DY259984

Overview
NameDY259984
Unique NameDY259984
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length995
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 5.008e-67
Identity = 122/219 (55.71%), Postives = 149/219 (68.04%), Query Frame = 1
Query:  148 QSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTMLCPPIWHFGPT 795
            QS  ATFY              YGNLY+ GYG   AALS+ALFN+G  CG+CY + C+ +  KWC PG  SI +TATN CPPN AL +++GGWCNPP QHFDM++PA+  IA Y+AGIVP++++R+PC + GGIRF ++GH YF LV VTNV G+G V  +SIKGS TGW AMSRNWG NWQSN+YL GQSLSF  Q           + P  W FG T
Sbjct:   29 QSAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNWFFGAT 247          
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 5.008e-67
Identity = 122/219 (55.71%), Postives = 147/219 (67.12%), Query Frame = 1
Query:  145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPK-WCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTMLCPPIWHFGPT 795
            W    ATFY              YGNLY+ GYG N AALS+ALFN+G  CG+CY + C+     WC PG SI +TATN CPPN A  +D GGWCNPP +HFDM++PA+  IA Y+AGIVP++F+R+PC K GGIRFT++G  YF LV V NV G+G V  VSIKGSKT W AMSRNWG NWQSN+YLN QSLSF+ +   A       + P  W+FG T
Sbjct:   23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNWNFGTT 241          
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 5.008e-67
Identity = 121/221 (54.75%), Postives = 146/221 (66.06%), Query Frame = 1
Query:  145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGS-KTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTMLCPPIWHFGPT 795
            W   HATFY              Y +LYSQGYGT  AALSTALFN+G SCG CY++ C+    P+WC PG ++ VTATNFCPPN  L +DNGGWCNPP  HFDMA+PA+ +I  YRAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVLVTNV   G + S+ I GS  T W  M RNWG NW S SYL GQ LSF+   +     +   + P  W FG T
Sbjct:   50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQT 270          
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 5.008e-67
Identity = 120/221 (54.30%), Postives = 147/221 (66.52%), Query Frame = 1
Query:  145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGS-KTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTMLCPPIWHFGPT 795
            W   HATFY              YG+LYSQGYGT  AALSTALFN+G SCG CY++ C+    P+WC PG ++ +TATNFCPPN  L +DNGGWCNPP  HFDMA+PA+ +I  YRAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVLVTNV   G + S+ + GS  T W  M RNWG NW S SYL GQ LSF+   +     +   + P  W FG T
Sbjct:   52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQT 272          
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 3.246e-66
Identity = 119/222 (53.60%), Postives = 156/222 (70.27%), Query Frame = 1
Query:  142 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTM---LCPPIWHFG 789
            GW SG ATFY              YGNLY  GYGTNTAALS+ALFN+G SCG CY++ C++  +P+WCL G ++ +T TN CPPN ALS+++GGWCNPP  HFDMAEPA+LQI  Y+AGIVP+ ++R+PC K+GG+RFT+ G +YF LVL++NV G+G + SV +KG  T    +SRNWG NWQS++ L GQ+L+F    VT+  G T +   + P  W FG
Sbjct:   31 GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTF---GVTSTGGQTLVFQNIVPAWWKFG 249          
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 1.364e-64
Identity = 119/224 (53.12%), Postives = 152/224 (67.86%), Query Frame = 1
Query:  142 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTML---CPPIWHFGPT 795
            GW  G ATFY              YGNLY+ GYGTNTAALS+ LFN+G SCG CY + C+    P+WC  G+ + +TATN CPPN AL +++GGWCNPP  HFDMAEPA+LQI  Y+AGI+P+ ++++ C ++GGIRFT+ G ++F LVLV+NV G+G V SVS+KG  TGW  ++RNWG NWQ NS L GQ+LSF    VT+  G T  +    P  W FG T
Sbjct:   26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSF---AVTSTGGQTLYIYNVVPSWWSFGMT 246          
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 3.968e-64
Identity = 113/223 (50.67%), Postives = 148/223 (66.37%), Query Frame = 1
Query:  145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTT---MLCPPIWHFGPTLEG 804
            W    ATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYE+ C  DP+WCLPGS+ +TATNFCP N + + D   WCNPP +HFD++   FL+IA+Y+AG+VP+ +RRIPC+K GG++F   G+ YF +VL+ NV GAGD+  V +KG+KTGW  M +NWG NW + + L GQ LSF+   VT   G+T     + P  W FG T +G
Sbjct:   52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFR---VTTSDGITKDFWNVMPKNWGFGQTFDG 269          
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 5.183e-64
Identity = 116/227 (51.10%), Postives = 149/227 (65.64%), Query Frame = 1
Query:  127 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTMLCPPIWHFGPTLE 801
            G+    W S  ATFY              YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C+ +  +WC  G S+ VTATN+CPPN + S D GGWCNPP +HFDM++PA+  IA Y +GIVP+ + R PC + GGIRF + GH Y+ LVLVTNV G+G V +  +KGS T W +MSRNWG NWQSN+YL GQ+LSF+ Q    G+     + P  W FG T +
Sbjct:   21 GEAAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGSTYQ 247          
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 1.155e-63
Identity = 111/223 (49.78%), Postives = 145/223 (65.02%), Query Frame = 1
Query:  145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLT---TMLCPPIWHFGPTLEG 804
            W    ATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY++ C NDP+WCLPGS+ +TATNFCPP+   S   G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F   G+ YF ++L  NV GAGD+  + +KG KTGW  M +NWG NW +   L GQ +SF+   VT   G+T     + P  W FG T +G
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFR---VTTSDGVTKDFNNVMPNNWGFGQTFDG 265          
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 1.508e-63
Identity = 113/226 (50.00%), Postives = 147/226 (65.04%), Query Frame = 1
Query:  118 GTFGDYGG-----GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTMLCPPIW 780
            G    +GG     GW  G ATFY              YG+L+ QGYG  TAALSTALFNNG  CG+CYE+ CE+ P+WCLPGSI +TATNFCPP+    NDN  WCNPP +HFD+++P FL+IA+Y+AG+VP+ FRR+PCAK GG++F + G+ +F ++L  NV GAG V ++ IKG++T W AM +NWG  W +   L GQ LSF+       M     + PP W
Sbjct:   76 GALPSHGGQVPHSGWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDW 299          
The following BLAST results are available for this feature:
BLAST of DY259984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
EXPA3_ORYSJ5.008e-6755.71Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP33_ORYSJ5.008e-6755.71Expansin-A33 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP24_ORYSJ5.008e-6754.75Expansin-A24 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP22_ORYSJ5.008e-6754.30Expansin-A22 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP15_ORYSJ3.246e-6653.60Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP25_ORYSJ1.364e-6453.13Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP22_ARATH3.968e-6450.67Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXPA9_ORYSJ5.183e-6451.10Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP23_ARATH1.155e-6349.78Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP24_ARATH1.508e-6350.00Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259984 ID=DY259984; Name=DY259984; organism=Citrus clementina; type=EST; length=995bp
CTTTTTCTTAACAAATAAACACATAAACATAAGCAGCCAGCAGTAGCAGC
CATGGCCAATATTGCAGCATCATCTAGCGTTGCTCTCCTTTTGTTTGTGC
TCAATTTTTGCTTTCGTGGCACATTTGGAGACTATGGTGGTGGGTGGCAA
AGTGGCCATGCAACTTTCTATGGCGGGGGTGATGCTTCCGGCACAATGGG
TGGTGCTTGTGGGTATGGCAATTTGTACAGCCAAGGCTATGGGACTAACA
CTGCAGCACTTAGTACCGCTCTATTCAACAATGGCCTAAGCTGTGGTTCA
TGCTATGAAATGAAATGTGAAAATGACCCCAAGTGGTGCCTCCCCGGCTC
CATCATTGTCACCGCCACCAACTTCTGCCCACCTAACCTTGCCCTGTCTA
ACGACAACGGCGGTTGGTGCAATCCTCCCCTCCAGCACTTTGACATGGCT
GAGCCCGCTTTCTTGCAAATTGCCCAATACCGCGCCGGCATCGTCCCAAT
TTCCTTCAGAAGGATCCCGTGTGCGAAGAAAGGAGGAATAAGGTTTACCG
TCAATGGACACTCATACTTCAACCTGGTTTTGGTCACAAATGTCCGAGGA
GCAGGAGATGTACATTCAGTATCAATCAAGGGTTCAAAGACTGGATGGCA
AGCAATGTCAAGGAACTGGGGCCCAAATTGGCAGAGCAATTCTTATCTTA
ACGGCCAAAGTCTTTCTTTCCAGTGACAGCCAGTGACGGCAGGAATGGGA
CTCACCACCATGTTGTGCCCGCCAATTTGGCATTTTGGGCCAACCCTTGA
GGGTGGGTCCGTTTTAAATTTTAAAAATTTAAAAAAGTGGAACCAAAATT
GGAAATTTAATTGAAATTTGGCCTTTGGGTTTGGGAAAGGAAAAAGGGTG
AAAAAAGGGGGTAAGGGAAAGCCGAAAGGCCGGCCCCAAGTTGGCTCGGC
TTTGGTACCGGGGGGGGCCCCGTTGCGCCCCCCCCCCAAGCCCTC
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