DY259973

Overview
NameDY259973
Unique NameDY259973
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.400e-45
Identity = 67/86 (77.91%), Postives = 76/86 (88.37%), Query Frame = 3 
Query:   72 MAKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            M KNSFKL +PLE R AE+ RIR KYP+R+PVIVE+A +SDVP+IDKKKYLVPADLT+GQFVYVVRKRIKL  EKAIF+FVKN LP
Sbjct:    1 MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLP 86

HSP 2 Score: 67.3958 bits (163), Expect = 1.400e-45
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:  316 KTFCPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            K   PPTAA+MSAIYEE++DEDGFLYMTYSGENTFG
Sbjct:   82 KNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 6.862e-45
Identity = 66/83 (79.52%), Postives = 77/83 (92.77%), Query Frame = 3 
Query:   81 NSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            +SFK EHP E+RQAEA RIR KYPDRIPVI E+A++SD+P+IDKKKYLVPADLTVGQFVYV+RKRIKL+PEKAIFIF+ N+LP
Sbjct:    2 SSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLP 84

HSP 2 Score: 59.6918 bits (143), Expect = 6.862e-45
Identity = 26/32 (81.25%), Postives = 29/32 (90.62%), Query Frame = 1 
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA+MS IYEE +D DGFLY+TYSGENTFG
Sbjct:   84 PPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115
[Close]
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_NEUCR (Autophagy-related protein 8 OS=Neurospora crassa GN=atg-8 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.193e-43
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 3 
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKL+PEKAIFIFV  +LP
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLP 85

HSP 2 Score: 65.0846 bits (157), Expect = 6.193e-43
Identity = 28/34 (82.35%), Postives = 33/34 (97.06%), Query Frame = 1 
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFGIF 429
            PPTAA+MS+IYEE++DEDGFLY+TYSGENTFG F
Sbjct:   85 PPTAALMSSIYEEHKDEDGFLYITYSGENTFGDF 118
[Close]
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_PODAN (Autophagy-related protein 8 OS=Podospora anserina GN=ATG8 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.070e-43
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 3 
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKL+PEKAIFIFV  +LP
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLP 85

HSP 2 Score: 64.6994 bits (156), Expect = 8.070e-43
Identity = 28/34 (82.35%), Postives = 33/34 (97.06%), Query Frame = 1 
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFGIF 429
            PPTAA+MS+IYEE++DEDGFLY+TYSGENTFG F
Sbjct:   85 PPTAALMSSIYEEHKDEDGFLYITYSGENTFGGF 118
[Close]
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_COLLN (Autophagy-related protein 8 OS=Colletotrichum lindemuthianum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.070e-43
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 3 
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKL+PEKAIFIFV  +LP
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLP 85

HSP 2 Score: 64.6994 bits (156), Expect = 8.070e-43
Identity = 28/34 (82.35%), Postives = 33/34 (97.06%), Query Frame = 1 
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFGIF 429
            PPTAA+MS+IYEE++DEDGFLY+TYSGENTFG F
Sbjct:   85 PPTAALMSSIYEEHKDEDGFLYITYSGENTFGGF 118
[Close]
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_LACBI (Autophagy-related protein 8 OS=Laccaria bicolor GN=ATG8 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.336e-42
Identity = 62/84 (73.81%), Postives = 74/84 (88.10%), Query Frame = 3 
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP E+R+AEA RIR KYPDRIPVI E+A+++D+P IDKKKYLVP+DLTVGQFVYV+RKRIKL PEKAIFIFV  +LP
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLP 85

HSP 2 Score: 61.2326 bits (147), Expect = 1.336e-42
Identity = 26/32 (81.25%), Postives = 31/32 (96.88%), Query Frame = 1 
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA+MSAIYEE++DED FLY++YSGENTFG
Sbjct:   85 PPTAALMSAIYEEHKDEDNFLYVSYSGENTFG 116
[Close]
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_PENCW (Autophagy-related protein 8 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg8 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.371e-42
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 3 
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKL+PEKAIFIFV  +LP
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLP 85

HSP 2 Score: 63.929 bits (154), Expect = 1.371e-42
Identity = 27/32 (84.38%), Postives = 32/32 (100.00%), Query Frame = 1 
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA+MS+IYEE++DEDGFLY+TYSGENTFG
Sbjct:   85 PPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_NEOFI (Autophagy-related protein 8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg8 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.371e-42
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 3 
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKL+PEKAIFIFV  +LP
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLP 85

HSP 2 Score: 63.929 bits (154), Expect = 1.371e-42
Identity = 27/32 (84.38%), Postives = 32/32 (100.00%), Query Frame = 1 
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA+MS+IYEE++DEDGFLY+TYSGENTFG
Sbjct:   85 PPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_ASPTN (Autophagy-related protein 8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg8 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.371e-42
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 3 
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKL+PEKAIFIFV  +LP
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLP 85

HSP 2 Score: 63.929 bits (154), Expect = 1.371e-42
Identity = 27/32 (84.38%), Postives = 32/32 (100.00%), Query Frame = 1 
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA+MS+IYEE++DEDGFLY+TYSGENTFG
Sbjct:   85 PPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_ASPOR (Autophagy-related protein 8 OS=Aspergillus oryzae GN=atg8 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.371e-42
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 3 
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKL+PEKAIFIFV  +LP
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLP 85

HSP 2 Score: 63.929 bits (154), Expect = 1.371e-42
Identity = 27/32 (84.38%), Postives = 32/32 (100.00%), Query Frame = 1 
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA+MS+IYEE++DEDGFLY+TYSGENTFG
Sbjct:   85 PPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
The following BLAST results are available for this feature:
BLAST of DY259973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8B_ARATH1.400e-4577.91Autophagy-related protein 8b OS=Arabidopsis thalia... [more]
ATG8_PHYIN6.862e-4579.52Autophagy-related protein 8 OS=Phytophthora infest... [more]
ATG8_NEUCR6.193e-4375.00Autophagy-related protein 8 OS=Neurospora crassa G... [more]
ATG8_PODAN8.070e-4375.00Autophagy-related protein 8 OS=Podospora anserina ... [more]
ATG8_COLLN8.070e-4375.00Autophagy-related protein 8 OS=Colletotrichum lind... [more]
ATG8_LACBI1.336e-4273.81Autophagy-related protein 8 OS=Laccaria bicolor GN... [more]
ATG8_PENCW1.371e-4275.00Autophagy-related protein 8 OS=Penicillium chrysog... [more]
ATG8_NEOFI1.371e-4275.00Autophagy-related protein 8 OS=Neosartorya fischer... [more]
ATG8_ASPTN1.371e-4275.00Autophagy-related protein 8 OS=Aspergillus terreus... [more]
ATG8_ASPOR1.371e-4275.00Autophagy-related protein 8 OS=Aspergillus oryzae ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259973 ID=DY259973; Name=DY259973; organism=Citrus clementina; type=EST; length=629bp
CTTGCCTGCTTTTGTTGCTTATCAATTTTGCGATCTCAGCTACATTTCTC
TCTGAAACGGAAAGCACGCTCATGGCGAAAAATTCTTTTAAGCTAGAACA
CCCCCTCGAGAGGAGGCAGGCTGAAGCTGCTCGCATCAGAGACAAGTATC
CAGACAGAATCCCAGTGATTGTGGAGAGGGCCGAAAAAAGTGATGTACCT
GAAATTGACAAGAAGAAATATCTGGTTCCTGCTGATCTGACTGTTGGCCA
GTTTGTGTATGTGGTGCGAAAGAGGATCAAGCTCACTCCTGAGAAGGCTA
TTTTCATTTTTGTGAAAAACATTCTGCCCACCCACTGCGGCAATGATGTC
TGCCATATATGAGGAAAACAGGGATGAAGATGGCTTCCTTTACATGACCT
ACAGTGGGGAGAATACATTTGGGATCTTCTGAAGTGTGATCAAGCTACTA
TTATGTGAATAATGCTTCACGAAGTTAGGTGAAGAAGGGGTTAAGTTGTA
AATAGTTCTAAGTTCCATTACTTTGGAATTTTCTTTTAGTTAAGGGTATT
AAATGTAACAACCCTAAAAAATTGGGATCCACAAACTATTTACATAAAAT
TCCAACAGTTTTCTCTATGCCCTCGCTTG
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