DY259971

Overview
NameDY259971
Unique NameDY259971
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length920
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_XENLA (Glutamine synthetase OS=Xenopus laevis GN=glul PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.880e-50
Identity = 96/151 (63.58%), Postives = 110/151 (72.85%), Query Frame = 2
Query:  107 ADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAY----GEGNERRLTGRHEIADINTFSWGVS 547
            ADK  GRD+V SHYKACLYAGI I G N EVMP QWEFQVGPC GI  GD LWMAR+IL R+ E  GVV + DPKP+ G+WNGAG H NYST+SMR +GG+  I  AIEKLGKR   HI  Y    G+ N RRLTG+HE + I+ FS GV+
Sbjct:  167 ADKVYGRDVVESHYKACLYAGIKICGTNAEVMPSQWEFQVGPCEGIDMGDHLWMARFILHRVCEDFGVVATLDPKPMTGNWNGAGCHTNYSTESMRVEGGLKHIEDAIEKLGKRHDYHICVYDPRGGKDNSRRLTGQHETSSIHEFSAGVA 317          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_TUBBO (Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.762e-50
Identity = 90/145 (62.07%), Postives = 111/145 (76.55%), Query Frame = 2
Query:  113 KALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            K   RDIV +HYKACL+AGI ISGIN EV+P QWEFQVGPCVGI  GD LW++RY+L R+ E  GV +SF PKPI GDWNG+G H N ST++MR++GG+  I +AI+KL  R  EHIA YG+ N  RLTGRHE  +I+ FS+GV+
Sbjct:  168 KVYCRDIVEAHYKACLFAGIKISGINAEVLPSQWEFQVGPCVGIEMGDHLWISRYLLHRVAEEFGVKISFHPKPIPGDWNGSGLHTNVSTQAMRDEGGMKAIEEAIQKLSTRHAEHIAVYGDDNTLRLTGRHETGNIDAFSYGVA 312          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA2_DROME (Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 4.913e-50
Identity = 103/186 (55.38%), Postives = 120/186 (64.52%), Query Frame = 2
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAY----GEGNERRLTGRHEIADINTFSWGVS 547
            IE  YT L  D   PL                   A+K   RDIV++HY+ACLYAGI +SG N EVMP QWEFQVGPC GIS GD LWMAR++L RI+E  G+V + DPKP+ GDWNGAGAH N STK+MR DGGI  I KA+ KL K    HI AY    G+ N RRLTG+HE + IN FS GV+
Sbjct:  139 IEQEYTFLDFD-GHPLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSGTNAEVMPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMPGDWNGAGAHTNVSTKAMREDGGIRDIEKAVAKLSKCHERHIRAYDPKQGQDNARRLTGKHETSSINDFSAGVA 323          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_MACFA (Glutamine synthetase OS=Macaca fascicularis GN=GLUL PE=2 SV=3)

HSP 1 Score: 197.208 bits (500), Expect = 1.095e-49
Identity = 93/151 (61.59%), Postives = 113/151 (74.83%), Query Frame = 2
Query:  107 ADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAY----GEGNERRLTGRHEIADINTFSWGVS 547
            AD+A GRDIV +HY+ACLYAG+ I+G N EVMP QWEFQ+GPC GIS GD LW+AR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G+  I +AIEKL KR   HI AY    G  N RRLTG HE ++IN FS GV+
Sbjct:  168 ADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 318          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_HUMAN (Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4)

HSP 1 Score: 197.208 bits (500), Expect = 1.095e-49
Identity = 93/151 (61.59%), Postives = 113/151 (74.83%), Query Frame = 2
Query:  107 ADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAY----GEGNERRLTGRHEIADINTFSWGVS 547
            AD+A GRDIV +HY+ACLYAG+ I+G N EVMP QWEFQ+GPC GIS GD LW+AR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G+  I +AIEKL KR   HI AY    G  N RRLTG HE ++IN FS GV+
Sbjct:  167 ADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 317          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_DUNSA (Glutamine synthetase (Fragment) OS=Dunaliella salina PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.095e-49
Identity = 91/182 (50.00%), Postives = 118/182 (64.84%), Query Frame = 2
Query:    2 IEPLYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAYGEGNERRLTGRHEIADINTFSWGVS 547
            IE  YTLL     WPL                   A +++GRDI   HY+ CL+AGI ISG+NGEV+P QWE+QVGP  GI+ GDQ+WM+RY++ R+ E+  V ++FDPKPI GDWNG+G H N+S +   +         + +KLGKR   HIAAYGEGNERRLTG+HE + +N FSWGV+
Sbjct:    9 IEQEYTLLNSVTKWPLGWPKGGYPAGQGPYYCSVGAGRSIGRDIPEVHYRCCLHAGIQISGVNGEVLPSQWEYQVGPVEGIAMGDQMWMSRYLMYRVAELFNVEVTFDPKPIPGDWNGSGGHVNFSNRQPESPPAGKQSRSSAKKLGKRHRWHIAAYGEGNERRLTGKHETSSMNDFSWGVA 190          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_SQUAC (Glutamine synthetase, mitochondrial OS=Squalus acanthias PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.430e-49
Identity = 93/151 (61.59%), Postives = 112/151 (74.17%), Query Frame = 2
Query:  107 ADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAY----GEGNERRLTGRHEIADINTFSWGVS 547
            ADKA GRDIV +HY+ACLYAGI +SG N EVM  QWE+QVGPC GI  GD LW++R+IL R+ E  G++ SFDPKPI G+WNGAG H N+STK+MR+DGG+  I  +IEKLGKR   HI AY    G  N R LTG HE ++IN FS GV+
Sbjct:  196 ADKAYGRDIVEAHYRACLYAGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLWISRFILHRVCEDFGIIASFDPKPIPGNWNGAGCHTNFSTKAMRDDGGLKYIEDSIEKLGKRHQYHIRAYDPKGGLDNARALTGHHETSNINEFSAGVA 346          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_PIG (Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV=3)

HSP 1 Score: 196.823 bits (499), Expect = 1.430e-49
Identity = 94/151 (62.25%), Postives = 111/151 (73.51%), Query Frame = 2
Query:  107 ADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAY----GEGNERRLTGRHEIADINTFSWGVS 547
            ADKA GRDIV +HY+ACLYAGI I G N EVMP QWEFQ+GPC GI  GD LW+AR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G+  I +AIEKL KR   HI AY    G  N RRLTG HE ++IN FS GV+
Sbjct:  167 ADKAYGRDIVEAHYRACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNTRRLTGFHETSNINDFSAGVA 317          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_BOVIN (Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV=4)

HSP 1 Score: 196.823 bits (499), Expect = 1.430e-49
Identity = 94/151 (62.25%), Postives = 111/151 (73.51%), Query Frame = 2
Query:  107 ADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAY----GEGNERRLTGRHEIADINTFSWGVS 547
            ADKA GRDIV +HY+ACLYAGI I G N EVMP QWEFQ+GPC GI  GD LW+AR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G+  I +AIEKL KR   HI AY    G  N RRLTG HE ++IN FS GV+
Sbjct:  167 ADKAYGRDIVEAHYRACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 317          
BLAST of DY259971 vs. ExPASy Swiss-Prot
Match: GLNA_CANFA (Glutamine synthetase OS=Canis familiaris GN=GLUL PE=1 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 2.438e-49
Identity = 93/151 (61.59%), Postives = 112/151 (74.17%), Query Frame = 2
Query:  107 ADKALGRDIVNSHYKACLYAGINISGINGEVMPGQWEFQVGPCVGISSGDQLWMARYILERITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVINKAIEKLGKRPGEHIAAY----GEGNERRLTGRHEIADINTFSWGVS 547
            ADKA GRDIV +HY+ACLYAGI I+G N EVMP QWEFQ+GPC GI  GD LW+AR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G+  I ++IEKL KR   HI AY    G  N RRLTG HE ++IN FS GV+
Sbjct:  167 ADKAYGRDIVEAHYRACLYAGIKIAGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEESIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 317          
The following BLAST results are available for this feature:
BLAST of DY259971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_XENLA2.880e-5063.58Glutamine synthetase OS=Xenopus laevis GN=glul PE=... [more]
GLNA_TUBBO3.762e-5062.07Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2... [more]
GLNA2_DROME4.913e-5055.38Glutamine synthetase 2 cytoplasmic OS=Drosophila m... [more]
GLNA_MACFA1.095e-4961.59Glutamine synthetase OS=Macaca fascicularis GN=GLU... [more]
GLNA_HUMAN1.095e-4961.59Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 ... [more]
GLNA_DUNSA1.095e-4950.00Glutamine synthetase (Fragment) OS=Dunaliella sali... [more]
GLNA_SQUAC1.430e-4961.59Glutamine synthetase, mitochondrial OS=Squalus aca... [more]
GLNA_PIG1.430e-4962.25Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV... [more]
GLNA_BOVIN1.430e-4962.25Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV... [more]
GLNA_CANFA2.438e-4961.59Glutamine synthetase OS=Canis familiaris GN=GLUL P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YM23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259971 ID=DY259971; Name=DY259971; organism=Citrus clementina; type=EST; length=920bp
CATTGAGCCCCTCTACACTCTTCTTCAAAAAGACATAAACTGGCCCTTGG
GGTGGCCAGTTGGCGGCTATCCTGGCCCTCAGGGACCTTACTACTGCGGT
GTTGGCGCTGATAAGGCTTTAGGCCGAGACATTGTGAATTCTCACTACAA
AGCTTGCCTTTACGCTGGAATTAACATCAGTGGCATTAACGGTGAAGTTA
TGCCGGGTCAGTGGGAATTCCAAGTGGGTCCCTGTGTGGGTATCTCTTCT
GGTGATCAGTTATGGATGGCTCGGTACATACTCGAGAGGATTACTGAAAT
TGCCGGAGTTGTTCTTTCATTTGATCCAAAACCAATCAAGGGTGACTGGA
ATGGTGCTGGTGCACACGCCAACTACAGCACCAAGTCTATGAGGAATGAT
GGTGGAATTGATGTGATCAACAAGGCAATTGAAAAGTTGGGGAAACGCCC
CGGGGAACACATTGCTGCTTATGGAGAGGGCAACGAAAGAAGACTGACTG
GTCGACATGAAATTGCAGATATCAACACTTTCTCTTGGGGTGTTTCCTAA
TAAAGGTGCCTCCATTCACGTTTGGCCTTGACACCGCCAAAGATGGAAAA
GGAATACTCTTTAAGAACAACGGCCCCCCTTATACACAAACCCATTTGCT
GTGAATTTCTATAATCCTTAACACCTTCTTACTGCGGTACCCATTACATA
AAACGGTGATCTGTTACAAAGATACAAAAACACAGTAAATGGTAACTCTC
TATATCACCCCACTCACTAACAGATCCCACGTCTCCAACTATAACCGAAT
CCTTACGCAAATGCTACAATTAAATTCACTACGTTTAATTTTATATCTCC
TATCTTATCACTATTACCTAACTTACCCCTCCTCGTCCTCCAATCCCCAA
ACCTATTTACCCCTTCCCGG
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