DY259990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB18_DICDI (Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.281e-16 Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = 3 Query: 129 GKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC--ENIPIVLCGNKVDVKNRQVKAKQ-VTFHRKKNLPYYEISAKSNYNFEKPFLYLARKLAGDPNFDFVQSPAPAPPKVQN 632 GKT+ VKR F + TIGVE + + K+ WDTAGQEKF L YY I+ +DVT R ++ N+ W ++ N+ +L GNK+D +NR+V ++ F +KK + + E SAKS ++ F LA+K+ P Q+ + + PK +N Sbjct: 18 GKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFANRSNLVKLLVGNKIDKENREVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIP-----QNTSSSQPKQRN 183
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.672e-16 Identity = 59/185 (31.89%), Postives = 89/185 (48.11%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK------NLPYYEISAKSNYNFEKPFLYLARKLAG-----------DPNFDFVQSPAPAPPK 623 G GK+ + R + + + TIGV+ N I+ WDTAGQE+F + YY I+++DVT +LT++NV W +++ R CEN+ +L GNK D+ V K V F+ K +P+ E SAK + N E+ F+ +A ++ D N S AP PK Sbjct: 18 GVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDL----VAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDKNKVVPGSSAPISPK 198
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: YPTC5_CHLRE (GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.853e-16 Identity = 47/157 (29.94%), Postives = 80/157 (50.96%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLPYYEISAKSNYNFEKPFLYLAR 563 G GKT+ + +++ +F K+Y+ TIG + + + K+ WDTAGQE+F L +Y C +++FDV ++ ++ W + +N P ++ GNK+D +RQV K+ K ++PY+E SAK + N E F + R Sbjct: 18 GVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPFMVLGNKIDENGGSSRQVSEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITR 174
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB7_ARATH (Ras-related protein Rab7 OS=Arabidopsis thaliana GN=RAB7 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.853e-16 Identity = 51/172 (29.65%), Postives = 88/172 (51.16%), Query Frame = 3 Query: 123 GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRD-LCRVCEN----IPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLPYYEISAKSNYNFEKPFLYLAR-KLAGDPNFDFVQSP 605 G GKT+ + +++ +F ++Y+ TIG + + + + WDTAGQE+F L +Y C ++++DV +++++ WH + L R P +L GNKVD+ +R V K+ K N+ Y+E SAK +YN + FL + + LA + + D P Sbjct: 18 GVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANERDQDIYFQP 189
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB19_XENLA (Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.853e-16 Identity = 58/197 (29.44%), Postives = 97/197 (49.24%), Query Frame = 3 Query: 129 GKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN--LPYYEISAKSNYNFEKPFLYLARKLAGDPNFDFVQSPAPAPPKVQNHFGCPATTMKLNLLPLASTPPPHEN 707 GKT V R +G F + TIGV+ N K++ WDTAGQE+F + YY AII +D+T R ++++VP W + + N+ ++L GNK D+ + RQ+ ++ +K+ L E SAK ++N ++ FL +A++L F + H P + L+ P+ + P P ++ Sbjct: 27 GKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAGKYGAANLMLMLMGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKELIARNTFHY-------------HNESPRNSFILDSKPVLAPPEPDKS 210
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RB27B_BOVIN (Ras-related protein Rab-27B OS=Bos taurus GN=RAB27B PE=2 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 3.726e-16 Identity = 55/161 (34.16%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 108 LSAIG--GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCG----------KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL--CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLPYYEISAKSNYNFEK 542 L A+G G GKTTF+ R+ +F K+ T+G++ N K+ WDTAGQE+F L ++ ++MFD+T++ ++ NV W L CEN IVL GNK D+ + R+V +Q K ++PY+E SA + N EK Sbjct: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVAYNTQGPNGPTGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARDLAEKYSIPYFETSAATGQNVEK 172
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RB27B_HUMAN (Ras-related protein Rab-27B OS=Homo sapiens GN=RAB27B PE=1 SV=4) HSP 1 Score: 85.8853 bits (211), Expect = 4.866e-16 Identity = 55/161 (34.16%), Postives = 81/161 (50.31%), Query Frame = 3 Query: 108 LSAIG--GTGKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCG----------KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL--CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLPYYEISAKSNYNFEK 542 L A+G G GKTTF+ R+ +F K+ T+G++ N K+ WDTAGQE+F L ++ ++MFD+T++ ++ NV W L CEN IVL GNK D+ + R+V +Q K +PY+E SA + N EK Sbjct: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB5B_PONAB (Ras-related protein Rab-5B OS=Pongo abelii GN=RAB5B PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.866e-16 Identity = 53/150 (35.33%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 129 GKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LPYYEISAKSNYNFEKPFLYLARKL 569 GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N R V+ ++ + N L + E SAK+ N FL +A+KL Sbjct: 32 GKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB5B_MOUSE (Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.866e-16 Identity = 53/150 (35.33%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 129 GKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LPYYEISAKSNYNFEKPFLYLARKL 569 GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N R V+ ++ + N L + E SAK+ N FL +A+KL Sbjct: 32 GKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
BLAST of DY259990 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.866e-16 Identity = 53/150 (35.33%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 129 GKTTFVKRHLTGEFKKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LPYYEISAKSNYNFEKPFLYLARKL 569 GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N R V+ ++ + N L + E SAK+ N FL +A+KL Sbjct: 32 GKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181 The following BLAST results are available for this feature:
BLAST of DY259990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 471
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259990 ID=DY259990; Name=DY259990; organism=Citrus clementina; type=EST; length=1143bpback to top |