DY259990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.334e-18 Identity = 59/181 (32.60%), Postives = 90/181 (49.72%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPN----FDFVQSPAPAPPKVQNHFGC 644 G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + + V SP P K ++ C Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTC 199
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 2.334e-18 Identity = 59/181 (32.60%), Postives = 90/181 (49.72%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPN----FDFVQSPAPAPPKVQNHFGC 644 G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + + V SP P K ++ C Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTC 199
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.334e-18 Identity = 59/181 (32.60%), Postives = 90/181 (49.72%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPN----FDFVQSPAPAPPKVQNHFGC 644 G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + + V SP P K ++ C Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTC 199
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB26_DROME (Ras-related protein Rab-26 OS=Drosophila melanogaster GN=Rab26 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 2.334e-18 Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKK-KYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDV--KNRQVKAKQ-VTFHRKKNLPYYEISAKSNYNFEKPFLYLARKL 569 G GKT+F+ ++ TGEF+ + T+G+ + + +++ WDTAGQE+F + YY ++++DVT + TY N+ W ++ E++ IVL GNK D RQVK + R+ N+P+ E SAK+ N E F +AR+L Sbjct: 200 GVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQL 353
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB9A_RAT (Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 3.048e-18 Identity = 51/157 (32.48%), Postives = 80/157 (50.96%), Query Frame = 3 Query: 120 GGTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-----CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKN--LPYYEISAKSNYNFEKPFLYLARKL 569 GG GK++ + R++T +F + TIGVE D + + WDTAGQE+F LR +Y C ++ F V +++N+ W ++ + E+ P V+ GNK D+K RQV ++ K N PY+E SAK + N F R++ Sbjct: 16 GGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRI 172
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB9A_MOUSE (Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.048e-18 Identity = 51/157 (32.48%), Postives = 80/157 (50.96%), Query Frame = 3 Query: 120 GGTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-----CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKN--LPYYEISAKSNYNFEKPFLYLARKL 569 GG GK++ + R++T +F + TIGVE D + + WDTAGQE+F LR +Y C ++ F V +++N+ W ++ + E+ P V+ GNK D+K RQV ++ K N PY+E SAK + N F R++ Sbjct: 16 GGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRI 172
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RABJ_DICDI (Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.981e-18 Identity = 60/167 (35.93%), Postives = 86/167 (51.50%), Query Frame = 3 Query: 78 LLIIPASNL*LSAIGGTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDV-KNRQVKAKQVTFHRKK-NLPYYEISAKSNYNFEKPFLYLARKL 569 L I S + L GKT R++ G F K+ TIG KI++ WD+AGQ++F L YY AI++FD+T + T+ V W +L + E I +VLCGNK+D+ +NRQVK++ + + N Y E SAK N E FL + +KL Sbjct: 4 LSISMESKVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDRFRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIGKKL 170
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB7_VIGAC (Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.981e-18 Identity = 54/187 (28.88%), Postives = 93/187 (49.73%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLPYYEISAKSNYNFEKPFLYLAR-KLAGDPNFD--FVQSPAPAPPKVQNHFGC 644 G GKT+ + +++ +F ++Y+ TIG + + + + WDTAGQE+F L +Y C ++ +DV ++ + WH + + + P +L GNK+D+ +R V K+ K N+PY+E SAK ++N + FL +A+ LA + D F P A P+ + GC Sbjct: 18 GVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANEHEQDIYFQGIPEAAVPENEQRSGC 204
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB23_HUMAN (Ras-related protein Rab-23 OS=Homo sapiens GN=RAB23 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 6.790e-18 Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = 3 Query: 120 GGTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD------VKNRQVKAKQVTFHRKKNLPYYEISAKSNYNFEKPFLYLARK 566 G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQE+F + YY Q +++F T R +++ V +W + +IP VL NK+D +KN + +A ++ L +Y S K + N + F YLA K Sbjct: 18 GAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDDSCIKNEEAEA----LAKRLKLRFYRTSVKEDLNVNEVFKYLAEK 168
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.370e-17 Identity = 59/197 (29.95%), Postives = 98/197 (49.75%), Query Frame = 3 Query: 129 GKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN--LPYYEISAKSNYNFEKPFLYLARKLAGDPNFDFVQSPAPAPPKVQNHFGCPATTMKLNLLPLASTPPPHEN 707 GKT V R +G F + TIGV+ + N K++ WDTAGQE+F + YY AII +D+T R ++++VP W + + N+ ++L GNK D+ + RQ+ ++ +K+ L E SAK ++N ++ FL +A++L F + H P + L+ P+ + P P +N Sbjct: 27 GKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKELIARNTFHY-------------HSESPRNSFMLDSKPVLAPPEPDKN 210 The following BLAST results are available for this feature:
BLAST of DY259990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 471
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259990 ID=DY259990; Name=DY259990; organism=Citrus clementina; type=EST; length=1143bpback to top |