DY259971

Overview
NameDY259971
Unique NameDY259971
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length920
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA1_ALNGL (Glutamine synthetase OS=Alnus glutinosa GN=GLN1 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.161e-75
Identity = 137/182 (75.27%), Postives = 148/182 (81.32%), Query Frame = 2 
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            IE  YTLLQKD+ WPL                   ADKA GRDIV++HYKACLYAGINISGINGEVMPGQWEFQVGP VGIS+GD++W ARYILERITEIAGVVLS DPKPI+GDWNGAGAH NYSTKSMRN+GG ++I KAIEKLG R  EHIAAYGEGNERRLTGRHE ADINTF WGV+
Sbjct:  128 IEQEYTLLQKDVKWPLGWPVGGYPGPQGPYYCGIGADKAWGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEVWAARYILERITEIAGVVLSLDPKPIQGDWNGAGAHTNYSTKSMRNNGGYEIIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFKWGVA 309
[Close]
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA3_LUPAN (Glutamine synthetase nodule isozyme (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.517e-75
Identity = 137/182 (75.27%), Postives = 149/182 (81.87%), Query Frame = 2 
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            IE  YTLLQKDI+WP+                   A+KA GRDIV+SHYKACLYAGINISGIN EVMPGQWEFQVGP +GIS+GD+LW+ARYILERITEIAGVVLS DPKPI GDWNGAGAH NYSTKSMRNDGG +VI +AIEKL KR  EHIAAYGEGNERRLTGRHE ADI+TFSWGV+
Sbjct:  128 IEQEYTLLQKDIHWPIGMALGGFPGPQGPYYCGTGAEKAFGRDIVDSHYKACLYAGINISGINAEVMPGQWEFQVGPSIGISAGDELWVARYILERITEIAGVVLSLDPKPIPGDWNGAGAHTNYSTKSMRNDGGYEVIKQAIEKLEKRHNEHIAAYGEGNERRLTGRHETADISTFSWGVA 309
[Close]
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA3_PEA (Glutamine synthetase root isozyme A OS=Pisum sativum GN=GS3A PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.587e-75
Identity = 137/182 (75.27%), Postives = 149/182 (81.87%), Query Frame = 2 
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            IE  YTLLQKDINWPL                   ADKA GRDIV++HYKACL+AGINISGINGEVMPGQWEFQVGP VGIS+GD++W ARYILERITEIAGVV+SFDPKPI GDWNGAGAHAN+STKSMR +GG +VI KAIEKLG R  EHIAAYGEGNERRLTG+HE ADIN FSWGV+
Sbjct:  128 IEQEYTLLQKDINWPLGWPIGGYPGKQGPYYCGIGADKAYGRDIVDAHYKACLFAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWAARYILERITEIAGVVVSFDPKPIPGDWNGAGAHANFSTKSMRENGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETADINVFSWGVA 309
[Close]
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA5_MAIZE (Glutamine synthetase root isozyme 5 OS=Zea mays GN=GS1-5 PE=2 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 3.379e-75
Identity = 134/182 (73.63%), Postives = 149/182 (81.87%), Query Frame = 2 
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            IE  YTLLQKD++WPL                   ADKA GRD+V++HYKACLYAGINISGINGEVMPGQWEFQVGP VGIS+GD++W+ARYILERITE+AG+VLS DPKPIKGDWNGAGAH NYSTKSMR  GG +VI +AIEKLG+R  EHIAAYGEGNERRLTGRHE ADINTF WGV+
Sbjct:  128 IEQEYTLLQKDLSWPLGWPVGGYPGPQGPYYCAAGADKAFGRDVVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEMAGIVLSLDPKPIKGDWNGAGAHTNYSTKSMREAGGYEVIKEAIEKLGRRHREHIAAYGEGNERRLTGRHETADINTFKWGVA 309
[Close]
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA2_PHAVU (Glutamine synthetase PR-2 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.379e-75
Identity = 135/182 (74.18%), Postives = 149/182 (81.87%), Query Frame = 2 
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            IE  YTLLQKD+NWPL                   ADKA GRDIV++HYKAC+YAGINISGINGEVMPGQWEFQVGP VGIS+GD++W ARYILERITE+AG V+SFDPKPI GDWNGAGAH+NYSTKSMR +GG +VI KAIEKLG R  EHIAAYG+GNERRLTGRHE ADINTFSWGV+
Sbjct:  128 IEQEYTLLQKDVNWPLGWPLGGYPGPQGPYYCGVGADKAYGRDIVDAHYKACVYAGINISGINGEVMPGQWEFQVGPSVGISAGDEVWAARYILERITELAGAVVSFDPKPIPGDWNGAGAHSNYSTKSMREEGGYEVIKKAIEKLGLRHKEHIAAYGKGNERRLTGRHETADINTFSWGVA 309
[Close]
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA1_SOYBN (Glutamine synthetase cytosolic isozyme 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.379e-75
Identity = 136/182 (74.73%), Postives = 147/182 (80.77%), Query Frame = 2 
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            IE  YTLLQKDI WPL                   ADKA GRDIV++HYKAC+YAGINISGINGEVMPGQWEFQVGP VGIS+GD++W ARYILERITEIAGVV+SFDPKPI GDWNGAGAH NYSTKSMR DGG +VI  AI+KLGK+  EHIAAYGEGNERRLTGRHE ADINTF WGV+
Sbjct:  127 IEQEYTLLQKDIQWPLGWPVGGFPGPQGPYYCGVGADKAFGRDIVDAHYKACIYAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWAARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMREDGGYEVIKAAIDKLGKKHKEHIAAYGEGNERRLTGRHETADINTFLWGVA 308
[Close]
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA1_MAIZE (Glutamine synthetase root isozyme 1 OS=Zea mays GN=GLN6 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.413e-75
Identity = 134/182 (73.63%), Postives = 148/182 (81.32%), Query Frame = 2 
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            IE  YTLLQKD++WPL                   ADKA GRD+V++HYKACLYAGINISGINGEVMPGQWEFQVGP VGIS+GD++W+ARYILERITE+AG+VLS DPKPIKGDWNGAGAH NYSTKSMR  GG +VI  AI+KLGKR  EHIAAYGEGNERRLTGRHE ADINTF WGV+
Sbjct:  128 IEQEYTLLQKDVSWPLGWPVGGYPGPQGPYYCAAGADKAFGRDVVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEMAGIVLSLDPKPIKGDWNGAGAHTNYSTKSMREAGGYEVIKAAIDKLGKRHKEHIAAYGEGNERRLTGRHETADINTFKWGVA 309
[Close]
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA4_PEA (Glutamine synthetase root isozyme B OS=Pisum sativum GN=GS3B PE=3 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.764e-75
Identity = 136/182 (74.73%), Postives = 149/182 (81.87%), Query Frame = 2 
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            IE  YTLLQKDINWPL                   ADKA GRDIV++HYKACL+AGINISGINGEVMPGQWEFQVGP VGIS+GD++W ARYILERITEI+GVV+SFDPKPI GDWNGAGAHAN+STKSMR +GG +VI KAIEKLG R  EHIAAYGEGNERRLTG+HE ADIN FSWGV+
Sbjct:  128 IEQEYTLLQKDINWPLGWPIGGYPGKQGPYYCGIGADKAYGRDIVDAHYKACLFAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWAARYILERITEISGVVVSFDPKPIPGDWNGAGAHANFSTKSMRENGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETADINVFSWGVA 309
[Close]
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA2_SOYBN (Glutamine synthetase cytosolic isozyme 2 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.764e-75
Identity = 135/182 (74.18%), Postives = 148/182 (81.32%), Query Frame = 2 
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            +E  YTLLQKD+ WPL                   A+KA GRDIV+SHYKAC+YAGINISGINGEVMPGQWEFQVGP +GIS+ D+LW+ARYILERITEIAGVVLSFDPKPI+GDWNGAGAH NYSTKSMRNDGG +VI KAI KL KR  EHIAAYGEGNERRLTGRHE AD+NTF WGV+
Sbjct:  128 LEQEYTLLQKDVQWPLGWPLGGFPGPQGPYYCGTGANKAFGRDIVDSHYKACIYAGINISGINGEVMPGQWEFQVGPSIGISAADELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYSTKSMRNDGGYEVIKKAIAKLEKRHKEHIAAYGEGNERRLTGRHETADMNTFVWGVA 309
[Close]
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA3_PHAVU (Glutamine synthetase N-1 OS=Phaseolus vulgaris GN=Gln-gamma PE=2 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 7.527e-75
Identity = 136/182 (74.73%), Postives = 148/182 (81.32%), Query Frame = 2 
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            IE  YTLLQKD+ WP+                   A+KA GRDIV+SHYKACLYAGINISGINGEVMPGQWEFQVGP VGIS+ D+LW+ARYILERITEIAGVVLSFDPKPI+GDWNGAGAH NYSTKSMRNDGG +VI KAI KL KR  EHIAAYGEGNERRLTG+HE AD+NTF WGV+
Sbjct:  128 IEQEYTLLQKDVQWPVGWPLGGFPGPQGPYYCGIGANKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAADELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYSTKSMRNDGGYEVIKKAITKLEKRHKEHIAAYGEGNERRLTGKHETADMNTFIWGVA 309
The following BLAST results are available for this feature:
BLAST of DY259971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA1_ALNGL1.161e-7575.27Glutamine synthetase OS=Alnus glutinosa GN=GLN1 PE... [more]
GLNA3_LUPAN1.517e-7575.27Glutamine synthetase nodule isozyme (Fragment) OS=... [more]
GLNA3_PEA2.587e-7575.27Glutamine synthetase root isozyme A OS=Pisum sativ... [more]
GLNA5_MAIZE3.379e-7573.63Glutamine synthetase root isozyme 5 OS=Zea mays GN... [more]
GLNA2_PHAVU3.379e-7574.18Glutamine synthetase PR-2 OS=Phaseolus vulgaris PE... [more]
GLNA1_SOYBN3.379e-7574.73Glutamine synthetase cytosolic isozyme 1 OS=Glycin... [more]
GLNA1_MAIZE4.413e-7573.63Glutamine synthetase root isozyme 1 OS=Zea mays GN... [more]
GLNA4_PEA5.764e-7574.73Glutamine synthetase root isozyme B OS=Pisum sativ... [more]
GLNA2_SOYBN5.764e-7574.18Glutamine synthetase cytosolic isozyme 2 OS=Glycin... [more]
GLNA3_PHAVU7.527e-7574.73Glutamine synthetase N-1 OS=Phaseolus vulgaris GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YM23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259971 ID=DY259971; Name=DY259971; organism=Citrus clementina; type=EST; length=920bp
CATTGAGCCCCTCTACACTCTTCTTCAAAAAGACATAAACTGGCCCTTGG
GGTGGCCAGTTGGCGGCTATCCTGGCCCTCAGGGACCTTACTACTGCGGT
GTTGGCGCTGATAAGGCTTTAGGCCGAGACATTGTGAATTCTCACTACAA
AGCTTGCCTTTACGCTGGAATTAACATCAGTGGCATTAACGGTGAAGTTA
TGCCGGGTCAGTGGGAATTCCAAGTGGGTCCCTGTGTGGGTATCTCTTCT
GGTGATCAGTTATGGATGGCTCGGTACATACTCGAGAGGATTACTGAAAT
TGCCGGAGTTGTTCTTTCATTTGATCCAAAACCAATCAAGGGTGACTGGA
ATGGTGCTGGTGCACACGCCAACTACAGCACCAAGTCTATGAGGAATGAT
GGTGGAATTGATGTGATCAACAAGGCAATTGAAAAGTTGGGGAAACGCCC
CGGGGAACACATTGCTGCTTATGGAGAGGGCAACGAAAGAAGACTGACTG
GTCGACATGAAATTGCAGATATCAACACTTTCTCTTGGGGTGTTTCCTAA
TAAAGGTGCCTCCATTCACGTTTGGCCTTGACACCGCCAAAGATGGAAAA
GGAATACTCTTTAAGAACAACGGCCCCCCTTATACACAAACCCATTTGCT
GTGAATTTCTATAATCCTTAACACCTTCTTACTGCGGTACCCATTACATA
AAACGGTGATCTGTTACAAAGATACAAAAACACAGTAAATGGTAACTCTC
TATATCACCCCACTCACTAACAGATCCCACGTCTCCAACTATAACCGAAT
CCTTACGCAAATGCTACAATTAAATTCACTACGTTTAATTTTATATCTCC
TATCTTATCACTATTACCTAACTTACCCCTCCTCGTCCTCCAATCCCCAA
ACCTATTTACCCCTTCCCGG
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