DY259990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: GSP1_ENCCU (GTP-binding nuclear protein GSP1 OS=Encephalitozoon cuniculi GN=GSP1 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.900e-36 Identity = 84/199 (42.21%), Postives = 117/199 (58.79%), Query Frame = 3 Query: 120 GGTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGK-IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQVTFH--RKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPNFDFVQSPAPAPPKVQNHFGCPATTMKLNLLPLASTPPPHE 704 GG GKTT++ R L G F+K Y T+G HP+ F + G I+F WDTAGQEK L+D YYI AI FDVT+R+T +N+ W ++ V N PIV+C NK+D+KNRQ +K++ + KN Y+EISAK+ +NF PFL+LAR G P+ FV + P +V + P + ++ + AS P E Sbjct: 16 GGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQEKKAVLKDVYYIGASGAIFFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARIFTGRPDLIFVSNVNLEPTEVNYDYHSPEESKYIDYMEQASKMAPEE 214
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB7A_RABIT (Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.147e-23 Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPNFDFVQSPAPAPPKVQNH 635 G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+PY+E SAK N E+ F +AR + + P P K+ + Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPMKLDKN 195
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB7A_RAT (Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 5.367e-23 Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPNFDFVQSPAPAPPKVQNH 635 G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+PY+E SAK N E+ F +AR + + P P K+ + Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKN 195
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB7A_PONAB (Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 5.367e-23 Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPNFDFVQSPAPAPPKVQNH 635 G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+PY+E SAK N E+ F +AR + + P P K+ + Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPKPIKLDKN 195
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB7A_MOUSE (Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 5.367e-23 Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPNFDFVQSPAPAPPKVQNH 635 G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+PY+E SAK N E+ F +AR + + P P K+ + Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKN 195
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB7A_HUMAN (Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 5.367e-23 Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPNFDFVQSPAPAPPKVQNH 635 G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+PY+E SAK N E+ F +AR + + P P K+ + Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKN 195
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB7A_CANFA (Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 5.367e-23 Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPNFDFVQSPAPAPPKVQNH 635 G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+PY+E SAK N E+ F +AR + + P P K+ + Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKN 195
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB7A_BOVIN (Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.562e-22 Identity = 58/178 (32.58%), Postives = 92/178 (51.69%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPNFDFVQSPAPAPPKVQNH 635 G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+PY+E SAK N E+ F + R + + P P K+ + Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVRNALKQETEVELYNEFPEPIKLDKN 195
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB7A_DICDI (Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 6.141e-19 Identity = 49/155 (31.61%), Postives = 82/155 (52.90%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQV---KAKQVTFHRKKNLPYYEISAKSNYNFEKPFLYLAR 563 G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C ++ +DV T++N+ +W + R +N P V+ GNK+D++N++V K K N+PY+E SAK N E+ F +AR Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLENQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIAR 172
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB7_SOYBN (Ras-related protein Rab7 OS=Glycine max PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.787e-18 Identity = 55/187 (29.41%), Postives = 93/187 (49.73%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLPYYEISAKSNYNFEKPFLYLAR-KLAGDPNFD--FVQSPAPAPPKVQNHFGC 644 G GKT+ + +++ +F ++Y+ TIG + + + + WDTAGQE+F L +Y C ++++DV ++ + WH + + P +L GNK+D+ +R V K+ K N+PY+E SAK +YN + FL +A+ LA + D F P A P+ + GC Sbjct: 18 GVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPFILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANEHEQDIYFQGIPEAAVPENEQRSGC 204 The following BLAST results are available for this feature:
BLAST of DY259990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 471
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259990 ID=DY259990; Name=DY259990; organism=Citrus clementina; type=EST; length=1143bpback to top |