DY259964
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP1M2_MOUSE (AP-1 complex subunit mu-2 OS=Mus musculus GN=Ap1m2 PE=1 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23 Identity = 62/184 (33.70%), Postives = 108/184 (58.70%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGR-KREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF 549 S+R NFV+VY+LLDE++DFG+ QTT +++L+ Y+ + ++ G R+P T VT +V G + K+ E+F+D+IE +++ +++G +L SEI GTI++K +L+G PE+RL LND R +++ + + +V L+++ H+ VRL FD + + P +F Sbjct: 102 SIRDNFVIVYDLLDELMDFGFPQTTDSKILQEYITQQGNKLET--------------GKSRVPPT-VTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLND--------RVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDF 262
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP1M2_BOVIN (AP-1 complex subunit mu-2 OS=Bos taurus GN=AP1M2 PE=1 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 62/184 (33.70%), Postives = 108/184 (58.70%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGR-KREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF 549 S+R NFV+VYELLDE++DFG+ QTT +++L+ Y+ + ++ G R+P T VT +V G + K+ E+F+D+IE +++ +++G +L SEI G+I++K +L+G PE+RL LND R +++ + + +V L+++ H+ VRL FD + + P +F Sbjct: 102 SIRDNFVIVYELLDELMDFGFPQTTDSKILQEYITQQGNKLET--------------GKSRVPPT-VTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGSIKLKVFLSGMPELRLGLND--------RVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDF 262
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2M_DICDI (AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 8.506e-23 Identity = 58/186 (31.18%), Postives = 101/186 (54.30%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVF---NEPIVVDAVRLQPLSPAAIFMQGTK--RMPGTAVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTG---SGAVVLDELNLHESVRLDSFDVEGLCPWFP 534 S+R NFVLVYELLDE++DFGY Q ST+VLK Y+ + +D ++ +S I GT R P KR E+++D++E +++ S+ G IL +++ G + MK +L+G PE + +ND +++ + + + + +G + + +D++ H+ VRL FD + + P Sbjct: 99 SIRNNFVLVYELLDEILDFGYPQNCSTDVLKLYITQGQGKLKSLDKLKQDKISKITIQATGTTPWRTPDIKY------------KRNELYIDVVESVNLLMSAEGNILRADVSGQVMMKCFLSGMPECKFGMNDKVIMDREKSTNGGSAARSGARRANGIEIDDITFHQCVRLGKFDSDRTVSFIP 272 HSP 2 Score: 25.7942 bits (55), Expect = 8.506e-23 Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 513 RTLSLVPPNGEFLVWNYQ 566 RT+S +PP+GEF + Y+ Sbjct: 266 RTVSFIPPDGEFELMRYR 283
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2MA_DANRE (AP-2 complex subunit mu-1-A OS=Danio rerio GN=ap2m1a PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.618e-23 Identity = 66/221 (29.86%), Postives = 109/221 (49.32%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGR----------KREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGK-GRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF---WYGTTNDPGILTSFSFNPWGEKAG 621 +++ NFVL+YELLDE++DFGY Q + T LK++ I QG K T +S + ++ G+ +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE + +ND ++I K G+ D +G ++ +D+ H+ VRL FD E + P + Y TT D I+ F P + G Sbjct: 100 NIKNNFVLIYELLDEILDFGYPQNSETGALKTF--------------------ITQQGIKGQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIDKQGKGGTTDDAGKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEYELMRYRTTKD--IILPFRVIPLVREVG 298
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2MB_DANRE (AP-2 complex subunit mu-1-B OS=Danio rerio GN=ap2m1b PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.126e-22 Identity = 64/212 (30.19%), Postives = 109/212 (51.42%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGR-KREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGK-GRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF---WYGTTNDPGILTSFSFNPWGEKAG 621 +++ NFVL+YELLDE++DFGY Q + T LK+++ + I + + S + VT + G + +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE + +ND ++I K G+ D +G ++ +D+ H+ VRL FD E + P + Y TT D I+ F P + G Sbjct: 100 NIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHLTKEEQSQIT-----------SQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIDKQGKGGTTDDTGKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEYELMRYRTTKD--IILPFRVIPLVREVG 298
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP1M1_SCHPO (AP-1 complex subunit mu-1 OS=Schizosaccharomyces pombe GN=apm1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.129e-22 Identity = 59/179 (32.96%), Postives = 97/179 (54.19%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGRKRE-EIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFP 534 S+R NFVLVYELLDE++DFG+ QTT T++L+ Y+ V P+ A+T ++ G R+ E+F+D+IE +++ ++ G ++ SEI G +++K YL+G PE+RL LND +L R+I V ++++ H+ VRL F+ + + P Sbjct: 102 SIRDNFVLVYELLDEIMDFGFPQTTETKILQEYITQTSNTVKKHAPPPI----------------AMTNAISWRSEGIHYRKNEVFLDVIESVNLIAAADGTVIQSEILGKVRLKCYLSGMPELRLGLNDKVLFEAAGRTI-------KGNTVEMEDVKFHQCVRLARFENDRTISFIP 257 HSP 2 Score: 26.1794 bits (56), Expect = 4.129e-22 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 513 RTLSLVPPNGEFLVWNYQ 566 RT+S +PP+GEF + +Y+ Sbjct: 251 RTISFIPPDGEFDLMSYR 268
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2M_CAEEL (AP-2 complex subunit mu OS=Caenorhabditis elegans GN=dpy-23 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 8.066e-21 Identity = 57/194 (29.38%), Postives = 99/194 (51.03%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPI-VVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFPRTVNF---WYGTTND 570 +++ NFVL+YELLDE++DFGY Q T VLK+++ + + DA P + + ++ + E +R E+F+D+IE +++ + G +L++ + G + MKSYL+G PE + +ND + I + D + AV +D+ H+ V+L F+ E + P + Y TT D Sbjct: 100 NVKNNFVLIYELLDEILDFGYPQNTDPGVLKTFITQQGVRTADA-------PVPVTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVIEYVNLLMNQQGQVLSAHVAGKVAMKSYLSGMPECKFGINDKITIEGKSKPGSDDPNKASRAAVAIDDCQFHQCVKLTKFETEHAISFIPPDGEYELMRYRTTKD 286
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP1M1_YEAST (AP-1 complex subunit mu-1-I OS=Saccharomyces cerevisiae GN=APM1 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.514e-17 Identity = 62/203 (30.54%), Postives = 100/203 (49.26%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPG-GRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLIGK----------------GRRSIYDYRSSTGSGA--------VVLDELNLHESVRLDSFDVEGLCPWFP 534 S+R NFV++YELLDEV+D+G Q T T++LK Y+ + L +A + R P A+T SV G K+ E F+DI+E I++ + G +L SEI G +++ S L+G P+++L +ND + K + D + S S + + L++L H+ VRL F+ E + + P Sbjct: 103 SIRDNFVIIYELLDEVMDYGIPQITETKMLKQYITQKSF--------KLVKSAKKKRNATRPP-VALTNSVSWRPEGITHKKNEAFLDIVESINMLMTQKGQVLRSEIIGDVKVNSKLSGMPDLKLGINDKGIFSKYLDDDTNIPSASATTSDNNTETDKKPSITSSSATNKKKVNIELEDLKFHQCVRLSKFENEKIITFIP 296 HSP 2 Score: 21.9422 bits (45), Expect = 1.514e-17 Identity = 6/18 (33.33%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 513 RTLSLVPPNGEFLVWNYQ 566 + ++ +PP+G+F + NY+ Sbjct: 290 KIITFIPPDGKFDLMNYR 307
BLAST of DY259964 vs. ExPASy Swiss-Prot
Match: AP2M_SCHPO (AP-2 complex subunit mu OS=Schizosaccharomyces pombe GN=apm4 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.740e-15 Identity = 54/187 (28.88%), Postives = 98/187 (52.41%), Query Frame = 1 Query: 1 SLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVV--DAVRLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGGRKREE-IFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLLI------GKGRRSIYDYRSSTGSGAVVLDELNLHESVRLDSFDVEGLCPWFP 534 +++ N ++ELLDE+ID+G +QTT + L V + +A+ L+ + + + +PG SV G + R+ I++DI+E++++ SS+G +L S++ G ++M++ L+G PE + LND L K + + SS G V+L++ H+ VRL F+ E + P Sbjct: 99 TVKDNVSFIFELLDEMIDYGIIQTTEPDALARSVSITAVKKKGNALSLKRSHSSQLAHTTSSEIPG-----SVPWRRAGIKYRKNSIYIDIVERMNLLISSTGNVLRSDVSGVVKMRAMLSGMPECQFGLNDKLDFKLKQSESKSKSNNSRNPSSVNGGFVILEDCQFHQCVRLPEFENEHRITFIP 280 The following BLAST results are available for this feature:
BLAST of DY259964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259964 ID=DY259964; Name=DY259964; organism=Citrus clementina; type=EST; length=765bpback to top |