DY259984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.299e-18 Identity = 59/200 (29.50%), Postives = 91/200 (45.50%), Query Frame = 1 Query: 142 GWQSGHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG---GIRFTVNGHSYFNLVLVTNVRGAGDVHSVSI-----KGSKTGWQAMSRNWGPNWQSNS 693 GW G AT+Y Y G++ + + AA S +++ +G CGSCY++KC +P C + V T+ CP GG C HFD++ AF +A+ AG +P+ + R+PC +G R + Y+ VLV + G GD+ +V + G W AM ++WG W+ NS Sbjct: 37 GWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CSGKPVTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNS 226
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 5.255e-16 Identity = 59/197 (29.95%), Postives = 92/197 (46.70%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA------QYR-AGIVPISFRRIPCAKKGGIRFT----VNGHSYFNLVLVTNVRGAGDVHSVSI--KGSKTGWQAMSRNWGPNWQSNS 693 W +G AT+Y Y G ++ + + AA S +++ +GL CGSCY++KC + C + V T+ CP GG C HFD++ AF +A Q R AG++ I + R+PC GG++ T V + + VLV G GD+ V + G+ W M ++WG W+ N+ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CSGNPVTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNA 222
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.864e-16 Identity = 58/195 (29.74%), Postives = 88/195 (45.13%), Query Frame = 1 Query: 142 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVN--GHSYFNLVLVTNVRGAGDVHSVSIKGSKTGWQAMSRNWGPNWQSNS 693 GW + AT+Y Y Q + + AA S +L+ G CG+CYE+KC + C V T+ CP GG C HFDM+ + +A+ AGI+ + +RR+PC G I F V+ + ++ VL+ G GD+++V + + GW M +NWG W+ NS Sbjct: 63 GWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CSGQPATVVITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNS 247
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.294e-14 Identity = 62/213 (29.11%), Postives = 92/213 (43.19%), Query Frame = 1 Query: 118 GTFGDYGGGWQSGHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWC-LPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTV--NGHSYFNLVLVTNVRGAGDVHSV----------SIKGSKTG-WQAMSRNWGPNWQ 684 G+ G GGGW + AT+Y G N+ + T+ + LF +G CGSCY+++C P LP ++I+T N+ P + L HFD++ AF +A+ AGI+ I FRR+PC G + F V + + +LV G GDV V + G+ TG W M +WG W+ Sbjct: 83 GSSGGGGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVS--------------LYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIWR 281
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.766e-14 Identity = 59/195 (30.26%), Postives = 88/195 (45.13%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA------QYR-AGIVPISFRRIPCAKKGGIRFTV-----NGHSYFNLVLVTNVRGAGDVHSVSI--KGSKTGWQAMSRNWGPNWQ 684 W +G AT+Y Y Q + + AA S +++ +GL CGSCY++KC + C + V T+ CP GG C HFD++ AF +A Q R AG++ I + R+PC GG+ T + SYF VLV G GD+ + + G+ W M ++WG W+ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CSGNPVTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWK 219
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.604e-12 Identity = 59/192 (30.73%), Postives = 82/192 (42.71%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA-------QYRAGIVPISFRRIPCAKKGG--IRFTVN-GHSYFNLVLVTNVR-GAGDVHSVSIKGSKTG-WQAMSRNWGPNW 681 W AT+Y YG L T A+S LF G CG+CY+++C D C ++ V T+ CP GG C HFD++ AF ++A G + + +RR C K GG I F VN G + F L L+ G GD+ S+ +K + + WQ M WG W Sbjct: 45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRC-LDASICSRRAVTVIVTDECP---------GGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTAC-KYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATW 225
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXPB6_ORYSJ (Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.853e-12 Identity = 61/209 (29.19%), Postives = 88/209 (42.11%), Query Frame = 1 Query: 133 YGGGWQSGHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVNGHS---YFNLVLVTNVRGAGDVHSVSIKGSKTG-------WQAMSRNWGPNWQSNS 693 YG GW AT+Y G N+ + + T+ + +F +G CGSCY+++C DP C ++I+T N+ P HFD++ AF +A+ +GI+ I FRR+PC G I F V S YF VLV GDV V + SK+ W M +WG W+ +S Sbjct: 40 YGSGWLPARATWYGAPTGAGPDDNGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPS-CSGNIETVIITDMNYYP--------------VARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVYF-AVLVEYEDLDGDVVQVDLMESKSAYGGATGVWTPMRESWGSIWRLDS 232
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.898e-11 Identity = 56/198 (28.28%), Postives = 86/198 (43.43%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWC-LPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVNGHS---YFNLVLVTNVRGAGDVHSVSI-KGSKTGWQAMSRNWGPNWQSNS 693 W+ AT+Y G N + + T+ + +F +G CGSCY+++C N P P ++I+T N+ P + HFD++ AF +A+ AGI+ I F+R+PC G + F V S YF VLV G GDV V + + + W M +WG W+ +S Sbjct: 42 WEVARATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPACSGNPETVIITDMNYYPVS--------------KYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVYF-AVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDS 224
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.898e-11 Identity = 53/191 (27.75%), Postives = 80/191 (41.88%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYS-QGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA-------QYRAGIVPISFRRIPCAKKG-GIRFTVNGHS--YFNLVLVTNVRGAGDVHSVSIK-GSKTGWQAMSRNWGPNW 681 W AT+Y YG L + A++ LF NG CG+CY+++C D C ++ V T+ CP C+ HFD++ F ++A G++P+ +RR C +G I F VN S ++ +LV G GD+ S+ I+ W M WG NW Sbjct: 36 WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRC-LDKSICSRRAVTVIITDECP-----------GCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 214
BLAST of DY259984 vs. ExPASy Swiss-Prot
Match: EXB10_MAIZE (Expansin-B10 OS=Zea mays GN=EXPB10 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.898e-11 Identity = 56/201 (27.86%), Postives = 90/201 (44.78%), Query Frame = 1 Query: 133 YGGGWQSGHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKGGIRFTVN---GHSYFNLVLVTNVRGAGDVHSVSI--KGSKTGWQAMSRNWGPNWQSNS 693 YG W AT+Y Y ++ + + A + +F +GL CGSC+E+KC+ P C ++V T+ +A HFD+A AF +A+ +AGI+ + FRR+ C + F + G +Y L LV V G GD+ +V + KGS T ++ + +WG W+ +S Sbjct: 46 YGKDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKCDK-PVECSGKPVVVHITDMNYEPIA------------AYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYDSKVTFHLEKGCGPNYLAL-LVKYVDGDGDIVAVDVKEKGSDT-YEPLKHSWGAIWRKDS 231 The following BLAST results are available for this feature:
BLAST of DY259984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259984 ID=DY259984; Name=DY259984; organism=Citrus clementina; type=EST; length=995bpback to top |