DY259988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_SHEFN (Glucose-1-phosphate adenylyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=glgC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.454e-26 Identity = 72/191 (37.70%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRW---RFPTANDFGSEIIPASANEQFLKAYLFND-------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 558 V+ILSGDH+YRMDY + H +SGA++T+ CL D A FG+M++++E RV F EKP + K++ D T+ +ASMG Y+F + L L+ + DFG +IIPA + A+ F+ YW D+GT+ SFF+AN+ L P + YDA PI+T + LPP Sbjct: 129 VMILSGDHIYRMDYAGLLAAHAESGAEMTVCCLETPIDEAAGAFGVMEVDSEHRVIGFEEKPA--EPKSIPSDPTMC------------LASMGNYVFNTKFLFEQLKKDANNEKSDRDFGKDIIPAIIENHKVFAFPFSSAVAGQPSYWRDVGTLDSFFQANMELLLPTPPLNLYDAKWPIWTYQEQLPP 305
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB9 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS195) GN=glgC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.454e-26 Identity = 70/191 (36.65%), Postives = 101/191 (52.88%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLR---WRFPTANDFGSEIIPASANEQFLKAYLFND-------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 558 V++LSGDH+YRMDY + H +SGAD+T+SCL + A FG+M+++ E R+ F EKP L + +ASMG Y+F E L + L+ + DFG +IIPA + + AY F YW D+GT+ SF++AN+ L + P + YDA PI+T + LPP Sbjct: 129 VMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEVDEEMRILGFEEKP--------------LQPKHSPGNPEMCLASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPP 305
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_NITMU (Glucose-1-phosphate adenylyltransferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=glgC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.454e-26 Identity = 82/283 (28.98%), Postives = 129/283 (45.58%), Query Frame = 1 Query: 13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTAN---DFGSEIIPASANEQFLKAYLFND----------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARI 822 D VLIL GDH+Y+MDY + +H A++TI+C+ + AS FG+M + +GRV F+EKP +V T V G + SMG+Y+F + L + L N DFG ++IP + + F+D YW D+GT+ +++EANL L P + YD PI+T + LPP S ++ I RS + +NV ++ + E + + P V +G N +++ ++DKN I Sbjct: 130 DYVLILGGDHVYKMDYAKLLADHIAKSAEMTIACIDLPLEEASAFGVMSVTKDGRVTDFTEKP--------SVPTAVPGRPGYA------LVSMGIYVFNADFLFDQLIRDHDDPNSSHDFGKDLIPHLVPRSRVFTHRFSDSCVNMVSGVPYWRDVGTVEAYWEANLDLVQVTPDLNLYDQDWPIWTHQEQLPPAKFVFDNDDRRGQALDSMVSGGCIISGATVRRSLLFSNVQVRSYSV---------LEDSVILPN----VDVGRNARLRRVVVDKNCII 385
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_GEOTN (Glucose-1-phosphate adenylyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glgC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.454e-26 Identity = 81/256 (31.64%), Postives = 123/256 (48.05%), Query Frame = 1 Query: 13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEIL---LNLLRWRFPTANDFGSEIIPASANE-QFLKAYLFNDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDT-MMPGADLYE-TDAEVASLQPEGRVP 762 D VL+LSGDH+Y+MDY + H AD+TIS + + AS FG+M N E + F+EKP AE K +ASMG+Y+F +L L + +++DFG ++IP E + L AY F YW+D+GT++S +EAN+ L +D + IY+ N PP + + +E SV+ RI +K++ +MPGA + E E A + P+ +P Sbjct: 119 DYVLVLSGDHIYKMDYQHMLDYHIAKQADVTISVIEVPWEEASRFGIMNTNEEMEIVEFAEKP---------------------AEPKSNLASMGIYIFNWPLLKQYLQIDNANPHSSHDFGKDVIPMLLREKKRLFAYPFEGYWKDVGTVKSLWEANMDLLDENNELDLFDRSWRIYSVNPNQPPQYISPEAEVSDSLVNEGCVVEGTVERSVLFQGVRIGKGAVVKESVIMPGAAVSEGAYVERAIVTPDSVIP 353
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB8 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS185) GN=glgC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 4.511e-26 Identity = 69/191 (36.13%), Postives = 101/191 (52.88%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLR---WRFPTANDFGSEIIPASANEQFLKAYLFND-------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 558 V++LSGDH+YRMDY + H +SGAD+T+SCL + A FG+M+++ E R+ F EKP+ + +ASMG Y+F E L + L+ + DFG +IIPA + + AY F YW D+GT+ SF++AN+ L + P + YDA PI+T + LPP Sbjct: 129 VMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEVDEEMRILGFEEKPQQP--------------KHSPGNPEMCLASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPP 305
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB2 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS223) GN=glgC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 4.511e-26 Identity = 69/191 (36.13%), Postives = 101/191 (52.88%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLR---WRFPTANDFGSEIIPASANEQFLKAYLFND-------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 558 V++LSGDH+YRMDY + H +SGAD+T+SCL + A FG+M+++ E R+ F EKP+ + +ASMG Y+F E L + L+ + DFG +IIPA + + AY F YW D+GT+ SF++AN+ L + P + YDA PI+T + LPP Sbjct: 129 VMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEVDEEMRILGFEEKPQQP--------------KHSPGNPEMCLASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPP 305
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_SERP5 (Glucose-1-phosphate adenylyltransferase OS=Serratia proteamaculans (strain 568) GN=glgC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 4.511e-26 Identity = 80/294 (27.21%), Postives = 132/294 (44.90%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT---ANDFGSEIIPASANEQFLKAYLFN-----------DYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP------XXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVII 840 V+IL+GDH+Y+MDY + +H + GA T++CLP+ AS+FG+M+++ + F EKP D + +ASMG+Y+F + L LL T +DFG ++IP ++ A+ F YW D+GT+ +++ ANL L + P YD PI T LPP G ++ S + HSV+ R R+N+ + T+ L P+ V +G + +++ CI+D+ I + ++I Sbjct: 136 VVILAGDHIYKMDYSRMLIDHVEKGAQCTVACLPVPRDEASEFGVMEVDENDLILEFLEKPSNPPPMPGNPDMS--------------LASMGIYIFNADYLFQLLEEDMSTPGSTHDFGKDLIPKITAQKAAWAHPFTLSCVTSNPELPPYWRDVGTLEAYWRANLDLASVTPELDMYDRAWPIRTHMEPLPPAKFVQDRSGSHGMTMNSLVSGGCIVSGSVVVHSVLFPRVRVNSFCTIDSTV---------------LLPD----VNVGRSCRLRRCIIDRACHIPEGMVI 396
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_GEOMG (Glucose-1-phosphate adenylyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.694e-26 Identity = 89/302 (29.47%), Postives = 137/302 (45.36%), Query Frame = 1 Query: 13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLR--WRFPTANDFGSEIIPAS-ANEQFLKAYLFND------------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFI------TSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVIIANFEG 855 D V I GDH+YRMD + HR++ ADITI+ L + A FG+ ++++ RV +F EKP A T+ G + ASMG Y+F L+ +L+ + DFG +IP A + + AY FND YW+D+GTI S++EAN+ L P + Y+ PI T++ N PP S++ + S + S+VG +++N+ ++D++ L+E V +G N KI+ I+DKN I I G Sbjct: 124 DYVAIFGGDHIYRMDVSQMIGYHRRNRADITIAALEVPVEEARRFGVFCVDDDNRVTAFEEKP--------ANPVTIPG-------RETCFASMGNYIFSTRRLIEVLQEGKKLHADLDFGKHVIPMMLAKKDRVFAYNFNDNLIPGMKPEERGYWKDVGTIDSYYEANMELIHVSPQLNLYNYKWPILTNQGNYPPAKTVFDEDGRRGMNIDSYVCAGCITSGSVVRRSIVGPLTKVNSYSLVEDSI-----LFEN--------------VNVGRNVKIRRAIIDKNITIPDGTTIGYDHG 391
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_CLOAB (Glucose-1-phosphate adenylyltransferase OS=Clostridium acetobutylicum GN=glgC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.694e-26 Identity = 85/285 (29.82%), Postives = 132/285 (46.32%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRF---PTANDFGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADL-YETDAEVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVIIANFEGL 858 V+ILSGDH+Y+M+Y++ + H++ AD TI+ + AS FG+M + + R+ F EKPK + K +ASMG+Y+F L L + NDFG IIP N ++ L AY FN YW+D+GTI+S +EAN+ L + YD IY+ +PP +S ++ S+V + I + PG + +T + + P V +G N IK+ I+ NAR+ NVI+ + + Sbjct: 122 VVILSGDHIYKMNYLEMLDFHKKKNADATIAVFEVPLNEASRFGIMNTDEDDRINEFEEKPK---------------------KPKNNLASMGIYIFNWRFLKRFLEEDARDESSNNDFGKNIIPNMLNKKRKLYAYRFNGYWKDVGTIQSLWEANMDLLDDNNSLNIYDPKWKIYSVNPTMPPQY---------------IACNSDVKRSLV-VEGCIVLGKVYNSVLFPGVYIGRDTIITNSVIMPN----VIVGNNVIIKKSIIGSNARVDDNVIVGTNDNI 365
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_ANADF (Glucose-1-phosphate adenylyltransferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.694e-26 Identity = 81/295 (27.46%), Postives = 135/295 (45.76%), Query Frame = 1 Query: 25 ILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILL-NLLRWRFPT--ANDFGSEIIPASANEQFLKAYLF------------NDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXH--------GSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVII 840 I DH+YRMD +Q H+ GAD+T++ +P+ AS+FG+++++ +GR+ F EKPK G+ + +ASMG YLF + L+ ++R T A+DFG I+ A + + Y F YW D+G++ ++++AN+ L P FS Y+ PI+T++ N PP + G I+ H ++ + RIN+ ++D++ L+E V IG + KI+ I+DK+ I N I Sbjct: 120 IFGADHVYRMDVRQMLQFHQDKGADLTVAAIPVPVEEASEFGIIEVDGDGRMIGFVEKPKA-------------GVKTMPGDPTRALASMGNYLFTTDALVQEIVRDAGDTKSAHDFGKSIVAAMYERKRVFVYDFAKNVVPGQGDKERGYWRDVGSLDAYYQANMDLVDVDPSFSLYNDRWPIFTAQHNFPPVKFVFNNQTEGRVGYATDSLVSEGCIISGGHAHHCILSPKVRINSYSLVEDSI-----LFEN--------------VNIGRHCKIRRAIVDKHVEIPANTTI 382 The following BLAST results are available for this feature:
BLAST of DY259988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 310
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259988 ID=DY259988; Name=DY259988; organism=Citrus clementina; type=EST; length=1032bpback to top |