DY259989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL4_ARATH (Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana GN=SPL4 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.321e-21 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 530 NNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 N G C VD C +D+ + YHR HKVCE+H+K V + G QRFCQQCSRFH L+EFDE +R+CR+RL GHN+++ Sbjct: 46 NRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERR 125
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL5_ORYSJ (Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica GN=SPL5 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.725e-21 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 524 AANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 AA + Q C +GC +DLS + YHR HKVC+ H+K VL G++QRFCQQCSRFH L EFDE +R+CRKRL HN+++ Sbjct: 197 AAAHHHQPPRCQAEGCKADLSAAKHYHRRHKVCDFHAKAAAVLAAGKQQRFCQQCSRFHVLAEFDEAKRSCRKRLTEHNRRR 278
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SBP2_ANTMA (Squamosa promoter-binding protein 2 OS=Antirrhinum majus GN=SBP2 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.725e-21 Identity = 55/148 (37.16%), Postives = 82/148 (55.41%), Query Frame = 2 Query: 326 TEFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 ++FE+E + +E K NF+ + + LN + G E + SG A+ CLV+ C +DL NC+ Y++ H+VCE+H+K P V + G QRFCQQCSRFH L EFD+ +R+CR+RL GHN+++ Sbjct: 24 SDFEEEEEGEDEEEEEQERVVKVNFAE-------SQLKKKKLNLGEGSGGKSGEKHTASGGGVVAQPC--------CLVENCGADLRNCKKYYQRHRVCEVHAKAPVVSVEGLMQRFCQQCSRFHDLSEFDQTKRSCRRRLAGHNERR 156
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL1_ORYSJ (Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.253e-21 Identity = 61/171 (35.67%), Postives = 90/171 (52.63%), Query Frame = 2 Query: 293 MDWNLKP-AWDFTEFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVN-----SSAEDSLNKCKEPGASKMESPSPSGSFKRA------RAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 ++W+L WD F A P+ + + S R G ++ G V+ S +D +C + + SG R+ R S C VDGC +LS+ RDY++ HKVCE+H+K+ V I + RFCQQCSRFH L+EFDEG+++CR RL HN+++ Sbjct: 10 LEWDLNDWRWDSNLFL--ATPSNASPSKCSRRELGRAEGEIDFGVVDKRRRVSPEDDDGEECINAATTNGDDGQISGQRGRSSEDEMPRQGTCSSSGPCCQVDGCTVNLSSARDYNKRHKVCEVHTKSGVVRIKNVEHRFCQQCSRFHFLQEFDEGKKSCRSRLAQHNRRR 178
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL10_ORYSJ (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica GN=SPL10 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.118e-20 Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 2 Query: 542 QTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 Q C +GC +DLS + YHR HKVCE H+K V G++QRFCQQCSRFH L EFDE +R+CRKRL HN+++ Sbjct: 177 QPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFHVLTEFDEAKRSCRKRLAEHNRRR 252
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL10_ORYSI (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica GN=SPL10 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.118e-20 Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 2 Query: 542 QTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 Q C +GC +DLS + YHR HKVCE H+K V G++QRFCQQCSRFH L EFDE +R+CRKRL HN+++ Sbjct: 177 QPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFHVLTEFDEAKRSCRKRLAEHNRRR 252
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL8_ORYSJ (Squamosa promoter-binding-like protein 8 OS=Oryza sativa subsp. japonica GN=SPL8 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.249e-20 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 2 Query: 536 GSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQ-KQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 G C +GC +DLS+ + YHR HKVCE HSK P V+ G QRFCQQCSRFH L+EFD+ +++CRKRL HN+++ Sbjct: 179 GHHPPRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFDDAKKSCRKRLADHNRRR 257
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL8_ORYSI (Squamosa promoter-binding-like protein 8 OS=Oryza sativa subsp. indica GN=SPL8 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.249e-20 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 2 Query: 536 GSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQ-KQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 G C +GC +DLS+ + YHR HKVCE HSK P V+ G QRFCQQCSRFH L+EFD+ +++CRKRL HN+++ Sbjct: 179 GHHPPRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFDDAKKSCRKRLADHNRRR 257
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: LG1_MAIZE (Protein LIGULELESS 1 OS=Zea mays GN=LG1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.249e-20 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 2 Query: 536 GSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQ-KQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 G C +GC +DLS+ + YHR HKVCE HSK P V+ G QRFCQQCSRFH L+EFD+ +++CRKRL HN+++ Sbjct: 179 GHHPPRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFDDAKKSCRKRLADHNRRR 257
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL11_ORYSJ (Squamosa promoter-binding-like protein 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.237e-19 Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 485 ESPSPSGSFKRARAANNGSQTAS-------CLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 +S S S S KR R+A A+ C V+GC +L ++Y+R H+VCE H+K +V++ GQ +RFCQQCSRFH EFD+ +R+CR+RL HN ++ Sbjct: 37 DSSSASASAKRGRSAAAAGDAAAVAAEAPRCQVEGCGLELGGYKEYYRKHRVCEPHTKCLRVVVAGQDRRFCQQCSRFHAPSEFDQEKRSCRRRLSDHNARR 138 The following BLAST results are available for this feature:
BLAST of DY259989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259989 ID=DY259989; Name=DY259989; organism=Citrus clementina; type=EST; length=946bpback to top |