DY259984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 4.398e-55 Identity = 109/225 (48.44%), Postives = 140/225 (62.22%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGG--WCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIK-GSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMG-LTTMLCPPIWHFGPTLE 801 W HATFY YGNLY+ GYGT+TAALST LF +G CG+CY+M+C C GS I VTATN CPPN A D GG WCNPP HFD+++PAF+++A +RAGIVP+ +RR+PCA+ GG+RF + G+ Y+ L V NV GAGDV + +K G GW MS NWG ++Q+ + L GQ+LSF+ T G L + P W FG T + Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASWCFGLTYQ 260
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 4.862e-54 Identity = 100/221 (45.25%), Postives = 134/221 (60.63%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTMLCPPIWHFGPTLEG 804 W+ AT+Y YG+L GYG T LS LF G CG+C+E++C +D +WC+PG SII+TATNFC PN D GG CNPP +HF + AF +IA ++AG +P+ +RRI C K+G +RFTV+G F VL+TNV G+GD+ +V IKGS+TGW M RNWG NW N+ L Q+LSF+ + + P W++G T EG Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEG 260
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 1.415e-53 Identity = 107/224 (47.77%), Postives = 139/224 (62.05%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTM---LCPPIWHFGPTLEG 804 W+S A++Y +G+L GYG T LSTALF G +CG CYE+KC +D K+CLPG SI+VTATNFC PN L D GG CNPP HF + +F +IA ++AG++PI +RR+ C + GG+RF V G S+F VL++NV GAGDV SV IKG+++GW +M RNWG W NS GQ LSF+ +T+ G T + P W FG T G Sbjct: 33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFE---LTSSDGKTLTNYNVVPKEWDFGKTYTG 252
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 7.021e-53 Identity = 104/228 (45.61%), Postives = 138/228 (60.53%), Query Frame = 1 Query: 127 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE--NDPKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY-RAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSK-TGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTMLCPPIWHFGPT 795 G GW HAT+Y Y N Y G+G +TAALS LF +G SCG CY+++C+ DPKWCL G+ + VTATNFCP +N+N GWCN P HFDM+ PAF +IA+ GIVP+ +RR+ C ++GG+RFT+ G FN+V+++NV G G V SV+++GSK W M+RNWG NWQS+ L GQ LSF+ + + P W FG T Sbjct: 21 GMCSNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCP-----TNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQT 243
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 202.986 bits (515), Expect = 2.259e-51 Identity = 101/200 (50.50%), Postives = 131/200 (65.50%), Query Frame = 1 Query: 214 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLT---TMLCPPIWHFGPTLEG 804 YG+L GYG TAALSTALFN+G SCG+CYE+ C +P+ CL GSI +TAT+ CPP A WC P +HFD++ P F++IAQ +A +VP+ +RR+PCAK GG++F V G+ +L NV GAGD+ +VS KGSKT W MSR WG NW +N L GQS+S + VT G+T T + P W FG T +G Sbjct: 69 YGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLCPPGSA-------WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLR---VTTSDGITKDFTDVMPASWGFGQTFDG 258
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 5.563e-50 Identity = 96/202 (47.52%), Postives = 132/202 (65.35%), Query Frame = 1 Query: 214 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTM---LCPPIWHFGPTLEG 804 YG+L + +A LS LFN G SCG+C E++C N +WCL GS ++VTAT+FCPPN LS+D GGWCN P +H +++ AF IA+ RA ++PI +RR+ C ++GG+RF+++G S+F VL++NV G+V V +KG T W M+RNWG NW S+ L GQSLSF+ VT G T + PP W FG T +G Sbjct: 53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFE---VTLKGGKTIASYDVAPPYWRFGMTYQG 251
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 4.709e-49 Identity = 105/223 (47.09%), Postives = 132/223 (59.19%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE--NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTML---CPPIWHFGPT 795 W G ATFY YGNLY Q YG N AALST LFN+G SCG CY + C+ P WC G +I VT TN+ GGWCN +FDM++PA+ I Y AGIVPI ++++ C + GG+RF +NG +YF LVLVTN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF VT+ G T + P W FG T Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFN---VTSTGGQTIVFDDAVPAGWSFGQT 231
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 1.418e-45 Identity = 91/186 (48.92%), Postives = 114/186 (61.29%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSKTG--WQAMSRNWGPNWQ 684 W G ATFY N Y T TAALST LF +G CG CYE++C P WC PGS +++T TN CPPN L ND+GGWCNPP HFDMA P+FL++AQ AGIVP+ +RR+PC + GG+RF + G+ Y+ L+ V NV GAGDV S+S+K S G W + NWG +Q Sbjct: 52 WHDGSATFYGDPSGMGDDFGGACGYVSNDIVSLYSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQ 236
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 5.401e-37 Identity = 82/222 (36.94%), Postives = 127/222 (57.21%), Query Frame = 1 Query: 139 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVRGAGDVHSVSIKGSK-TGWQAMSRNWGPNWQSNSYLNGQSLSFQ*QPVTAGMGLTTMLCPPIWHFGPTLE 801 G W GHATFY G + GYG TAA+S ALF+NG CG+CYE+K ++ +++VTATN PP + N G +HFD+ PAFL IA+ + G+VP+S+R++ C ++GGI++T+ G+ +N+V+V NV GAGDV +++KG+K W + R+WG W++ + L G+SL+F+ + + P W + T + Sbjct: 80 GPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPPPV---NGMKG------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNTYQ 285
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 4.593e-20 Identity = 64/198 (32.32%), Postives = 94/198 (47.47%), Query Frame = 1 Query: 136 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKGGIRFTVNGHS--YFNLVLVTNVRGAGDVHSVSIKGSK--TGWQAMSRNWGPNWQSNS 693 G GW SG AT+Y Y + Q + + AA +LF NG CGSCY++KC + + C + V T+ CP GG C HFDM+ AF +A AG++ I ++R+PC + F V+ S Y+ +LV G GD+ +V I ++ GW+AM ++WG W+ NS Sbjct: 42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSCP---------GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNS 229 The following BLAST results are available for this feature:
BLAST of DY259984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259984 ID=DY259984; Name=DY259984; organism=Citrus clementina; type=EST; length=995bpback to top |