DY259973
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8L_DICDI (Autophagy-related protein 8-like protein DDB_G0290491 OS=Dictyostelium discoideum GN=DDB_G0290491 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 8.382e-25 Identity = 41/90 (45.56%), Postives = 64/90 (71.11%), Query Frame = 3
Query: 72 MAKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRI---KLTPEKAIFIFV-KNILP 329
+ SFK E+ LE+R+ +++IR++Y DR+P+IVERA SDVP+I+KKK+L P+++ + F+ +RK + +KAIF+FV KN LP
Sbjct: 3 LLSKSFKQEYSLEKRKLISSKIRNRYKDRLPIIVERAANSDVPDINKKKFLAPSNMVITNFIMEIRKHLDDSDHNEQKAIFLFVNKNNLP 92 HSP 2 Score: 52.7582 bits (125), Expect = 8.382e-25 Identity = 21/36 (58.33%), Postives = 30/36 (83.33%), Query Frame = 1
Query: 316 KTFCPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
K PP++ ++S+IY+ ++DEDGFLY+ YSGENTFG
Sbjct: 88 KNNLPPSSQLLSSIYDAHKDEDGFLYICYSGENTFG 123
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.874e-24 Identity = 41/82 (50.00%), Postives = 60/82 (73.17%), Query Frame = 3
Query: 84 SFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILP 329
SFK + + R E+ I KYPDRIPVI+E+ +D+P+++K KYLVP D+TVG F++++ KR++L P KA+F+FV N LP
Sbjct: 7 SFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLP 88 HSP 2 Score: 42.743 bits (99), Expect = 1.874e-24 Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 1
Query: 328 PPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 423
P TA+ M ++Y ++EDGFLYM YS E TFG
Sbjct: 88 PQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: MLP3C_HUMAN (Microtubule-associated proteins 1A/1B light chain 3C OS=Homo sapiens GN=MAP1LC3C PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.315e-17 Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 3
Query: 87 FKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSD-VPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKN 320
FK L RQ E A IR K+P++IPV+VER + +P +DK K+LVP +LT+ QF+ ++R R+ L +A ++ V N
Sbjct: 13 FKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNN 91 HSP 2 Score: 41.5874 bits (96), Expect = 6.315e-17 Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 1
Query: 337 AAMMSAIYEENRDEDGFLYMTYSGENTFG 423
+A M+ IY + +DEDGF+YMTY+ + TFG
Sbjct: 98 SATMAEIYRDYKDEDGFVYMTYASQETFG 126
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: MLP3A_RAT (Microtubule-associated proteins 1A/1B light chain 3A OS=Rattus norvegicus GN=Map1lc3a PE=1 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 5.688e-15 Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 3
Query: 87 FKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFV 314
FK R E +IRD++P +IPVI+ER + + +P +DK K+LVP + + + V ++R+R++L P +A F+ V
Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLV 83 HSP 2 Score: 40.0466 bits (92), Expect = 5.688e-15 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 1
Query: 355 IYEENRDEDGFLYMTYSGENTFG 423
IYE+ +DEDGFLYM Y+ + TFG
Sbjct: 98 IYEQEKDEDGFLYMVYASQETFG 120
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: MLP3A_MOUSE (Microtubule-associated proteins 1A/1B light chain 3A OS=Mus musculus GN=Map1lc3a PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 5.688e-15 Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 3
Query: 87 FKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFV 314
FK R E +IRD++P +IPVI+ER + + +P +DK K+LVP + + + V ++R+R++L P +A F+ V
Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLV 83 HSP 2 Score: 40.0466 bits (92), Expect = 5.688e-15 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 1
Query: 355 IYEENRDEDGFLYMTYSGENTFG 423
IYE+ +DEDGFLYM Y+ + TFG
Sbjct: 98 IYEQEKDEDGFLYMVYASQETFG 120
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: MLP3A_HUMAN (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2) HSP 1 Score: 62.3882 bits (150), Expect = 5.688e-15 Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 3
Query: 87 FKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFV 314
FK R E +IRD++P +IPVI+ER + + +P +DK K+LVP + + + V ++R+R++L P +A F+ V
Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLV 83 HSP 2 Score: 40.0466 bits (92), Expect = 5.688e-15 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 1
Query: 355 IYEENRDEDGFLYMTYSGENTFG 423
IYE+ +DEDGFLYM Y+ + TFG
Sbjct: 98 IYEQEKDEDGFLYMVYASQETFG 120
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: MLP3B_RAT (Microtubule-associated proteins 1A/1B light chain 3B OS=Rattus norvegicus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 60.077 bits (144), Expect = 9.259e-15 Identity = 26/81 (32.10%), Postives = 52/81 (64.20%), Query Frame = 3
Query: 75 AKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFV 314
++ +FK E+R + IR+++P +IPVI+ER + + +P +DK K+LVP + + + + ++R+R++L +A F+ V
Sbjct: 3 SEKTFKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLV 83 HSP 2 Score: 41.5874 bits (96), Expect = 9.259e-15 Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 1
Query: 346 MSAIYEENRDEDGFLYMTYSGENTFG 423
+S +YE RDEDGFLYM Y+ + TFG
Sbjct: 95 ISEVYESERDEDGFLYMVYASQETFG 120
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: LGG2_CAEEL (Protein lgg-2 OS=Caenorhabditis elegans GN=lgg-2 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.377e-15 Identity = 30/78 (38.46%), Postives = 52/78 (66.67%), Query Frame = 3
Query: 84 SFKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFV 314
SFK P RQ + IR + P+++PVI+ER + + +P +D+ K+LVP +TV + + +VR+R++L P++A F+ V
Sbjct: 16 SFKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLV 93 HSP 2 Score: 35.039 bits (79), Expect = 9.377e-15 Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 1
Query: 346 MSAIYEENRDEDGFLYMTYSGENTFG 423
MS +Y + RD DGF+YM Y+ + FG
Sbjct: 105 MSNLYSQERDPDGFVYMVYTSQPAFG 130
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: MLP3B_BOVIN (Microtubule-associated proteins 1A/1B light chain 3B OS=Bos taurus GN=MAP1LC3B PE=1 SV=4) HSP 1 Score: 62.003 bits (149), Expect = 9.495e-15 Identity = 27/96 (28.12%), Postives = 55/96 (57.29%), Query Frame = 3
Query: 75 AKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFVKNILPTHCGNDVCHI 359
++ +FK E+R + IR+++P +IPVI+ER + + +P +DK K+LVP + + + + ++R+R++L +A F+ V +C +
Sbjct: 3 SEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPICEV 98 HSP 2 Score: 39.6614 bits (91), Expect = 9.495e-15 Identity = 16/28 (57.14%), Postives = 21/28 (75.00%), Query Frame = 1
Query: 355 IYEENRDEDGFLYMTYSGENTFGIF*SV 438
+YE +DEDGFLYM Y+ + TFG+ SV
Sbjct: 98 VYESEKDEDGFLYMVYASQETFGMKLSV 125
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: MLP3B_MOUSE (Microtubule-associated proteins 1A/1B light chain 3B OS=Mus musculus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 60.077 bits (144), Expect = 9.495e-15 Identity = 26/81 (32.10%), Postives = 52/81 (64.20%), Query Frame = 3
Query: 75 AKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFV 314
++ +FK E+R + IR+++P +IPVI+ER + + +P +DK K+LVP + + + + ++R+R++L +A F+ V
Sbjct: 3 SEKTFKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLV 83 HSP 2 Score: 41.5874 bits (96), Expect = 9.495e-15 Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 1
Query: 346 MSAIYEENRDEDGFLYMTYSGENTFG 423
+S +YE RDEDGFLYM Y+ + TFG
Sbjct: 95 ISEVYESERDEDGFLYMVYASQETFG 120 The following BLAST results are available for this feature:
BLAST of DY259973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259973 ID=DY259973; Name=DY259973; organism=Citrus clementina; type=EST; length=629bpback to top |