DY259971

Overview
NameDY259971
Unique NameDY259971
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length920
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_EMENI (Glutamine synthetase OS=Emericella nidulans GN=glnA PE=3 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.527e-51
Identity = 100/182 (54.95%), Postives = 118/182 (64.84%), Query Frame = 2
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            +E  YTLL  D  WP                      K   RDIV +HY+ACLYAG+ ISGIN EVMP QWE+QVGPC GI  GD LW++R++L R+ E  GV +SFDPKPIKGDWNGAG H N ST S R +GGI  I   ++KL  R  EHIA YGEGNE RLTGRHE  +I+ FS+GV+
Sbjct:  118 LEQEYTLLGPD-GWPYGWPKGGFPGAQGPYYCGVGTGKVYCRDIVEAHYRACLYAGVKISGINAEVMPSQWEYQVGPCHGIEMGDHLWISRFLLHRVAEEFGVKISFDPKPIKGDWNGAGLHTNVSTTSTRAEGGIKAIESYMKKLEARHVEHIAVYGEGNEERLTGRHETGNIDKFSYGVA 298          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_KLULA (Glutamine synthetase OS=Kluyveromyces lactis GN=GLN1 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.995e-51
Identity = 94/147 (63.95%), Postives = 109/147 (74.15%), Query Frame = 2
Query:  107 ADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            A K   RD++ +HY+ACLYAG+NISGIN EVMP QWEFQVGPC GI+  DQLW+ARY L R+ E  GV +S  PKP+KGDWNGAG H N STK MR  GG+  I  AIEKL KR  EHI  YG  NE+RLTGRHE A ++TFS GV+
Sbjct:  166 AGKVFARDVIEAHYRACLYAGVNISGINAEVMPSQWEFQVGPCEGIAMADQLWIARYFLHRVAEEFGVKVSLHPKPLKGDWNGAGCHTNVSTKLMRAPGGMKYIEDAIEKLSKRHNEHIKLYGADNEQRLTGRHETASMSTFSSGVA 312          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_COLGL (Glutamine synthetase OS=Colletotrichum gloeosporioides GN=GLN1 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.403e-51
Identity = 94/145 (64.83%), Postives = 112/145 (77.24%), Query Frame = 2
Query:  113 KALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            K + RDIV++HYKACLY+G+ ISG N EVMP QWEFQVGPCVGI  GD LW+AR++L RI E  G  +S DPKPI GDWNGAG H+N+STK MR +GG+  I  AI+KL  R  EHIA YGEGNE+RLTGRHE   I+ FS+GV+
Sbjct:  168 KVVQRDIVDAHYKACLYSGVKISGTNAEVMPAQWEFQVGPCVGIEMGDHLWLARFLLARIAEEFGAKVSVDPKPIPGDWNGAGLHSNFSTKEMRVEGGMKHIEAAIKKLEGRHKEHIAVYGEGNEKRLTGRHETGAIDQFSYGVA 312          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_YARLI (Glutamine synthetase OS=Yarrowia lipolytica GN=GLN1 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.444e-51
Identity = 92/145 (63.45%), Postives = 109/145 (75.17%), Query Frame = 2
Query:  113 KALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            K   RD+V +HY+ACLY+GINISGIN EVMP QWE+QVGPC GIS  D+LWM+RY+L R+ E  G+ +SF PKP++GDWNGAG H N STKSMR  GG+  I  AIEKL  R  EHIA YGE N+ RLTGRHE   I +FS GV+
Sbjct:  157 KVFARDVVEAHYRACLYSGINISGINAEVMPSQWEYQVGPCEGISMADELWMSRYLLHRVAEEFGIKISFHPKPLQGDWNGAGCHTNVSTKSMREPGGMKHIEAAIEKLAARHKEHIAVYGEDNDMRLTGRHETGSIGSFSSGVA 301          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_NEUCR (Glutamine synthetase OS=Neurospora crassa GN=gln-1 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.444e-51
Identity = 90/145 (62.07%), Postives = 112/145 (77.24%), Query Frame = 2
Query:  113 KALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            K + RDIV +HYK CLYAG+ ISG N EVMP QWEFQVGPC GI  GD LW+AR++L R++E  G  +SFDPKPI GDWNGAG H N+ST++MR +GG+  I  AI+KL  R  EHIA YGEGN++RLTGRHE   I++F++GV+
Sbjct:  170 KVVQRDIVEAHYKCCLYAGVKISGTNAEVMPAQWEFQVGPCDGIEMGDHLWLARFLLHRVSEEFGAKVSFDPKPIPGDWNGAGLHTNFSTENMRKEGGMKYIEDAIKKLEARHKEHIAVYGEGNDKRLTGRHETGSIDSFTYGVA 314          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_FUSSH (Glutamine synthetase OS=Fusarium solani subsp. phaseoli GN=GLN1 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.580e-51
Identity = 100/182 (54.95%), Postives = 120/182 (65.93%), Query Frame = 2
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            +E  YTLL  D N P                      K + RDIV +HYKACLYAGI ISG N EVMP QWE+QVGPC+GI  GDQLW++R+ L RITE  G  +S  PKPI GDWNGAG H+N+STK+MR +GG+ VI +A++KL     E IA YGE NE RLTGRHE   I++FSWGV+
Sbjct:  132 LEQEYTLLGPD-NRPYGWPTGGFPAPQGEYYCGVGTGKVVQRDIVEAHYKACLYAGIQISGTNAEVMPAQWEYQVGPCLGIEMGDQLWVSRFFLARITEEFGAKVSLHPKPIAGDWNGAGLHSNFSTKAMREEGGMKVIEEALKKLEPHHAECIAEYGEDNELRLTGRHETGSIDSFSWGVA 312          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_SCHPO (Glutamine synthetase OS=Schizosaccharomyces pombe GN=gln1 PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 9.900e-51
Identity = 92/145 (63.45%), Postives = 107/145 (73.79%), Query Frame = 2
Query:  113 KALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            +   RDIV +HYKACLYAGINISGIN EVMP QWE+QVGPC GI  GDQLWM+R++L RI E  GV +SF PKPI GDWNGAG H N STK  R +GGI  I   +EK  KR  EHIA YG+ N+ RLTGRHE   I+ F++GV+
Sbjct:  170 RVFARDIVEAHYKACLYAGINISGINAEVMPSQWEYQVGPCAGIEMGDQLWMSRFLLHRIAEDFGVKISFHPKPILGDWNGAGCHTNVSTKDTRAEGGIKAIESYLEKFAKRHKEHIAVYGDDNDLRLTGRHETGSIDKFTYGVA 314          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_ASHGO (Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.900e-51
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 2
Query:  107 ADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            A K   RD+V +HY+ACLYAG+ ISGIN EVMP QWEFQVGPC GI+ GD+LW+ RY+L R+ E  GV +SF PKP+KGDWNGAG H N ST+ MR  GG+  I +AI+KL KR  EHI  YG  NE RLTGRHE A + TFS GV+
Sbjct:  163 AGKVYARDVVEAHYRACLYAGLRISGINAEVMPSQWEFQVGPCTGITMGDELWVGRYLLHRVAEEFGVKVSFHPKPLKGDWNGAGCHTNVSTREMRQPGGMRYIEEAIDKLSKRHKEHIKLYGSDNELRLTGRHETASMATFSSGVA 309          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA1_CHLRE (Glutamine synthetase cytosolic isozyme OS=Chlamydomonas reinhardtii GN=GLN1 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.689e-50
Identity = 96/183 (52.46%), Postives = 118/183 (64.48%), Query Frame = 2
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRN-DGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            IE  YTLL     WPL                   A  A+GRD+   HY+ CL AG+NISG+N EV+P QWE+QVGPC GI+ GD +WM+RYI+ R+ E+  V +SFDPKPI GDWNG+G H NYSTK+ R    G  VI +   KL  R   HIAAYGEGNERRLTG+HE + ++ FSWGV+
Sbjct:  155 IEQEYTLLNAITKWPLGWPKGGYPAPQGPYYCSAGAGVAIGRDVAEVHYRLCLAAGVNISGVNAEVLPSQWEYQVGPCEGITMGDHMWMSRYIMYRVCEMFNVEVSFDPKPIPGDWNGSGGHTNYSTKATRTAPDGWKVIQEHCAKLEARHAVHIAAYGEGNERRLTGKHETSSMSDFSWGVA 337          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_CHICK (Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.205e-50
Identity = 96/151 (63.58%), Postives = 112/151 (74.17%), Query Frame = 2
Query:  107 ADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAY----GEGNERRLTGRHEIADINTFSWGVS 547
            ADKA GRDIV +HY+ACLYAG+ I G N EVMP QWEFQVGPC GI  GD LW+AR+IL R+ E  GV++SFDPKPI G+WNGAG H N+STK+MR DGG+  I +AIEKL KR   HI AY    G  N RRLTG HE + I+ FS GV+
Sbjct:  167 ADKAYGRDIVEAHYRACLYAGVKIGGTNAEVMPAQWEFQVGPCEGIEMGDHLWIARFILHRVCEDFGVIVSFDPKPIPGNWNGAGCHTNFSTKNMREDGGLKHIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSSIHEFSAGVA 317          
The following BLAST results are available for this feature:
BLAST of DY259971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_EMENI1.527e-5154.95Glutamine synthetase OS=Emericella nidulans GN=gln... [more]
GLNA_KLULA1.995e-5163.95Glutamine synthetase OS=Kluyveromyces lactis GN=GL... [more]
GLNA_COLGL3.403e-5164.83Glutamine synthetase OS=Colletotrichum gloeosporio... [more]
GLNA_YARLI4.444e-5163.45Glutamine synthetase OS=Yarrowia lipolytica GN=GLN... [more]
GLNA_NEUCR4.444e-5162.07Glutamine synthetase OS=Neurospora crassa GN=gln-1... [more]
GLNA_FUSSH7.580e-5154.95Glutamine synthetase OS=Fusarium solani subsp. pha... [more]
GLNA_SCHPO9.900e-5163.45Glutamine synthetase OS=Schizosaccharomyces pombe ... [more]
GLNA_ASHGO9.900e-5162.59Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE... [more]
GLNA1_CHLRE1.689e-5052.46Glutamine synthetase cytosolic isozyme OS=Chlamydo... [more]
GLNA_CHICK2.205e-5063.58Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YM23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259971 ID=DY259971; Name=DY259971; organism=Citrus clementina; type=EST; length=920bp
CATTGAGCCCCTCTACACTCTTCTTCAAAAAGACATAAACTGGCCCTTGG
GGTGGCCAGTTGGCGGCTATCCTGGCCCTCAGGGACCTTACTACTGCGGT
GTTGGCGCTGATAAGGCTTTAGGCCGAGACATTGTGAATTCTCACTACAA
AGCTTGCCTTTACGCTGGAATTAACATCAGTGGCATTAACGGTGAAGTTA
TGCCGGGTCAGTGGGAATTCCAAGTGGGTCCCTGTGTGGGTATCTCTTCT
GGTGATCAGTTATGGATGGCTCGGTACATACTCGAGAGGATTACTGAAAT
TGCCGGAGTTGTTCTTTCATTTGATCCAAAACCAATCAAGGGTGACTGGA
ATGGTGCTGGTGCACACGCCAACTACAGCACCAAGTCTATGAGGAATGAT
GGTGGAATTGATGTGATCAACAAGGCAATTGAAAAGTTGGGGAAACGCCC
CGGGGAACACATTGCTGCTTATGGAGAGGGCAACGAAAGAAGACTGACTG
GTCGACATGAAATTGCAGATATCAACACTTTCTCTTGGGGTGTTTCCTAA
TAAAGGTGCCTCCATTCACGTTTGGCCTTGACACCGCCAAAGATGGAAAA
GGAATACTCTTTAAGAACAACGGCCCCCCTTATACACAAACCCATTTGCT
GTGAATTTCTATAATCCTTAACACCTTCTTACTGCGGTACCCATTACATA
AAACGGTGATCTGTTACAAAGATACAAAAACACAGTAAATGGTAACTCTC
TATATCACCCCACTCACTAACAGATCCCACGTCTCCAACTATAACCGAAT
CCTTACGCAAATGCTACAATTAAATTCACTACGTTTAATTTTATATCTCC
TATCTTATCACTATTACCTAACTTACCCCTCCTCGTCCTCCAATCCCCAA
ACCTATTTACCCCTTCCCGG
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