DY259991

Overview
NameDY259991
Unique NameDY259991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1388 contig Ccv1_Contig1388:1..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SYNP6 (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hisB PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.991e-58
Identity = 102/169 (60.36%), Postives = 124/169 (73.37%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R   V R T ET+V V +N+DG+G   + T IPFLDHM DQ+ASHGL D+ + A GD+HIDDHHTNEDVG+  G AL +ALGDRKGI RFG F APLDEAL+ V+LD SGRPHL Y L +PT++VGTY TQLV   F ++ N + +   ++QL G NS HIIEAT KAF
Sbjct:   16 RQATVSRRTGETDVQVFLNLDGTGRCQADTGIPFLDHMFDQIASHGLIDLEITAKGDLHIDDHHTNEDVGITFGLALAEALGDRKGIVRFGHFVAPLDEALVQVALDFSGRPHLTYGLTLPTERVGTYETQLVREFFVAIANNAKLTLHLRQLDGINSHHIIEATFKAF 184          

HSP 2 Score: 35.8094 bits (81), Expect = 7.991e-58
Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FAR+LR AT++ PRR G IP+ KG
Sbjct:  182 KAFARSLRMATEVDPRRAGQIPSSKG 207          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SYNE7 (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus elongatus (strain PCC 7942) GN=hisB PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.991e-58
Identity = 102/169 (60.36%), Postives = 124/169 (73.37%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R   V R T ET+V V +N+DG+G   + T IPFLDHM DQ+ASHGL D+ + A GD+HIDDHHTNEDVG+  G AL +ALGDRKGI RFG F APLDEAL+ V+LD SGRPHL Y L +PT++VGTY TQLV   F ++ N + +   ++QL G NS HIIEAT KAF
Sbjct:   16 RQATVSRRTGETDVQVFLNLDGTGRCQADTGIPFLDHMFDQIASHGLIDLEITAKGDLHIDDHHTNEDVGITFGLALAEALGDRKGIVRFGHFVAPLDEALVQVALDFSGRPHLTYGLTLPTERVGTYETQLVREFFVAIANNAKLTLHLRQLDGINSHHIIEATFKAF 184          

HSP 2 Score: 35.8094 bits (81), Expect = 7.991e-58
Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FAR+LR AT++ PRR G IP+ KG
Sbjct:  182 KAFARSLRMATEVDPRRAGQIPSSKG 207          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROMT (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain NATL2A) GN=hisB PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 8.397e-58
Identity = 109/173 (63.01%), Postives = 137/173 (79.19%), Query Frame = 3
Query:  300 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            ++  R GE++R TKET+V VKI++DGSG   ++T I FLDHM+ QL+SHGLFD+ VRA GD HIDDHHTNEDVG+AIG AL +ALGDR GI RFG F APLDEALI V +D SGRPHL++ L IP+QKVGTY+T+LV+  F ++V+  G+   I+QLAG N+ HIIEAT K+F
Sbjct:    1 MEKTREGEIRRETKETDVFVKIDLDGSGKCSANTGIGFLDHMIQQLSSHGLFDIEVRANGDTHIDDHHTNEDVGIAIGQALSKALGDRVGIKRFGHFLAPLDEALIQVVVDCSGRPHLSFSLDIPSQKVGTYDTELVKEFFGAVVSNGGLTLHIRQLAGNNTHHIIEATFKSF 173          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROM1 (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain NATL1A) GN=hisB PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 8.397e-58
Identity = 109/173 (63.01%), Postives = 137/173 (79.19%), Query Frame = 3
Query:  300 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            ++  R GE++R TKET+V VKI++DGSG   ++T I FLDHM+ QL+SHGLFD+ VRA GD HIDDHHTNEDVG+AIG AL +ALGDR GI RFG F APLDEALI V +D SGRPHL++ L IP+QKVGTY+T+LV+  F ++V+  G+   I+QLAG N+ HIIEAT K+F
Sbjct:    1 MEKTREGEIRRETKETDVFVKIDLDGSGKCSANTGIGFLDHMIQQLSSHGLFDIEVRANGDTHIDDHHTNEDVGIAIGQALSKALGDRVGIKRFGHFLAPLDEALIQVVVDCSGRPHLSFSLDIPSQKVGTYDTELVKEFFGAVVSNGGLTLHIRQLAGNNTHHIIEATFKSF 173          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROM5 (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9515) GN=hisB PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.068e-56
Identity = 101/173 (58.38%), Postives = 134/173 (77.46%), Query Frame = 3
Query:  300 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            + S R  E+KR T ET++S+ IN+DG+G+++  T IPFLDHML Q++SHGLFD+ +RA GD HIDDHHTNEDVG+A+G A  +ALG+RKGINRFG F APLDEAL+ V+LD SGRPHL+Y L++   ++G Y+T+LV   F + VN+SG+   I Q+ G+NS HI+EA  KAF
Sbjct:    1 MSSSRQAEIKRKTNETDISIFINIDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIGDTHIDDHHTNEDVGIALGKAFTKALGERKGINRFGHFFAPLDEALVQVTLDCSGRPHLSYGLKLKAPRIGNYDTELVREFFIAFVNSSGITLHINQIEGRNSHHIVEACFKAF 173          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROMS (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain AS9601) GN=hisB PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.528e-56
Identity = 103/173 (59.54%), Postives = 133/173 (76.88%), Query Frame = 3
Query:  300 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            + S R  E+KR T ET++SV IN+DGSG+++  T IPFLDHML Q++SHGLFD+ ++A GD HIDDHHTNEDVG+A+G A  +ALG+RKGI+RFG F APLDEAL+ V+LD SGRPHL+YDLQ+   ++G Y+T+LV   F + VN SG+   I Q+ G NS HI+EA  KAF
Sbjct:    1 MSSLRQSEIKRKTNETDISVFINLDGSGISEIDTGIPFLDHMLHQISSHGLFDLQIKAIGDTHIDDHHTNEDVGIALGKAFSKALGERKGISRFGHFFAPLDEALVQVTLDCSGRPHLSYDLQLKAPRIGNYDTELVREFFIAFVNNSGITLHINQIRGSNSHHIVEACFKAF 173          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROM9 (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9312) GN=hisB PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.018e-56
Identity = 102/173 (58.96%), Postives = 134/173 (77.46%), Query Frame = 3
Query:  300 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            + S R  E+KR T ET++SV IN+DG+G+++  T IPFLDHML Q++SHGLFD+ ++A GD HIDDHHTNEDVG+A+G A  +ALG+RKGI+RFG F APLDEAL+ V+LD SGRPHL+YDLQ+   ++G Y+T+LV+  F + VN SG+   I Q+ G NS HI+EA  KAF
Sbjct:    1 MSSLRQSEIKRKTNETDISVLINLDGNGISEIETGIPFLDHMLHQISSHGLFDLKIKAIGDTHIDDHHTNEDVGIALGKAFSKALGERKGISRFGHFFAPLDEALVQVTLDCSGRPHLSYDLQLKAPRIGNYDTELVKEFFIAFVNNSGITLHINQIRGSNSHHIVEACFKAF 173          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROMP (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=hisB PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.859e-56
Identity = 102/173 (58.96%), Postives = 134/173 (77.46%), Query Frame = 3
Query:  300 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            + S R  E+KR T ET++SV IN+DG+G+++  T IPFLDHML Q++SHGLFD+ ++A GD HIDDHHTNEDVG+A+G A  +ALG+RKGI+RFG F APLDEAL+ V+LD SGRPHL+YDLQ+   ++G Y+T+LV+  F + VN SG+   I Q+ G NS HI+EA  KAF
Sbjct:    1 MSSLRQSEIKRKTNETDISVFINLDGNGISEIETGIPFLDHMLHQISSHGLFDLKIKAIGDTHIDDHHTNEDVGIALGKAFSKALGERKGISRFGHFFAPLDEALVQVTLDCSGRPHLSYDLQLKAPRIGNYDTELVKEFFIAFVNNSGITLHINQIRGSNSHHIVEACFKAF 173          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SYNJB (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. GN=hisB PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 9.465e-56
Identity = 100/180 (55.56%), Postives = 133/180 (73.89%), Query Frame = 3
Query:  279 SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            +A  SS +   R   V R T ET+V + +N+DGSG  +  T IPFLDHML QL++HGL D+ ++A GD+HIDDHHTNEDVG+ +G AL QAL DR+GI+RFG F APLDEAL+ V LD SGRPHL+Y L++PT+++G Y TQLV   +Q++VN + +   I+Q AG N+ HI+EA+ KAF
Sbjct:    2 TALDSSRLLQPRTASVHRRTGETDVQIHLNLDGSGRHEIDTGIPFLDHMLAQLSTHGLIDLQIKAIGDLHIDDHHTNEDVGITLGQALAQALQDRRGIHRFGHFWAPLDEALVQVVLDFSGRPHLSYGLELPTERIGRYETQLVREFYQAVVNHAQLTLHIRQAAGLNAHHIVEASFKAF 181          

HSP 2 Score: 31.5722 bits (70), Expect = 9.465e-56
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR A +  PRR+  IP+ KG
Sbjct:  179 KAFARALRMAVERDPRRQEGIPSSKG 204          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROM0 (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9301) GN=hisB PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.026e-55
Identity = 103/173 (59.54%), Postives = 133/173 (76.88%), Query Frame = 3
Query:  300 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            + S R  E+KR T ET++SV IN+DG+G+++  T IPFLDHML Q++SHGLFD+ +RA GD HIDDHHTNEDVG+A+G A  +ALG+RKGI RFG F APLDEAL+ V+LD SGRPHL+YDLQ+   ++G Y+T+LV+  F + VN SG+   I Q+ G NS HI+EA  KAF
Sbjct:    1 MSSLRQSEIKRKTNETDISVFINLDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIGDTHIDDHHTNEDVGIALGKAFSKALGERKGICRFGHFFAPLDEALVQVTLDCSGRPHLSYDLQLKAPRIGNYDTELVKEFFIAFVNNSGITLHINQIRGSNSHHIVEACFKAF 173          
The following BLAST results are available for this feature:
BLAST of DY259991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_SYNP67.991e-5860.36Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_SYNE77.991e-5860.36Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_PROMT8.397e-5863.01Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_PROM18.397e-5863.01Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_PROM52.068e-5658.38Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_PROMS3.528e-5659.54Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_PROM96.018e-5658.96Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_PROMP7.859e-5658.96Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_SYNJB9.465e-5655.56Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_PROM01.026e-5559.54Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259991 ID=DY259991; Name=DY259991; organism=Citrus clementina; type=EST; length=917bp
GCTGCGTTTTGGCATATAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACA
TTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGT
TCACCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAA
AAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCC
TCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCC
AGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCG
TCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAAC
GTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCAC
TTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGC
TATTTGATGTGCACGTGAGGGCAACCGGAGACATTCACATTGATGATCAT
CATACCAATGAAGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAAGC
TCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTC
TTGATGAAGCTTTGATTCATGTTTCATTGGATTTATCTGGACGGCCACAT
TTAAATTATGATTTGCAAATTCCCACACAGAAAGTTGGAACTTACAACAC
TCAATTGGTGGAACCACTTTTCCAATCCTTGGTGAACACTTCTGGGATGG
ACCCTTCCATTCAACAGCTTGCTGGAAAAAATTCCTCTCACATTATTGAG
GCAACCCTCAAAGCTTTTTGCTAGGGCTCTCCGAAAAGCAACAAAATTAG
GACCCCGTCGCCGTGGAAATATACCCAACCTCAAAGGGGGTTCTCCAACA
TCTTGGAATCTCGACGG
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