DY259984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 1.969e-63 Identity = 112/223 (50.22%), Postives = 148/223 (66.37%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTT---MLCPPIWHFGPTLEG 804 W ATFY YGNL+ QGYG TAALSTALFN+G +CG+CYE+ C DP+WCLPGS+ +TATNFCP N + + D WCNPP +HFD++ FL+IA+Y+AG+VP+ +RRIPC+K GG++F G+ YF +VL+ NV GAGD+ V +K +KTGW M +NWG NW +++ L GQ LSF+ VT G+T + P W FG T +G Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFR---VTTTDGITKDFWNVMPKNWGFGQTFDG 275
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 7.484e-63 Identity = 112/224 (50.00%), Postives = 145/224 (64.73%), Query Frame = 1 Query: 139 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSK-TGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTMLCPPIWHFGPTLE 801 G W+ HATFY Y + +GYG T A+ST LF G CG+CYE+KC + P C G+ ++VTATN CPPN SNDNGGWCNPP +HFD++ PAFLQIAQ +AGIVPIS+RR+PC K GGIR+T+ G+ YFNLV+V+NV GAGDV +S+KG+K W + RNWG WQ++ L G+SL+F+ + + PP W FG T + Sbjct: 40 GPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTYQ 263
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 7.484e-63 Identity = 110/223 (49.33%), Postives = 145/223 (65.02%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLT---TMLCPPIWHFGPTLEG 804 W ATFY YG+L+ QGYG TAALSTALFN G +CG+CY++ C +DP+WCLPG+I +TATNFCPP+ S G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F G+ YF ++L NV GAGD+ + +KG KTGW M +NWG NW + L GQ +SF+ VT G+T + P W FG T +G Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFR---VTTSDGVTKDFNNVMPNNWGFGQTFDG 272
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 8.275e-62 Identity = 115/220 (52.27%), Postives = 142/220 (64.55%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDP--KWCLP-GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTMLCPPIWHFGPT 795 W ATFY YGNLY QGYG AALSTALFN+G +CG CY + C+ D +WC P G++ VTATN CPPN AL +D GGWCNPP +HFDM++PA+ +I YRAGIVP+ +RR+ C ++GG+RFTV G +F LVLV NV G+G V +VS++G+ TGW MSRNWG NWQS + L GQ LSF L + P W FG T Sbjct: 27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGWKFGQT 246
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 3.144e-61 Identity = 117/221 (52.94%), Postives = 143/221 (64.71%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTM-LCPPIWHFGPT 795 W ATFY YGNLY QGYG + AALS ALFN+G SCG CY + C+ P+WC G+ + VTATN CPPN AL +D GGWCNPP HFDM++PA+ QI Y+AGIVP+ ++R+ C ++GG+RFTV G +YF LVL+TNV G+G V S IKG+ TGW MSRNWG NWQS + L GQ+LSF T G L + P W FG T Sbjct: 28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFA-VTTTGGQYLQFQDVAPAWWQFGQT 247
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.844e-59 Identity = 105/220 (47.73%), Postives = 143/220 (65.00%), Query Frame = 1 Query: 139 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTM-LCPPIWHFGPT 795 G W+ HATFY YGNL++ GYG +TAALST LFN+G CG C+++ C P S +VTATN CPPN ++ GGWCNPP HFDMA+PAF+++A +RAGI+P+++RR+PC + GG+RF G+SY+ L+ V NV GAGD+ S+++KGS+T W +MS NWG ++Q+ S L GQSLSF+ T G + + P W G T Sbjct: 35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGGKT 254
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.699e-57 Identity = 106/225 (47.11%), Postives = 142/225 (63.11%), Query Frame = 1 Query: 136 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTM-LCPPIWHFGPTLE 801 G W++ ATFY YGN+Y GYG T ALSTALFN G +CG C+++KC + P C GS +VTATN CPPN +++NGGWCNPP HFD+ +PAF++IA ++AGI+P+S+RR+ C K GGIRF G+ Y+ LV V NV G GD+ ++++KGS+TGW MS NWG ++Q+ S L GQSLSF+ T + P W G T + Sbjct: 28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAGKTYQ 251
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 1.367e-56 Identity = 116/224 (51.79%), Postives = 139/224 (62.05%), Query Frame = 1 Query: 142 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTM---LCPPIWHFGPT 795 GW G ATFY YGNLY QGYG N AALST LFNNG SCG CY + C D P C G+ I VT TNFCPPN L GGWCN HFDM++PA+ I Y AGIVPI ++++ C + GG+RFT+ G +YF LVLVTN+ G+G + S+S+KGS TGW MSRNWG NWQ + L GQ+LSF VT+ G T + + P W FG T Sbjct: 22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSF---TVTSTGGQTIVFDSVVPAGWSFGQT 240
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 6.785e-56 Identity = 113/239 (47.28%), Postives = 147/239 (61.51%), Query Frame = 1 Query: 109 CFRGTFGDYGGGWQSGHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTM---LCPPIWHFGPTLEG 804 C R G Y W+ G AT+ YG+L YG TA +S ALF G +CG CYE++C N WCL GS ++VTAT+FC PNL LS+D GGWCN P +HF+M+E AFL++A+ +A IVP+ FRR+ C + GG+RFT+ G + F VL+TNV G+V +V +KGS+TGW M RNWG NWQ ++ L GQ LSF+ VT G G T + + PP W F T EG Sbjct: 21 CIRLGNGGYEE-WRMGSATYIKESLGHPLNDGGGACGYGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFE---VTGGRGRTVVAYSVAPPDWMFAQTFEG 255
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.157e-55 Identity = 112/223 (50.22%), Postives = 139/223 (62.33%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTML---CPPIWHFGPT 795 W G ATFY YGNLY QGYG N AALST LFN+G SCG CY + C+ P WC G +I VT TN+CPPN L GGWCN HFDM++PA+ I Y AGI+PI ++++ C + GG+RFT+NG +YF LVLVTN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF VT+ G T + P W FG T Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFN---VTSTGGQTIVFDDAVPAGWSFGQT 240 The following BLAST results are available for this feature:
BLAST of DY259984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259984 ID=DY259984; Name=DY259984; organism=Citrus clementina; type=EST; length=995bpback to top |