DY259989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL3_ORYSI (Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. indica GN=SPL3 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.178e-24 Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 404 VDLKLGQVNSSAED---SLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 + LKLG+ + ED N P + +PSP G K+ + A +Q C V+GC+ DLS+ + YHR H+VCE HSKT +V++ G ++RFCQQCSRFH L EFD+ +R+CR+RL HN ++ Sbjct: 131 IGLKLGK-RTYFEDVCGGQNVKSSPSGVSVATPSP-GLAKKVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSRFHGLAEFDQKKRSCRRRLHDHNARR 253
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SBP1_ANTMA (Squamosa promoter-binding protein 1 OS=Antirrhinum majus GN=SBP1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.178e-24 Identity = 58/131 (44.27%), Postives = 82/131 (62.60%), Query Frame = 2 Query: 377 SSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 +S+ +G + L Q ED + + + K + +PSG KRA +GS SC V+ C ++++N + YHR HKVCE H+K P VL G +QRFCQQCSRFH L EFDE +R+CR+RL GHN+++ Sbjct: 3 TSKGEGKRVIKLPGSQEQGEEEDDIGE----DSKKTRALTPSG--KRA----SGSTQRSCQVENCAAEMTNAKPYHRRHKVCEFHAKAPVVLHSGLQQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERR 123
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL16_ARATH (Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.844e-24 Identity = 63/159 (39.62%), Postives = 82/159 (51.57%), Query Frame = 2 Query: 296 DWNLKP-AWDFTEFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 DW + WD FE + S + +DL L + E + P + K+ S SP G C VD C DLS +DYHR HKVCE+HSK + L+ Q QRFCQQCSRFH L EFDEG+R+CR+RL+GHN+++ Sbjct: 8 DWQMNRWKWDGQRFEAIELQG------ESLQLSNKKGLDLNLPCGFNDVEGTPVDLTRP-SKKVRSGSPGSG------GGGGGNYPKCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLDGHNRRR 153
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSJ (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.844e-24 Identity = 50/100 (50.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 470 GASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 G+ S G + G C VD C +DL+N +DYHR HKVCE+H KT + L+ Q QRFCQQCSRFH L EFDEG+R+CR+RL GHN+++ Sbjct: 159 GSPGSASGGGGGGGGGGNSGGGGGSYPMCQVDDCRADLTNAKDYHRRHKVCEIHGKTTKALVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRR 258
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSI (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.844e-24 Identity = 50/100 (50.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 470 GASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 G+ S G + G C VD C +DL+N +DYHR HKVCE+H KT + L+ Q QRFCQQCSRFH L EFDEG+R+CR+RL GHN+++ Sbjct: 159 GSPGSASGGGGGGGGGGNSGGGGGSYPMCQVDDCRADLTNAKDYHRRHKVCEIHGKTTKALVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRR 258
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL12_ARATH (Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.714e-24 Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = 2 Query: 539 SQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 S+ C VD C +DLS +DYHR HKVCE+HSK L+ G QRFCQQCSRFH LEEFDEG+R+CR+RL GHN+++ Sbjct: 122 SRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHNKRR 198
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL11_ARATH (Squamosa promoter-binding-like protein 11 OS=Arabidopsis thaliana GN=SPL11 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.714e-24 Identity = 59/147 (40.14%), Postives = 83/147 (56.46%), Query Frame = 2 Query: 329 EFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 +F Q P V +S+ + + LKLG+ S E E A M+ +PS +++ C +DGC+ DLS+ + YHR HKVCE HSK P+V + G ++RFCQQCSRFH + EFDE +R+CRKRL HN ++ Sbjct: 104 DFVQVKAPTALEVSVASAES----DLCLKLGKRTYSEEYWGRNNNEISAVSMKLLTPSVVAGKSKLCGQSMPVPRCQIDGCELDLSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARR 246
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL12_ORYSJ (Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. japonica GN=SPL12 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.851e-24 Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = 2 Query: 497 PSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 PS K+ + + +Q++ C V+GC DLS+ R+YHR HKVCE HSK P+V++ G ++RFCQQCSRFH L EFD+ +++CR+RL HN ++ Sbjct: 161 PSTVVKKMKVSQQSTQSSYCQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCRRRLSDHNARR 251
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL12_ORYSI (Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica GN=SPL12 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.851e-24 Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = 2 Query: 497 PSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 PS K+ + + +Q++ C V+GC DLS+ R+YHR HKVCE HSK P+V++ G ++RFCQQCSRFH L EFD+ +++CR+RL HN ++ Sbjct: 161 PSTVVKKMKVSQQSTQSSYCQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCRRRLSDHNARR 251
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL1_ARATH (Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 3.144e-23 Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 2 Query: 548 ASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQGNLSQIPCPDRN 805 A C V+ C++DLS +DYHR HKVCE+HSK + G QRFCQQCSRFH L+EFDEG+R+CR+RL GHN+++ + P + N Sbjct: 104 AVCQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTNPEPGANGN 189 The following BLAST results are available for this feature:
BLAST of DY259989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259989 ID=DY259989; Name=DY259989; organism=Citrus clementina; type=EST; length=946bpback to top |