DY259966
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259966 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 3.146e-40 Identity = 87/200 (43.50%), Postives = 122/200 (61.00%), Query Frame = 2 Query: 116 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAESDFKSEPQTIKINQPNTGASGAPAAQKSACC 715 + KLL+IG+S VGK+ L R K++T+ + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN IL GNK DM E +R V T +GQ L ++ G +FFETSAK N+NV++ F + I +++ES +++P Q P Q + C Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDM-EDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSES-LETDPAITAAKQSTRLKETPPPPQPNCGC 227
BLAST of DY259966 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 3.146e-40 Identity = 87/200 (43.50%), Postives = 122/200 (61.00%), Query Frame = 2 Query: 116 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAESDFKSEPQTIKINQPNTGASGAPAAQKSACC 715 + KLL+IG+S VGK+ L R K++T+ + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN IL GNK DM E +R V T +GQ L ++ G +FFETSAK N+NV++ F + I +++ES +++P Q P Q + C Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDM-EDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSES-LETDPAITAAKQSTRLKETPPPPQPNCGC 227
BLAST of DY259966 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 7.009e-40 Identity = 91/204 (44.61%), Postives = 124/204 (60.78%), Query Frame = 2 Query: 116 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDI----KQRLAESDFKSEPQTIKINQPNTGASGAPAAQKSACC 715 L KLL+IGDSGVGKS LLLR KIRT+E++G+++KLQIWDTAGQERFRTIT+ YYRG G+++VYDVT SF N++ W+ I Q+ D+V +ILVGNK D D ++ V T A + GI+ FETSAK N+NVEE+F I + + K LA+ + + +K+ + + +K CC Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKND-DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTK--------NSKRKKRCC 201
BLAST of DY259966 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 7.009e-40 Identity = 91/204 (44.61%), Postives = 124/204 (60.78%), Query Frame = 2 Query: 116 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDI----KQRLAESDFKSEPQTIKINQPNTGASGAPAAQKSACC 715 L KLL+IGDSGVGKS LLLR KIRT+E++G+++KLQIWDTAGQERFRTIT+ YYRG G+++VYDVT SF N++ W+ I Q+ D+V +ILVGNK D D ++ V T A + GI+ FETSAK N+NVEE+F I + + K LA+ + + +K+ + + +K CC Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKND-DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTK--------NSKRKKRCC 201
BLAST of DY259966 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 7.009e-40 Identity = 91/204 (44.61%), Postives = 124/204 (60.78%), Query Frame = 2 Query: 116 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDI----KQRLAESDFKSEPQTIKINQPNTGASGAPAAQKSACC 715 L KLL+IGDSGVGKS LLLR KIRT+E++G+++KLQIWDTAGQERFRTIT+ YYRG G+++VYDVT SF N++ W+ I Q+ D+V +ILVGNK D D ++ V T A + GI+ FETSAK N+NVEE+F I + + K LA+ + + +K+ + + +K CC Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKND-DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTK--------NSKRKKRCC 201
BLAST of DY259966 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.664e-39 Identity = 89/200 (44.50%), Postives = 120/200 (60.00%), Query Frame = 2 Query: 116 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAES-DFKSEPQTIKINQPNTGASGAPAAQKSAC 712 + KLLLIG+S VGK+ L R K++T+ KRIKLQIWDTAGQER+RTITTAYYRGAMG LL+YD+ ++ SF +++W I+ ++ DN ILVGNK D+ E +R VP G+ LAD+ G +FFE SAK N+NV++VF + I ++ ES + S P + N P Q S+C Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDL-EDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGS---NGKGPALGDTPPPQPSSC 217
BLAST of DY259966 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.664e-39 Identity = 88/205 (42.93%), Postives = 122/205 (59.51%), Query Frame = 2 Query: 116 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAES--DFKSEPQTIKINQP---NTGASGAPAAQKSACC 715 L K ++IGD+GVGKSCLLL+ R I +D K IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T +FN++ +W+ + QHA+ N+ +LVGNK D+ +RAV +G+ A E+G+ F E SAKT NVEE F A I +++ + D +E IK+ +G +G+ ++Q CC Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSH-RRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNESYGIKVGYAIPGQSGGAGSSSSQGGGCC 209
BLAST of DY259966 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.934e-39 Identity = 89/204 (43.63%), Postives = 120/204 (58.82%), Query Frame = 2 Query: 116 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAES--DFKSEPQTIKINQPNTGASG--APAAQKSACC 715 L K ++IGD+GVGKSCLLL+ R I +D K IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T +FN++ +W+ + QHA+ N+ +LVGNK D+ +RAV +G+ A E+G+ F E SAKT NVEE F A I +++ + D +E IK+ G SG ++Q CC Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSH-RRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNESYGIKVGYVVPGQSGGAGSSSQGGGCC 208
BLAST of DY259966 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.012e-38 Identity = 82/183 (44.81%), Postives = 122/183 (66.67%), Query Frame = 2 Query: 116 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAESDFKSEPQTIKIN 661 L K+++IGDSG GKS LLLR KI+T+++D IKLQIWDTAGQERFRTIT+ YYRGA GI+ VYDVT++ SF++I W+++I+++A+ NV K+L+GNK D+ ES R V + + +A++ + + E SAKT+ NVE+ F +IAK +K ++ + + T+ +N Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAES-RVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPSNAPASTVSLN 188
BLAST of DY259966 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 2.945e-38 Identity = 79/165 (47.88%), Postives = 114/165 (69.09%), Query Frame = 2 Query: 122 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQR 613 K++L+GDSGVGK+C L++ + + + +DG R+KLQIWDTAGQERFR++T AYYR A +LL+YD+T++SSF+NIR W+ I ++A +V +L+GNKAD+ S+R + + G+ LA EYG+ F ETSAKT +NVE F +IAK++K R Sbjct: 31 KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADV-SSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYR 194 The following BLAST results are available for this feature:
BLAST of DY259966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259966 ID=DY259966; Name=DY259966; organism=Citrus clementina; type=EST; length=1019bpback to top |