ 566 RT+S +PP+G F + +Y+ Sbjct: 250 RTISFIPPDGAFELMSYR 267
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2M1_XENLA (AP-2 complex subunit mu-1 OS=Xenopus laevis GN=ap2m1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.795e-24 Identity = 66/220 (30.00%), Postives = 108/220 (49.09%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGR----------KREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF---WYGTTNDPGILTSFSFNPWGEKAG 621 +++ NFVL+YELLDE++DFGY Q + T LK++ I QG K T +S + ++ G+ +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE + +ND ++I K + D TG ++ +D+ H+ VRL FD E + P + Y TT D I+ F P + G Sbjct: 100 NIKNNFVLIYELLDEILDFGYPQNSETGALKTF--------------------ITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETGKTGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEYELMRYRTTKD--IILPFRVIPLVREVG 297
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2M1_CHICK (AP-2 complex subunit mu-1 OS=Gallus gallus GN=AP2M1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 64/210 (30.48%), Postives = 105/210 (50.00%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF---WYGTTNDPGILTSFSFNPWGEKAG 621 +++ NFVL+YELLDE++DFGY Q + T LK+++ + I Q + + Q R G +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE + +ND ++I K + D +G ++ +D+ H+ VRL FD E + P F Y TT D I+ F P + G Sbjct: 100 NIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQTKEEQSQITSQVTGQIGWRREGIKY------------RRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETGKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKD--IILPFRVIPLVREVG 295
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP1M2_HUMAN (AP-1 complex subunit mu-2 OS=Homo sapiens GN=AP1M2 PE=1 SV=4) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 63/184 (34.24%), Postives = 108/184 (58.70%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGR-KREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF 549 S+R NFV+VYELLDE++DFG+ QTT +++L+ Y+ + ++ G R+P T VT +V G + K+ E+F+D+IE +++ +++G +L SEI GTI++K +L+G PE+RL LND R +++ + + +V L+++ H+ VRL FD + + P +F Sbjct: 102 SIRDNFVIVYELLDELMDFGFPQTTDSKILQEYITQQSNKLET--------------GKSRVPPT-VTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLND--------RVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDF 262
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP1M_DICDI (AP-1 complex subunit mu OS=Dictyostelium discoideum GN=apm1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.348e-23 Identity = 61/178 (34.27%), Postives = 101/178 (56.74%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFP 534 S+R NFV++YEL+DE++DFGY Q+T ++L+ Y+ E ++ + PAAI + R G K+ E+F+D++E I++ S++G +L SEI G ++MKS L+G PE+RL LND +L ++ + G G V L+++ H+ VRL F+ + + P Sbjct: 101 SIRDNFVVIYELMDEMMDFGYPQSTEPKILQEYITQEGYKLERGARGMVLPAAITGAVSWRKEGIKYNKN------------EVFLDVVESINLLVSANGTVLRSEIVGAVKMKSKLSGMPELRLGLNDKILFENSAKT----GAPKGKG-VELEDVKFHQCVRLSKFENDRTISFIP 261 HSP 2 Score: 26.5646 bits (57), Expect = 1.348e-23 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 513 RTLSLVPPNGEFLVWNYQ 566 RT+S +PP+GEF + +Y+ Sbjct: 255 RTISFIPPDGEFELMSYR 272
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2M1_PONAB (AP-2 complex subunit mu OS=Pongo abelii GN=AP2M1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.962e-23 Identity = 66/220 (30.00%), Postives = 108/220 (49.09%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGR----------KREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF---WYGTTNDPGILTSFSFNPWGEKAG 621 +++ NFVL+YELLDE++DFGY Q + T LK++ I QG K T +S + ++ G+ +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE + +ND ++I K + D S +G ++ +D+ H+ VRL D E + P F Y TT D I+ F P + G Sbjct: 100 NIKNNFVLIYELLDEILDFGYPQNSETGALKTF--------------------ITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKSDSERSISFIPPDGEFELMRYRTTKD--IILPFRVIPLVREVG 297 The following BLAST results are available for this feature:
BLAST of DY259964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259964 ID=DY259964; Name=DY259964; organism=Citrus clementina; type=EST; length=765bpback to top |