DY259973

Overview
NameDY259973
Unique NameDY259973
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_CANGA (Autophagy-related protein 8 OS=Candida glabrata GN=ATG8 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.639e-40
Identity = 60/84 (71.43%), Postives = 74/84 (88.10%), Query Frame = 3
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            K+SFK E+P E+R+AE+ RI +K+ +RIPVI E+AEKSD+PE+DK+KYLVPADLTVGQFVYV+RKRI L PEKAIFIFV + LP
Sbjct:    2 KSSFKSEYPFEKRKAESERISEKFQNRIPVICEKAEKSDIPEVDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLP 85          

HSP 2 Score: 58.9214 bits (141), Expect = 4.639e-40
Identity = 23/32 (71.88%), Postives = 31/32 (96.88%), Query Frame = 1
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTA++MS +Y+E++D+DGFLY+TYSGENTFG
Sbjct:   85 PPTASLMSQVYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_LODEL (Autophagy-related protein 8 OS=Lodderomyces elongisporus GN=ATG8 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.726e-40
Identity = 60/84 (71.43%), Postives = 71/84 (84.52%), Query Frame = 3
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP E+RQAEAARI  ++ DR+PVI E+ E SD+PEIDK+KYLVP DLTVGQFVYV+RKRIKL  EKAIFIFV +ILP
Sbjct:    2 RSQFKDEHPFEKRQAEAARIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILP 85          

HSP 2 Score: 58.5362 bits (140), Expect = 7.726e-40
Identity = 24/32 (75.00%), Postives = 30/32 (93.75%), Query Frame = 1
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA++S IYEE++D+DGFLY+ YSGENTFG
Sbjct:   85 PPTAALISTIYEEHKDDDGFLYVLYSGENTFG 116          
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_PICAN (Autophagy-related protein 8 OS=Pichia angusta GN=ATG8 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.020e-39
Identity = 61/84 (72.62%), Postives = 74/84 (88.10%), Query Frame = 3
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP ERR+AEA+RIR K+ DRIPVI E+ E+SD+PEIDK+KYLVP+DLTVGQFVYV+RKRI+L  EKAIFIFV +ILP
Sbjct:    2 RSQFKDEHPFERRKAEASRIRGKFLDRIPVICEKVEESDIPEIDKRKYLVPSDLTVGQFVYVIRKRIQLPSEKAIFIFVNDILP 85          

HSP 2 Score: 57.7658 bits (138), Expect = 1.020e-39
Identity = 24/32 (75.00%), Postives = 29/32 (90.62%), Query Frame = 1
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTA++MS IYE+ +DEDGFLY+ YSGENTFG
Sbjct:   85 PPTASLMSTIYEQYKDEDGFLYILYSGENTFG 116          
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_PICST (Autophagy-related protein 8 OS=Pichia stipitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.908e-39
Identity = 58/84 (69.05%), Postives = 70/84 (83.33%), Query Frame = 3
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP E+RQAEA RI  ++ DR+PVI E+ E SD+PEIDK+KYLVP DL+VGQFVYV+RKRIKL  EKAIFIFV +ILP
Sbjct:    2 RSQFKDEHPFEKRQAEATRIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLSVGQFVYVIRKRIKLPSEKAIFIFVNDILP 85          

HSP 2 Score: 59.6918 bits (143), Expect = 2.908e-39
Identity = 25/32 (78.12%), Postives = 30/32 (93.75%), Query Frame = 1
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA++S IYEE++DEDGFLY+ YSGENTFG
Sbjct:   85 PPTAALISTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_SCHPO (Autophagy-related protein 8 OS=Schizosaccharomyces pombe GN=atg8 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.855e-39
Identity = 57/84 (67.86%), Postives = 71/84 (84.52%), Query Frame = 3
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK +   E+R+ E+ RIR+KYPDRIPVI E+ +KSD+  IDKKKYLVP+DLTVGQFVYV+RKRIKL+PEKAIFIF+  ILP
Sbjct:    2 RSQFKDDFSFEKRKTESQRIREKYPDRIPVICEKVDKSDIAAIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFIDEILP 85          

HSP 2 Score: 61.2326 bits (147), Expect = 3.855e-39
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 1
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA+MS IYEE++ EDGFLY+TYSGENTFG
Sbjct:   85 PPTAALMSTIYEEHKSEDGFLYITYSGENTFG 116          
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_DEBHA (Autophagy-related protein 8 OS=Debaryomyces hansenii GN=ATG8 PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.856e-38
Identity = 56/84 (66.67%), Postives = 70/84 (83.33%), Query Frame = 3
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            ++ FK EHP E+R+AEA RI  ++ DR+PVI E+AE SD+ EIDK+KYLVP DL+VGQFVYV+RKRIKL  EKAIFIF+ +ILP
Sbjct:    2 RSQFKDEHPFEKRKAEATRITQRFNDRLPVICEKAENSDIQEIDKRKYLVPGDLSVGQFVYVIRKRIKLPSEKAIFIFINDILP 85          

HSP 2 Score: 61.2326 bits (147), Expect = 1.856e-38
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 1
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA+MS IYEE++DEDGFLY+ YSGENTFG
Sbjct:   85 PPTAALMSTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_ASHGO (Autophagy-related protein 8 OS=Ashbya gossypii GN=ATG8 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.040e-37
Identity = 56/83 (67.47%), Postives = 72/83 (86.75%), Query Frame = 3
Query:   81 NSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            +SFK E+P E+R+AE+ RI  ++ +R+PVI ERAEKSD+PE+D++KYLVPADLTVGQFVYV+R+RIKL  EKAIFIFV + LP
Sbjct:    2 SSFKSEYPFEKRKAESERICSQFENRVPVICERAEKSDIPEVDRRKYLVPADLTVGQFVYVIRRRIKLPAEKAIFIFVNDTLP 84          

HSP 2 Score: 57.3806 bits (137), Expect = 2.040e-37
Identity = 23/32 (71.88%), Postives = 30/32 (93.75%), Query Frame = 1
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA+M A+Y+E++D+DGFLY+ YSGENTFG
Sbjct:   84 PPTAALMFAVYQEHKDKDGFLYVKYSGENTFG 115          
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_KLULA (Autophagy-related protein 8 OS=Kluyveromyces lactis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 3.721e-36
Identity = 57/84 (67.86%), Postives = 69/84 (82.14%), Query Frame = 3
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            K++FK E P E+R+AE+ RI  K+ +RIPVI ER  KSD+P+IDK+KYLVP DLTVGQFVYV+RKRIKL  EKAIFIFV + LP
Sbjct:    2 KSAFKSEFPFEKRKAESERIVQKFHNRIPVICERGGKSDIPDIDKRKYLVPGDLTVGQFVYVIRKRIKLPAEKAIFIFVNDTLP 85          

HSP 2 Score: 56.225 bits (134), Expect = 3.721e-36
Identity = 22/32 (68.75%), Postives = 31/32 (96.88%), Query Frame = 1
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA+MS+IY++++D+DGFLY++YS ENTFG
Sbjct:   85 PPTAALMSSIYQQHKDKDGFLYVSYSSENTFG 116          
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8_DICDI (Autophagy-related protein 8 OS=Dictyostelium discoideum GN=atg8 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.272e-35
Identity = 53/84 (63.10%), Postives = 70/84 (83.33%), Query Frame = 3
Query:   81 NSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRI-KLTPEKAIFIFVKNILP 329
            +SFK +HPL++R+  A RIR KY DRIPVIVE+A +SD P+IDKKKYLVPAD+TVG+FVY +RK + K++ EKAI++FV N +P
Sbjct:    5 SSFKNDHPLDKRREVAERIRSKYLDRIPVIVEKAPRSDAPDIDKKKYLVPADITVGKFVYEIRKHMTKVSAEKAIYLFVNNTIP 88          

HSP 2 Score: 58.5362 bits (140), Expect = 5.272e-35
Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 1
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPTAA++S IYE  +DEDGFLY+TYSGENTFG
Sbjct:   88 PPTAALISQIYERYKDEDGFLYITYSGENTFG 119          
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: GBRL1_PONAB (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Pongo abelii GN=GABARAPL1 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.485e-31
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 3
Query:   78 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
            K  +K +HP E R+ E  +IR KYPDR+PVIVE+A K+ VP++DK+KYLVP+DLTVGQF +++RKRI L PE A+F FV N +P
Sbjct:    2 KFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIP 85          

HSP 2 Score: 45.8246 bits (107), Expect = 2.485e-31
Identity = 18/32 (56.25%), Postives = 25/32 (78.12%), Query Frame = 1
Query:  328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
            PPT+A M  +YE+NR+ED FLY+ YS E+ +G
Sbjct:   85 PPTSATMGQLYEDNREEDYFLYVAYSDESVYG 116          
The following BLAST results are available for this feature:
BLAST of DY259973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_CANGA4.639e-4071.43Autophagy-related protein 8 OS=Candida glabrata GN... [more]
ATG8_LODEL7.726e-4071.43Autophagy-related protein 8 OS=Lodderomyces elongi... [more]
ATG8_PICAN1.020e-3972.62Autophagy-related protein 8 OS=Pichia angusta GN=A... [more]
ATG8_PICST2.908e-3969.05Autophagy-related protein 8 OS=Pichia stipitis GN=... [more]
ATG8_SCHPO3.855e-3967.86Autophagy-related protein 8 OS=Schizosaccharomyces... [more]
ATG8_DEBHA1.856e-3866.67Autophagy-related protein 8 OS=Debaryomyces hansen... [more]
ATG8_ASHGO2.040e-3767.47Autophagy-related protein 8 OS=Ashbya gossypii GN=... [more]
ATG8_KLULA3.721e-3667.86Autophagy-related protein 8 OS=Kluyveromyces lacti... [more]
ATG8_DICDI5.272e-3563.10Autophagy-related protein 8 OS=Dictyostelium disco... [more]
GBRL1_PONAB2.485e-3159.52Gamma-aminobutyric acid receptor-associated protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259973 ID=DY259973; Name=DY259973; organism=Citrus clementina; type=EST; length=629bp
CTTGCCTGCTTTTGTTGCTTATCAATTTTGCGATCTCAGCTACATTTCTC
TCTGAAACGGAAAGCACGCTCATGGCGAAAAATTCTTTTAAGCTAGAACA
CCCCCTCGAGAGGAGGCAGGCTGAAGCTGCTCGCATCAGAGACAAGTATC
CAGACAGAATCCCAGTGATTGTGGAGAGGGCCGAAAAAAGTGATGTACCT
GAAATTGACAAGAAGAAATATCTGGTTCCTGCTGATCTGACTGTTGGCCA
GTTTGTGTATGTGGTGCGAAAGAGGATCAAGCTCACTCCTGAGAAGGCTA
TTTTCATTTTTGTGAAAAACATTCTGCCCACCCACTGCGGCAATGATGTC
TGCCATATATGAGGAAAACAGGGATGAAGATGGCTTCCTTTACATGACCT
ACAGTGGGGAGAATACATTTGGGATCTTCTGAAGTGTGATCAAGCTACTA
TTATGTGAATAATGCTTCACGAAGTTAGGTGAAGAAGGGGTTAAGTTGTA
AATAGTTCTAAGTTCCATTACTTTGGAATTTTCTTTTAGTTAAGGGTATT
AAATGTAACAACCCTAAAAAATTGGGATCCACAAACTATTTACATAAAAT
TCCAACAGTTTTCTCTATGCCCTCGCTTG
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