DY259988

Overview
NameDY259988
Unique NameDY259988
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1032
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_MYCBP (Glucose-1-phosphate adenylyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=glgC PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.832e-20
Identity = 76/293 (25.94%), Postives = 131/293 (44.71%), Query Frame = 1
Query:   13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP---TANDFGSEIIPASANEQFLKAYLFND------------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDA--EVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVII 840
            D +++   DH+YRMD    V+ H  SGA  T++ + +    A+ FG +  ++ GR+ SF EKP          DTT                SMG Y+F  ++L++ +R       + +D G +I+P    +     Y F+D            YW D+GT+ +F++A++ L +  P+F+ Y+   PI     NL P                 F+     + SVVG  S I+A   ++++++    + +  A  E + + P  RV    G    ++  ILDKN  +G   ++
Sbjct:  119 DYIVVFGADHVYRMDPEQMVRFHIDSGAGATVAGIRVPRENATAFGCIDADDSGRIRSFVEKPLEPPGTPDDPDTT--------------FVSMGNYIFTTKVLIDAIRADADDDHSDHDMGGDIVPRLVADGMAAVYDFSDNEVPGATDRDRAYWRDVGTLDAFYDAHMDLVSVHPVFNLYNKRWPIRGESENLAP---------------AKFVNGGSAQESVVGAGSIISA-ASVRNSVLSSNVVVDDGAIVEGSVIMPGTRV----GRGAVVRHAILDKNVVVGPGEMV 377          
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_MYCBO (Glucose-1-phosphate adenylyltransferase OS=Mycobacterium bovis GN=glgC PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.832e-20
Identity = 76/293 (25.94%), Postives = 131/293 (44.71%), Query Frame = 1
Query:   13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP---TANDFGSEIIPASANEQFLKAYLFND------------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDA--EVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVII 840
            D +++   DH+YRMD    V+ H  SGA  T++ + +    A+ FG +  ++ GR+ SF EKP          DTT                SMG Y+F  ++L++ +R       + +D G +I+P    +     Y F+D            YW D+GT+ +F++A++ L +  P+F+ Y+   PI     NL P                 F+     + SVVG  S I+A   ++++++    + +  A  E + + P  RV    G    ++  ILDKN  +G   ++
Sbjct:  119 DYIVVFGADHVYRMDPEQMVRFHIDSGAGATVAGIRVPRENATAFGCIDADDSGRIRSFVEKPLEPPGTPDDPDTT--------------FVSMGNYIFTTKVLIDAIRADADDDHSDHDMGGDIVPRLVADGMAAVYDFSDNEVPGATDRDRAYWRDVGTLDAFYDAHMDLVSVHPVFNLYNKRWPIRGESENLAP---------------AKFVNGGSAQESVVGAGSIISA-ASVRNSVLSSNVVVDDGAIVEGSVIMPGTRV----GRGAVVRHAILDKNVVVGPGEMV 377          
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_FRAAA (Glucose-1-phosphate adenylyltransferase OS=Frankia alni (strain ACN14a) GN=glgC PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.832e-20
Identity = 75/286 (26.22%), Postives = 125/286 (43.71%), Query Frame = 1
Query:   13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRV-PSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP---TANDFGSEIIPASANEQFLKAYLFND------------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARI 822
            D V++   DH+YRMD    V  H  SGA +T++ L +       FG+++   +GR+  +F EKP          D   L  S +E       ASMG Y+F  ++L++ LR       + +D G +IIP    ++    Y F+D            YW D+GT+ S+F+A + L A  P+F+ Y+   PI+TS  +LPP                S +++  I          ++        + PG  +        ++  +  V   +G    +++ ILDKN  +
Sbjct:  118 DIVVVFGADHVYRMDPRQMVAQHLDSGAGVTVAGLRVPRAEGRSFGVIQTGRDGRIIEAFLEKP---------ADPPGLPGSPEET-----FASMGNYVFSTDVLIDALRKDAADEDSRHDMGGDIIPMLVAQRAAAVYDFSDNVVPGTTARDRGYWRDVGTLDSYFDAQMDLCALDPVFNLYNREWPIFTSVPSLPPAKFVHDDPRRTGIAINSIVSNGVI----------VSGGTVRSAVLSPGVRINSWAEVDRAVVLDNAV---VGRGAVVRDAILDKNVHV 376          
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_DEIRA (Glucose-1-phosphate adenylyltransferase OS=Deinococcus radiodurans GN=glgC PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.698e-20
Identity = 62/197 (31.47%), Postives = 95/197 (48.22%), Query Frame = 1
Query:   13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRF---PTANDFGSEIIPASANEQF-LKAYLF-----------NDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 558
            D V I SGDH+Y+M+    ++ H ++ AD+TI+  PM   +A  FG+M+++   RV  F EK           D +              + SMG Y+F +  L  LL        T  DFG  +IP + ++ + ++AY F           N YW D+GT+ ++FEAN+ L +  P F  Y+   P+ TS    PP
Sbjct:  122 DYVAIFSGDHIYKMNVEHMLEKHIETRADVTIAAYPMPQSQAHQFGVMQVDERWRVTEFHEKVPDPPTIPGQADLS--------------LTSMGNYIFSRRALEELLEASISGQETGYDFGHNVIPRALSDGYHVQAYDFHKNPIPGQERPNTYWRDVGTLDAYFEANMDLVSVNPEFDIYNPEWPLRTSSEFSPP 304          
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_DEIGD (Glucose-1-phosphate adenylyltransferase OS=Deinococcus geothermalis (strain DSM 11300) GN=glgC PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.698e-20
Identity = 65/197 (32.99%), Postives = 96/197 (48.73%), Query Frame = 1
Query:   13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTAN---DFGSEIIP-ASANEQFLKAYLF-----------NDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 558
            D V I SGDH+Y+M+    +Q H  + AD+TI+  PM   RA  FG+M++++  RV  F EKP+         DT+              + SMG Y+F +  L  LL           DFG  ++P A A+   ++AY F           N YW D+GT+ ++FEA++ L +  P F  Y+   P+ TS    PP
Sbjct:  122 DYVAIFSGDHIYKMNVEHMLQAHMDARADVTIAAYPMPRTRAHQFGVMQVDDRWRVTEFLEKPQDPPGLPGDPDTS--------------LTSMGNYIFSRRALEELLHTSISGEGEGFDFGHNVLPRALADGYHVQAYDFHRNPIPGQSSPNLYWRDVGTLDAYFEASMDLVSVNPEFDIYNPQWPLRTSSEFSPP 304          
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_VIBFM (Glucose-1-phosphate adenylyltransferase OS=Vibrio fischeri (strain MJ11) GN=glgC PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.830e-20
Identity = 78/288 (27.08%), Postives = 126/288 (43.75%), Query Frame = 1
Query:   13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLL---RWRFPTANDFGSEIIPASANEQFLKAYLFND----------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXH-----GSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARI 822
            + V I   DH+Y+MD    +  H++  A +T+S L M  + AS FG+++++  G++  F EKP     K +     +             + SMG Y+F+ E L   L        +++DFG +IIP    E  +  Y F+           YW D+GTI S++EA++ L      FS Y+   P++T    LPP                    GS+I  S IE SV+G RS I +   + ++++ G                    V +G+   ++  I+DK A I
Sbjct:  116 EHVCIFGSDHIYKMDIRQMLDFHKKKKAALTVSALRMPAKDASGFGVIEVDEHGKMIGFEEKPSNP--KCIPGQPGIA------------LVSMGNYIFEAESLCKELIHDAALEDSSHDFGKDIIPKMFPEGNVYVYDFSTNHITGEKKEVYWRDVGTIESYWEAHMDLLKKDAPFSLYNRKWPLHTYYPPLPPATFSDSDNGRVQIIDSLVCGGSYIRGSRIEKSVLGFRSNIASACDISESILLG-------------------NVKVGKGCVLRRVIVDKGADI 370          
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_VIBF1 (Glucose-1-phosphate adenylyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=glgC PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.830e-20
Identity = 78/288 (27.08%), Postives = 126/288 (43.75%), Query Frame = 1
Query:   13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLL---RWRFPTANDFGSEIIPASANEQFLKAYLFND----------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXH-----GSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARI 822
            + V I   DH+Y+MD    +  H++  A +T+S L M  + AS FG+++++  G++  F EKP     K +     +             + SMG Y+F+ E L   L        +++DFG +IIP    E  +  Y F+           YW D+GTI S++EA++ L      FS Y+   P++T    LPP                    GS+I  S IE SV+G RS I +   + ++++ G                    V +G+   ++  I+DK A I
Sbjct:  116 EHVCIFGSDHIYKMDIRQMLDFHKKKKAALTVSALRMPAKDASGFGVIEVDEHGKMIGFEEKPSNP--KCIPGQPGIA------------LVSMGNYIFEAESLCKELIHDAALEDSSHDFGKDIIPKMFPEGNVYVYDFSTNHIKGEKKEVYWRDVGTIESYWEAHMDLLKKDAPFSLYNRKWPLHTYYPPLPPATFSDSDNGRVQIIDSLVCGGSYIRGSRIEKSVLGFRSNIASACDISESILLG-------------------NVKVGKGCVLRRVIVDKGADI 370          
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_AZOSB (Glucose-1-phosphate adenylyltransferase OS=Azoarcus sp. (strain BH72) GN=glgC PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.830e-20
Identity = 77/286 (26.92%), Postives = 123/286 (43.01%), Query Frame = 1
Query:   13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKP-----YIASMGVYLFKKEILLN-LLRWRFPTANDFGSEIIPASANEQFLKAYLFN-------------DYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKN 813
            D V++   DH+YRMD    VQ H  + AD T++ +P+   + S FG+++ ++ GR+  F EKP                   Q AE  P      +ASMG Y+F  ++L++ L R      +DFG  ++PA      L AY F+              YW D+GTI +++ A+       P F   +   PIY +                    H   I S+ +   V+  R+ I  ++  ++ ++      E  AEVA      R  +G G   KI+  I+D+N
Sbjct:  120 DLVVVFGADHVYRMDIRQMVQYHVDTHADATVAAIPIPLEQVSSFGIIRTDSAGRIRDFQEKP-------------------QSAEPMPNRPGVALASMGNYVFSTDVLVDALTRAHSKGGHDFGKNLLPAMCESHRLMAYDFSSNRVPGIRDFEDASYWRDVGTIDAYYAAHFDTLGECPAFCMSNPRWPIYAA-----------PDQTEAAQVHDGHIRSASLGAGVLVRRATIERSLIRREVVV------EEGAEVADSIVMDRTVIGAG--AKIRRAIIDQN 367          
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_CORJK (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium jeikeium (strain K411) GN=glgC PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.309e-20
Identity = 78/295 (26.44%), Postives = 137/295 (46.44%), Query Frame = 1
Query:   13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTAN---DFGSEIIPASANEQFLKAYLFND------------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRR-NLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRV---PVGIGENTKIKECILDKNARIGKNVII 840
            D +++   DH+YRMD    VQ H ++GA +T++ L +    A+ FG+++ +++ ++  F EKP   +  ++  D  V              ASMG Y+F  + L++ L+      N   D G +IIP   +      Y F++            YW D+GT+ +F+EA++ L +  P+F+ Y+   PI+T+   NLPP                 F+     + S+V     I+A   ++++++    + E  A V     EG V    V IG    ++  I+DKN ++    II
Sbjct:  119 DYIIVFGADHVYRMDPEQMVQEHIKAGAGVTVAGLRVPRHEATAFGVIQADDDNKIEQFLEKP--AEPPSVPDDPEV------------SFASMGNYVFTAQTLIDALKEDSEDENSNHDMGGDIIPRLVDRGEAYVYDFSNNYVPGETERDKGYWRDVGTVDAFYEAHMDLISVHPVFNLYNQQWPIHTAETGNLPP---------------AKFVKGGIAQSSMVSAGCIISAGT-VRNSVLSENVVVEEGASV-----EGCVIMPGVRIGRGAVVRHAIIDKNVQVSAGEII 378          
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_MYCPA (Glucose-1-phosphate adenylyltransferase OS=Mycobacterium paratuberculosis GN=glgC PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.239e-20
Identity = 75/293 (25.60%), Postives = 130/293 (44.37%), Query Frame = 1
Query:   13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP---TANDFGSEIIPASANEQFLKAYLFND------------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDA--EVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVII 840
            D +++   DH+YRMD    V+ H  SGA  T++ + +    A+ FG +  +  GR+  F EKP          +TT                SMG Y+F  ++L++ +R       + +D G +IIP   ++     Y F+D            YW D+GT+ +F++A++ L +  P+F+ Y+   PI     NL P                 F+     + SVVG  S I+A   ++++++    + +  A  E + + P  RV    G    ++  ILDKN  +G   ++
Sbjct:  119 DYIVVFGADHVYRMDPEQMVRLHIDSGAGATVAGIRVPRSEATAFGCIDSDESGRIRKFVEKPLDPPGTPDDPETT--------------FVSMGNYIFTTKVLIDAIRADADDDHSDHDMGGDIIPRLVDDGMAAVYDFSDNEVPGATDRDRGYWRDVGTLDAFYDAHMDLVSVHPVFNLYNKRWPIRGESENLAP---------------AKFVNGGSAQESVVGAGSIISA-ASVRNSVLSSNVVVDDGAIVEGSVIMPGARV----GRGAVVRHAILDKNVVVGPGEMV 377          
The following BLAST results are available for this feature:
BLAST of DY259988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
GLGC_MYCBP2.832e-2025.94Glucose-1-phosphate adenylyltransferase OS=Mycobac... [more]
GLGC_MYCBO2.832e-2025.94Glucose-1-phosphate adenylyltransferase OS=Mycobac... [more]
GLGC_FRAAA2.832e-2026.22Glucose-1-phosphate adenylyltransferase OS=Frankia... [more]
GLGC_DEIRA3.698e-2031.47Glucose-1-phosphate adenylyltransferase OS=Deinoco... [more]
GLGC_DEIGD3.698e-2032.99Glucose-1-phosphate adenylyltransferase OS=Deinoco... [more]
GLGC_VIBFM4.830e-2027.08Glucose-1-phosphate adenylyltransferase OS=Vibrio ... [more]
GLGC_VIBF14.830e-2027.08Glucose-1-phosphate adenylyltransferase OS=Vibrio ... [more]
GLGC_AZOSB4.830e-2026.92Glucose-1-phosphate adenylyltransferase OS=Azoarcu... [more]
GLGC_CORJK6.309e-2026.44Glucose-1-phosphate adenylyltransferase OS=Coryneb... [more]
GLGC_MYCPA8.239e-2025.60Glucose-1-phosphate adenylyltransferase OS=Mycobac... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259988 ID=DY259988; Name=DY259988; organism=Citrus clementina; type=EST; length=1032bp
AATAAAGTAATTGATGATGTCCTGATTCTATCTGGGGATCACTTGTATAG
AATGGACTATATGGACTTTGTCCAGAATCATCGGCAGAGTGGTGCAGACA
TCACTATCTCTTGTCTGCCTATGGACGACCGTCGTGCCTCAGATTTTGGT
CTGATGAAAATTAACAACGAGGGAAGAGTCCCTTCTTTCAGTGAAAAGCC
TAAAGGGAAAGACTTGAAAGCAATGGCAGTAGATACAACAGTTTTGGGAC
TTTCTAAACAAGAGGCTGAAGAGAAGCCATACATTGCTTCCATGGGTGTG
TATCTCTTCAAAAAGGAGATACTTCTTAATCTTTTGAGATGGCGTTTTCC
AACTGCGAATGACTTTGGATCAGAAATAATCCCTGCATCAGCCAATGAAC
AATTCTTAAAGGCTTATCTGTTCAATGATTACTGGGAAGATATAGGAACC
ATCAGATCCTTCTTCGAGGCAAATCTTGCCCTCACTGCGCATCCACCGAT
GTTTAGTTTCTATGATGCCACAAAGCCCATCTACACGTCTCGAAGAAACC
TACCACCATCGAAGATTGATGATAGCAAGATTGTTGATTCCATCATATCA
CATGGAAGTTTCATAACAAGCAGCTTCATAGAACACAGTGTCGTTGGCAT
CAGATCTCGAATCAATGCTAACGTTCACTTAAAGGATACCATGATGCCTG
GAGCTGACCTTTACGAGACAGACGCTGAAGTAGCCTCACTACAACCTGAG
GGGAGAGTTCCCGTTGGAATTGGTGAAAACACAAAAATAAAAGAGTGCAT
CCTTGACAAAAATGCCCGAATAGGGAAAAATGTTATTATTGCCAATTTCG
AAGGGCTCCCAAAAGGCTGATAAATCCGCCAAAGGGTTTCCCCTCCCGCC
CCGGGGTTTCCCCGTCTTATTAAAAATTCCCGTTTACCCCCCACCGAATT
GGGAATATAAAAAAAATTTTCCCCTCCCCCCCCTCTTTTGCTTGAATTTG
GGGGTGCCACCCAAAAAAATCTTTTAAAGGAA
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