DY259991

Overview
NameDY259991
Unique NameDY259991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1388 contig Ccv1_Contig1388:1..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_ACIBS (Imidazoleglycerol-phosphate dehydratase OS=Acinetobacter baumannii (strain SDF) GN=hisB PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.622e-43
Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            RI EV R T ET + V++N+DG+G    +T +PFLDHM+DQ+  HGLFD+ +   GD+ IDDHHT ED G+ +G A  QALGD+KG+ R+G F APLDEAL  V +DLSGRP L  D+     ++GT++  L    FQ  VN + M   I  L GKNS H IE+  KA
Sbjct:    9 RISEVVRNTNETKIRVRLNLDGTGQGTLNTGVPFLDHMIDQIKQHGLFDIDIHCDGDLEIDDHHTVEDCGITLGQAFAQALGDKKGLRRYGHFYAPLDEALSRVVVDLSGRPGLFMDIPFTRARIGTFDVDLFSEFFQGFVNHALMTLHIDNLKGKNSHHQIESVFKA 176          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_RHIEC (Imidazoleglycerol-phosphate dehydratase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=hisB PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.319e-43
Identity = 77/170 (45.29%), Postives = 110/170 (64.71%), Query Frame = 3
Query:  306 SGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            + R G V R T ET++SV +N+DG+G +  ST + F DHMLDQL+ H L D+ + A GD+HIDDHHT ED G+AIG A+ +ALGDR+GI R+      +DE +   ++DLSGRP L +++     K+GT++T+LV   FQ+L   +G+   +    G N+ HI E   KA
Sbjct:    6 ASRTGSVARKTNETSISVSVNLDGTGKSKISTGVGFFDHMLDQLSRHSLIDMEIEAKGDLHIDDHHTVEDTGIAIGQAISKALGDRRGITRYASIDLAMDETMTKAAVDLSGRPFLVWNVAFSAPKIGTFDTELVREFFQALAQNAGITLHLLNHYGANNHHIAETCFKA 175          

HSP 2 Score: 33.113 bits (74), Expect = 3.319e-43
Identity = 14/26 (53.85%), Postives = 19/26 (73.08%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K  ARALR AT++ PR+ G +P+ KG
Sbjct:  174 KAVARALRTATEIDPRQAGRVPSTKG 199          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BURVG (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hisB PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.321e-43
Identity = 81/169 (47.93%), Postives = 110/169 (65.09%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+ EV R T ET + VK+++DG+G    +T +PFLDHMLDQ+A HGL D+ V A GD HIDDHHT EDVG+ +G A+ +A+GD+KGI R+G    PLDEAL  V +D SGRP L + +     ++GT++  L    F+  VN +G+   I  L G N+ H +E   KAF
Sbjct:    2 RVAEVVRNTSETQIRVKLDLDGTGRQKLATGVPFLDHMLDQIARHGLIDLEVEAHGDTHIDDHHTVEDVGITLGQAVAKAVGDKKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAHHQLETVFKAF 170          

HSP 2 Score: 29.6462 bits (65), Expect = 3.321e-43
Identity = 14/26 (53.85%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K F RALR A +L  R  G IP+ KG
Sbjct:  168 KAFGRALRAAVELDERAAGQIPSTKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BURTA (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=hisB PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.321e-43
Identity = 81/169 (47.93%), Postives = 110/169 (65.09%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+ EV R T ET + VKI++DG+G    +T +PFLDHMLDQ+A HGL D+ + A GD HIDDHHT EDVG+ +G A+ +A+GD+KGI R+G    PLDEAL  V +D SGRP L + +     ++GT++  L    F+  VN +G+   I  L G N+ H +E   KAF
Sbjct:    2 RVAEVVRNTSETQIRVKIDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLDIEAHGDTHIDDHHTVEDVGITLGQAVAKAVGDKKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAHHQLETVFKAF 170          

HSP 2 Score: 29.6462 bits (65), Expect = 3.321e-43
Identity = 14/26 (53.85%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K F RALR A +L  R  G IP+ KG
Sbjct:  168 KAFGRALRMAVELDERAAGQIPSTKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BURM1 (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=hisB PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.321e-43
Identity = 81/169 (47.93%), Postives = 110/169 (65.09%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+ EV R T ET + VK+++DG+G    +T +PFLDHMLDQ+A HGL D+ V A GD HIDDHHT EDVG+ +G A+ +A+GD+KGI R+G    PLDEAL  V +D SGRP L + +     ++GT++  L    F+  VN +G+   I  L G N+ H +E   KAF
Sbjct:    2 RVAEVVRNTSETQIRVKLDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLEVEAHGDTHIDDHHTVEDVGITLGQAVAKAIGDKKGIRRYGHAYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAHHQLETVFKAF 170          

HSP 2 Score: 29.6462 bits (65), Expect = 3.321e-43
Identity = 14/26 (53.85%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K F RALR A +L  R  G IP+ KG
Sbjct:  168 KAFGRALRAAVELDERAAGQIPSTKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_ACIBY (Imidazoleglycerol-phosphate dehydratase OS=Acinetobacter baumannii (strain AYE) GN=hisB PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.425e-43
Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            RI EV R T ET + V++N+DG+G    +T +PFLDHM+DQ+  HGLFD+ +   GD+ IDDHHT ED G+ +G A  QALGD+KG+ R+G F APLDEAL  V +DLSGRP L  D+     ++GT++  L    FQ  VN + M   I  L GKNS H IE+  KA
Sbjct:    9 RISEVVRNTNETKIRVRLNLDGTGQGTLNTGVPFLDHMIDQIKRHGLFDIDIHCDGDLEIDDHHTVEDCGITLGQAFAQALGDKKGLRRYGHFYAPLDEALSRVVVDLSGRPGLFMDIPFTRARIGTFDVDLFSEFFQGFVNHALMTLHIDNLKGKNSHHQIESVFKA 176          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_METPP (Imidazoleglycerol-phosphate dehydratase OS=Methylibium petroleiphilum (strain PM1) GN=hisB PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 4.326e-43
Identity = 82/172 (47.67%), Postives = 110/172 (63.95%), Query Frame = 3
Query:  303 DSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            +  R+ EV+R T ET + V++++DG+GVA  +T I F DHMLDQLA HGL D+ + A GD+HID HHT EDVG+ +G A  +A+GD+KG+ R+G    PLDEAL  V +D SGRP L+  +      +G  +TQLV   FQ  VN +G+   I  L G N+ H  E   KAF
Sbjct:    3 EPNRVAEVRRDTAETKIRVRVDLDGTGVARLATGIGFFDHMLDQLARHGLVDLEIEADGDLHIDGHHTVEDVGITLGQAFAKAVGDKKGLRRYGHAYVPLDEALSRVVVDFSGRPGLHMRVPFKAGMIGALDTQLVYEFFQGFVNHAGVTLHIDNLHGDNAHHQCETVFKAF 174          

HSP 2 Score: 30.4166 bits (67), Expect = 4.326e-43
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR A +  PR  G IP+ KG
Sbjct:  172 KAFARALRMALERDPRMAGVIPSTKG 197          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_THETN (Imidazoleglycerol-phosphate dehydratase OS=Thermoanaerobacter tengcongensis GN=hisB PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.473e-43
Identity = 85/168 (50.60%), Postives = 113/168 (67.26%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R  EVKR T ET++ V++N+DG G  D  T I F DHML   A HGLFD+ V A GD+ +D HHT EDVG+ +GTA L+A GD+K I RF  F  P+DEAL+ VSLD+SGRP+L YDL +  ++VG + T+ VE  F++     G+   ++ L G N+ HIIEA+ KA
Sbjct:    2 RKAEVKRKTAETDIYVELNIDGKGSYDIKTGIGFFDHMLSLFAKHGLFDLKVIAKGDLEVDTHHTVEDVGIVLGTAFLKASGDKKSIKRFSTFYVPMDEALVRVSLDISGRPYLYYDLPLKAERVGNFETETVEEFFRAFAYNFGITLHVELLHGVNTHHIIEASFKA 169          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_RHILW (Imidazoleglycerol-phosphate dehydratase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=hisB PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.636e-43
Identity = 77/170 (45.29%), Postives = 110/170 (64.71%), Query Frame = 3
Query:  306 SGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            + R G V R T ET++SV +N+DG+G +  ST + F DHMLDQL+ H L D+ + + GD+HIDDHHT ED G+AIG A+ +ALGDR+GI R+      +DE +   ++DLSGRP L +++     K+GT++T+LV   FQ+L   +G+   I    G N+ HI E   KA
Sbjct:    6 ASRTGSVSRKTNETSISVSVNLDGTGKSKISTGVGFFDHMLDQLSRHSLIDMEIESQGDLHIDDHHTVEDTGIAIGQAISKALGDRRGITRYASIDLAMDETMTKAAVDLSGRPFLVWNVAFSAPKIGTFDTELVREFFQALAQNAGITLHILNHYGANNHHIAETCFKA 175          

HSP 2 Score: 32.3426 bits (72), Expect = 5.636e-43
Identity = 14/26 (53.85%), Postives = 19/26 (73.08%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K  ARALR AT++ PR+ G +P+ KG
Sbjct:  174 KAVARALRTATEIDPRQVGRVPSTKG 199          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_AZOSE (Imidazoleglycerol-phosphate dehydratase OS=Azoarcus sp. (strain EbN1) GN=hisB PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 5.639e-43
Identity = 82/169 (48.52%), Postives = 110/169 (65.09%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R  EV R T ET ++ ++++DGSG A  +T +PFLDHMLDQ+A HG FD+ +RA GD HIDDHHT EDVG+ +G A  +ALGD++GI R+G    PLDEAL  V +D SGRP L+Y +     ++G+++  L    FQ  VN +G+   I  L G N+ H  E   KAF
Sbjct:    2 RQAEVTRDTLETRITARVDLDGSGKAAFATGVPFLDHMLDQIARHGAFDLDIRAEGDTHIDDHHTVEDVGITLGQAFARALGDKRGIRRYGHAYVPLDEALSRVVVDFSGRPGLHYFVSYTRARIGSFDVDLAREFFQGFVNHAGVTLHIDSLRGDNAHHQCETIFKAF 170          

HSP 2 Score: 26.5646 bits (57), Expect = 5.639e-43
Identity = 13/26 (50.00%), Postives = 15/26 (57.69%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K F RALR A +   R  G IP+ KG
Sbjct:  168 KAFGRALRMAAERDERAAGAIPSTKG 193          
The following BLAST results are available for this feature:
BLAST of DY259991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_ACIBS2.622e-4350.60Imidazoleglycerol-phosphate dehydratase OS=Acineto... [more]
HIS7_RHIEC3.319e-4345.29Imidazoleglycerol-phosphate dehydratase OS=Rhizobi... [more]
HIS7_BURVG3.321e-4347.93Imidazoleglycerol-phosphate dehydratase OS=Burkhol... [more]
HIS7_BURTA3.321e-4347.93Imidazoleglycerol-phosphate dehydratase OS=Burkhol... [more]
HIS7_BURM13.321e-4347.93Imidazoleglycerol-phosphate dehydratase OS=Burkhol... [more]
HIS7_ACIBY3.425e-4350.60Imidazoleglycerol-phosphate dehydratase OS=Acineto... [more]
HIS7_METPP4.326e-4347.67Imidazoleglycerol-phosphate dehydratase OS=Methyli... [more]
HIS7_THETN4.473e-4350.60Imidazoleglycerol-phosphate dehydratase OS=Thermoa... [more]
HIS7_RHILW5.636e-4345.29Imidazoleglycerol-phosphate dehydratase OS=Rhizobi... [more]
HIS7_AZOSE5.639e-4348.52Imidazoleglycerol-phosphate dehydratase OS=Azoarcu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259991 ID=DY259991; Name=DY259991; organism=Citrus clementina; type=EST; length=917bp
GCTGCGTTTTGGCATATAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACA
TTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGT
TCACCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAA
AAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCC
TCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCC
AGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCG
TCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAAC
GTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCAC
TTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGC
TATTTGATGTGCACGTGAGGGCAACCGGAGACATTCACATTGATGATCAT
CATACCAATGAAGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAAGC
TCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTC
TTGATGAAGCTTTGATTCATGTTTCATTGGATTTATCTGGACGGCCACAT
TTAAATTATGATTTGCAAATTCCCACACAGAAAGTTGGAACTTACAACAC
TCAATTGGTGGAACCACTTTTCCAATCCTTGGTGAACACTTCTGGGATGG
ACCCTTCCATTCAACAGCTTGCTGGAAAAAATTCCTCTCACATTATTGAG
GCAACCCTCAAAGCTTTTTGCTAGGGCTCTCCGAAAAGCAACAAAATTAG
GACCCCGTCGCCGTGGAAATATACCCAACCTCAAAGGGGGTTCTCCAACA
TCTTGGAATCTCGACGG
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