DY259989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL17_ORYSJ (Squamosa promoter-binding-like protein 17 OS=Oryza sativa subsp. japonica GN=SPL17 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 2.109e-19 Identity = 51/135 (37.78%), Postives = 72/135 (53.33%), Query Frame = 2 Query: 410 LKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFK----RARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQGNLSQIPCPDR 802 LK G+ +D+ + S G K A AA C V+GC DLS + Y+ HKVC +H+K P V++ G +QRFCQQCSRFH L EFD+ +++CR+RL GHN+++ + P R Sbjct: 22 LKFGKKIYFEQDAAASASAAAVESSSTSSGGGGKKGKGVAAAAAPPPPLPPRCQVEGCGVDLSGVKPYYCRHKVCYMHAKEPIVVVAGLEQRFCQQCSRFHQLPEFDQEKKSCRRRLAGHNERRRKPTPGPLSSR 156
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL5_ARATH (Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana GN=SPL5 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.755e-19 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 554 CLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQGNLS 781 C VD C +L+ + Y+R H+VCE+H+K + G +QRFCQQCSRFH L EFDE +R+CR+RL GHN+++ +S Sbjct: 63 CQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHNERRRKIS 138
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL7_ARATH (Squamosa promoter-binding-like protein 7 OS=Arabidopsis thaliana GN=SPL7 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.671e-16 Identity = 45/148 (30.41%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 326 TEFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 T E E P+ + S R + D +L + S+ + + C P +++ + + GS A C V C++D+S + YH+ H+VC + V++ G+ +R+CQQC +FH L +FDEG+R+CR++LE HN ++ Sbjct: 70 TPAESELDPSPEESGSGSDRVRKR---DPRL--ICSNFIEGMLPCSCP---ELDQKLEDAELPKKKRVRGGSGVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRR 209
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL9_ORYSJ (Squamosa promoter-binding-like protein 9 OS=Oryza sativa subsp. japonica GN=SPL9 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.021e-15 Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 470 GASKMESPSPSGSFKRARAANNGSQTAS-----CLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 GA K + GS + G+ + C V GC++D+ + YHR H+VC + V++ G ++R+CQQC +FH L +FDE +R+CR++LE HN+++ Sbjct: 138 GARKKPKGAGRGSGAAVGGSGGGASRGTPAEMKCQVPGCEADIRELKGYHRRHRVCLRCAHAAAVMLDGVQKRYCQQCGKFHILLDFDEDKRSCRRKLERHNKRR 242 The following BLAST results are available for this feature:
BLAST of DY259989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259989 ID=DY259989; Name=DY259989; organism=Citrus clementina; type=EST; length=946bpback to top |