DY259991

Overview
NameDY259991
Unique NameDY259991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1388 contig Ccv1_Contig1388:1..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROM4 (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9211) GN=hisB PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.053e-60
Identity = 107/169 (63.31%), Postives = 133/169 (78.70%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R GEV RVTKETNV+V++ +DG G    ST + FLDHML QL+SHGLFD+ V A GD HIDDHHTNEDVG+AIG AL ++LG+R+GINRFG F+APLDEAL+ V LD SGRPHL+Y L IP+Q++G+Y T+LV+  F ++VN SG+   I+QL G NS HI+EA  KAF
Sbjct:    5 RTGEVHRVTKETNVTVRLGLDGKGKCKISTGVAFLDHMLQQLSSHGLFDLEVIAKGDTHIDDHHTNEDVGIAIGQALSESLGERQGINRFGHFSAPLDEALVQVVLDCSGRPHLSYGLNIPSQRIGSYETELVKEFFIAVVNNSGLTLHIRQLDGTNSHHIVEACFKAF 173          

HSP 2 Score: 33.8834 bits (76), Expect = 1.053e-60
Identity = 17/26 (65.38%), Postives = 19/26 (73.08%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR AT+L PRR   IP+ KG
Sbjct:  171 KAFARALRLATELDPRRGDAIPSSKG 196          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SYNY3 (Imidazoleglycerol-phosphate dehydratase OS=Synechocystis sp. (strain PCC 6803) GN=hisB PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.372e-60
Identity = 111/169 (65.68%), Postives = 132/169 (78.11%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R   V RVTKET+V V +N+ GSG+   +T +PFLDHML Q+ASHGL D+ V ATGDI IDDHHTNEDVG+ +G AL +ALGDR+GINRFG F APLDEAL+ V+LD SGRPHL+Y LQIPT++VGTY+TQLV   F ++VN S M   I+QL G NS HIIEAT KAF
Sbjct:   17 RAAAVHRVTKETDVRVSLNLMGSGLCHVATGVPFLDHMLHQIASHGLIDLEVNATGDIEIDDHHTNEDVGITLGQALAEALGDRRGINRFGHFIAPLDEALVQVTLDFSGRPHLSYGLQIPTERVGTYDTQLVREFFVAVVNHSQMTLHIRQLDGINSHHIIEATFKAF 185          

HSP 2 Score: 31.187 bits (69), Expect = 1.372e-60
Identity = 14/26 (53.85%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARA+R A ++ PRR   IP+ KG
Sbjct:  183 KAFARAMRMAIEVDPRRADTIPSSKG 208          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SYNS3 (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain CC9311) GN=hisB PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.373e-60
Identity = 105/169 (62.13%), Postives = 133/169 (78.70%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R GE+ RVT ET+VSV++ +DGSG   +ST +PFLDHML Q++SHGL D+ + A+GD HIDDHHTNEDVG+A G AL +ALGDR+GI RFG F APLDEAL+ V LD SGRPH+++ L IPTQK+GTY+T+LV+  F ++VN SG+   I+QL G NS HI+EA  KAF
Sbjct:    2 RTGEIHRVTGETDVSVRLGLDGSGRCQASTGVPFLDHMLHQISSHGLIDLEITASGDTHIDDHHTNEDVGIAFGQALSKALGDRRGIYRFGHFVAPLDEALVQVVLDCSGRPHISWGLTIPTQKIGTYDTELVKEFFVAVVNNSGLTLHIRQLDGVNSHHIVEACFKAF 170          

HSP 2 Score: 34.6538 bits (78), Expect = 1.373e-60
Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K F+RALR AT++ PRR G +P+ KG
Sbjct:  168 KAFSRALRMATEIDPRRSGLVPSSKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SYNR3 (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain RCC307) GN=hisB PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 3.043e-60
Identity = 106/170 (62.35%), Postives = 131/170 (77.06%), Query Frame = 3
Query:  309 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            GR G + RVT ET V V I +DGSG  + ST +PFLDHML QLASHGLFD+ + ATGD HIDDHHTNEDVG+A+G AL QAL DR+GI+RFG F APLDEAL+ V+LD SGRPH++Y L IP QK+G+Y+T+LV+  F ++ N +G+   I+QL G NS HI+EA  KAF
Sbjct:    2 GRQGNIHRVTGETEVRVAIGLDGSGQCEVSTGVPFLDHMLHQLASHGLFDLTISATGDTHIDDHHTNEDVGIALGQALGQALADRRGIHRFGHFVAPLDEALVQVALDCSGRPHVSYSLAIPAQKIGSYDTELVKEFFVAVANNAGLTLHIRQLDGVNSHHIVEACFKAF 171          

HSP 2 Score: 34.2686 bits (77), Expect = 3.043e-60
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR AT++ PRR   IP+ KG
Sbjct:  169 KAFARALRMATEIDPRRASAIPSSKG 194          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_MICAN (Imidazoleglycerol-phosphate dehydratase OS=Microcystis aeruginosa (strain NIES-843) GN=hisB PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 3.966e-60
Identity = 115/175 (65.71%), Postives = 132/175 (75.43%), Query Frame = 3
Query:  294 SAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            S V   R   V R TKET+V V I++DGSG   + T IPFLDHML Q+ASH   D+ VRATGDI IDDHHTNEDVG+ +G ALLQALGD+KGI RFG F APLDEAL+ V+LD SGRPHL+Y L+IPTQ+VGTY+TQLV   F +LVN S M   I+QL G NS HIIEAT KAF
Sbjct:   10 SFVSPCRRASVSRTTKETDVQVTIDLDGSGNCRAQTGIPFLDHMLQQIASHAAIDLDVRATGDIEIDDHHTNEDVGITLGQALLQALGDKKGIVRFGHFVAPLDEALVQVALDFSGRPHLSYGLEIPTQRVGTYDTQLVREFFVALVNHSQMTLHIRQLDGINSHHIIEATFKAF 184          

HSP 2 Score: 30.0314 bits (66), Expect = 3.966e-60
Identity = 14/26 (53.85%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARA+  A  + PRR G IP+ KG
Sbjct:  182 KAFARAMSMAIAIDPRRAGIIPSSKG 207          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROMM (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9313) GN=hisB PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 8.791e-60
Identity = 104/169 (61.54%), Postives = 133/169 (78.70%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R G+V RVT ET+V V++ +DG G  + ST + FLDHML QL+SHGL D+ + ATGD HIDDHHTNEDVG+A+G AL QALGDR+GI+RFG F APLDEAL+ V LD SGRPHL+Y LQIP +++G+Y+++LV+  F ++VN SG+   I+QLAG NS HI+EA  KAF
Sbjct:    8 RQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEITATGDTHIDDHHTNEDVGIAVGQALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPHLSYGLQIPAERIGSYDSELVKEFFVAVVNNSGLTLHIRQLAGTNSHHIVEACFKAF 176          

HSP 2 Score: 33.8834 bits (76), Expect = 8.791e-60
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR A ++ PRR G +P+ KG
Sbjct:  174 KAFARALRMAIEIDPRRAGAVPSSKG 199          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROM3 (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9303) GN=hisB PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 8.791e-60
Identity = 104/169 (61.54%), Postives = 133/169 (78.70%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R G+V RVT ET+V V++ +DG G  + ST + FLDHML QL+SHGL D+ + ATGD HIDDHHTNEDVG+A+G AL QALGDR+GI+RFG F APLDEAL+ V LD SGRPH +Y LQIP+Q++G+Y+++LV+  F ++VN SG+   I+QLAG NS HI+EA  KAF
Sbjct:    8 RQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEITATGDTHIDDHHTNEDVGIAVGQALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPHFSYGLQIPSQRIGSYDSELVKEFFVAVVNNSGLTLHIRQLAGTNSHHIVEACFKAF 176          

HSP 2 Score: 33.8834 bits (76), Expect = 8.791e-60
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR A ++ PRR G +P+ KG
Sbjct:  174 KAFARALRMAIEIDPRRAGAVPSSKG 199          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_GLOVI (Imidazoleglycerol-phosphate dehydratase OS=Gloeobacter violaceus GN=hisB PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 2.543e-59
Identity = 100/169 (59.17%), Postives = 132/169 (78.11%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            RI    R T+ET++ +++++DG+G   + T +PFLDHML Q+A+HGL D+ V A GD+HIDDHHTNEDVG+A G  L +ALGD++GI+RFG F APLDEAL+ V LDLSGRPHL+Y L+IPTQ+VG+Y+TQLV   +Q++VN S M   ++Q AG NS HIIEA+ KAF
Sbjct:    4 RIASTVRTTRETDIQIRLDLDGTGRVQAETGVPFLDHMLAQIATHGLIDIDVSAQGDLHIDDHHTNEDVGIAFGQCLAKALGDKRGISRFGHFAAPLDEALVQVVLDLSGRPHLSYGLEIPTQRVGSYDTQLVREFYQAVVNNSSMTLHLRQWAGINSHHIIEASFKAF 172          

HSP 2 Score: 34.6538 bits (78), Expect = 2.543e-59
Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR A ++ PRR G++P+ KG
Sbjct:  170 KAFARALRLAVEIDPRRAGSLPSSKG 195          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROMA (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus GN=hisB PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 3.312e-59
Identity = 107/169 (63.31%), Postives = 130/169 (76.92%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R  E+ RVT ET VSV++ +DGSG    S+ I FLDHML QL+SHGL D+ + A GD HIDDHHTNEDVG+A+G AL +ALG+RKGI RFG FTAPLDEAL+ V LD SGRPH+NY+L+IPTQK+GTY+T+LV   F +L N SG+   I+QL G NS HI+EA  KAF
Sbjct:    5 RQAEIHRVTNETEVSVRLGLDGSGRCKVSSGIAFLDHMLHQLSSHGLLDLELVAKGDTHIDDHHTNEDVGIALGQALSKALGNRKGIYRFGQFTAPLDEALVQVILDCSGRPHINYELEIPTQKIGTYDTELVREFFVALANNSGLTLHIRQLNGSNSHHIVEACFKAF 173          

HSP 2 Score: 31.5722 bits (70), Expect = 3.312e-59
Identity = 14/26 (53.85%), Postives = 19/26 (73.08%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FA++LR A +  PRR G+IP+ KG
Sbjct:  171 KAFAKSLRMAIEADPRRGGSIPSSKG 196          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_TRIEI (Imidazoleglycerol-phosphate dehydratase OS=Trichodesmium erythraeum (strain IMS101) GN=hisB PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.248e-58
Identity = 107/169 (63.31%), Postives = 128/169 (75.74%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R   VKR T ET+V+V +N+DG G   ++T IPFLDHML Q++SHGL D+ V+A GDI IDDHHTNEDVG+ +G AL QALGDRKGI RFG F APLDEAL+ V+LD SGRPHL+Y L++PTQ+VG Y+TQLV   F +L N S M   I+QL G NS HIIEA  KAF
Sbjct:   20 RRASVKRKTGETDVTVNLNLDGVGNCQANTGIPFLDHMLHQISSHGLIDLDVQAVGDIEIDDHHTNEDVGITLGQALKQALGDRKGIVRFGHFLAPLDEALVEVALDFSGRPHLSYGLEMPTQRVGNYDTQLVREFFVALANNSLMTLHIRQLGGINSHHIIEAGFKAF 188          

HSP 2 Score: 35.4242 bits (80), Expect = 1.248e-58
Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FAR+LR AT++ PRR G IP+ KG
Sbjct:  186 KAFARSLRMATEIDPRRVGEIPSSKG 211          
The following BLAST results are available for this feature:
BLAST of DY259991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_PROM41.053e-6063.31Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_SYNY31.372e-6065.68Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_SYNS31.373e-6062.13Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_SYNR33.043e-6062.35Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_MICAN3.966e-6065.71Imidazoleglycerol-phosphate dehydratase OS=Microcy... [more]
HIS7_PROMM8.791e-6061.54Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_PROM38.791e-6061.54Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_GLOVI2.543e-5959.17Imidazoleglycerol-phosphate dehydratase OS=Gloeoba... [more]
HIS7_PROMA3.312e-5963.31Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_TRIEI1.248e-5863.31Imidazoleglycerol-phosphate dehydratase OS=Trichod... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259991 ID=DY259991; Name=DY259991; organism=Citrus clementina; type=EST; length=917bp
GCTGCGTTTTGGCATATAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACA
TTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGT
TCACCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAA
AAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCC
TCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCC
AGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCG
TCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAAC
GTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCAC
TTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGC
TATTTGATGTGCACGTGAGGGCAACCGGAGACATTCACATTGATGATCAT
CATACCAATGAAGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAAGC
TCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTC
TTGATGAAGCTTTGATTCATGTTTCATTGGATTTATCTGGACGGCCACAT
TTAAATTATGATTTGCAAATTCCCACACAGAAAGTTGGAACTTACAACAC
TCAATTGGTGGAACCACTTTTCCAATCCTTGGTGAACACTTCTGGGATGG
ACCCTTCCATTCAACAGCTTGCTGGAAAAAATTCCTCTCACATTATTGAG
GCAACCCTCAAAGCTTTTTGCTAGGGCTCTCCGAAAAGCAACAAAATTAG
GACCCCGTCGCCGTGGAAATATACCCAACCTCAAAGGGGGTTCTCCAACA
TCTTGGAATCTCGACGG
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